RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 RGL3Q3MIN7 710 aa20.6■□□□□ 0.89
TIMP1-205ENST00000456754 ZNF326Q5BKZ1 582 aaKnown RBP20.6■□□□□ 0.89
TIMP1-205ENST00000456754 NEXMIFQ5QGS0 1516 aa20.59■□□□□ 0.89
TIMP1-205ENST00000456754 TXNDC2Q86VQ3 553 aa20.58■□□□□ 0.89
TIMP1-205ENST00000456754 SCAF11Q99590 1463 aaKnown RBP20.57■□□□□ 0.88
TIMP1-205ENST00000456754 ANKLE2Q86XL3 938 aa20.56■□□□□ 0.88
TIMP1-205ENST00000456754 PPLO60437 1756 aa20.56■□□□□ 0.88
TIMP1-205ENST00000456754 IFT172Q9UG01 1749 aa20.55■□□□□ 0.88
TIMP1-205ENST00000456754 NEUROD1Q13562 356 aa20.54■□□□□ 0.88
TIMP1-205ENST00000456754 IQGAP1P46940 1657 aa20.53■□□□□ 0.88
TIMP1-205ENST00000456754 NPHP4O75161 1426 aaPredicted RBP20.53■□□□□ 0.88
TIMP1-205ENST00000456754 MED14O60244 1454 aa20.51■□□□□ 0.87
TIMP1-205ENST00000456754 EID1Q9Y6B2 187 aa20.51■□□□□ 0.87
TIMP1-205ENST00000456754 PPP1R15AO75807 674 aaPredicted RBP20.5■□□□□ 0.87
TIMP1-205ENST00000456754 NRXN3Q9Y4C0 1643 aa20.49■□□□□ 0.87
TIMP1-205ENST00000456754 ADGRF5Q8IZF2 1346 aa20.48■□□□□ 0.87
TIMP1-205ENST00000456754 CCER1Q8TC90 406 aaPredicted RBP20.47■□□□□ 0.87
TIMP1-205ENST00000456754 SLC26A8Q96RN1 970 aa20.47■□□□□ 0.87
TIMP1-205ENST00000456754 PLEKHG1Q9ULL1 1385 aa20.46■□□□□ 0.87
TIMP1-205ENST00000456754 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.45■□□□□ 0.86
TIMP1-205ENST00000456754 BCANQ96GW7 911 aa20.45■□□□□ 0.86
TIMP1-205ENST00000456754 KDM2AQ9Y2K7 1162 aa20.45■□□□□ 0.86
TIMP1-205ENST00000456754 RPGRIP1LQ68CZ1 1315 aa20.45■□□□□ 0.86
TIMP1-205ENST00000456754 ADAMTS13Q76LX8 1427 aa20.44■□□□□ 0.86
TIMP1-205ENST00000456754 DCAF11Q8TEB1 546 aa20.44■□□□□ 0.86
TIMP1-205ENST00000456754 L3MBTL2Q969R5 705 aa20.42■□□□□ 0.86
TIMP1-205ENST00000456754 SETBP1Q9Y6X0 1596 aa20.42■□□□□ 0.86
TIMP1-205ENST00000456754 STRCP1A6NGW2 1772 aa20.41■□□□□ 0.86
TIMP1-205ENST00000456754 HDGFP51858 240 aaKnown RBP20.41■□□□□ 0.86
TIMP1-205ENST00000456754 ZNF335Q9H4Z2 1342 aaPredicted RBP20.41■□□□□ 0.86
TIMP1-205ENST00000456754 SETD1AO15047 1707 aaKnown RBP20.41■□□□□ 0.86
TIMP1-205ENST00000456754 MYOM2P54296 1465 aa20.4■□□□□ 0.86
TIMP1-205ENST00000456754 DMRT2Q9Y5R5 561 aa20.4■□□□□ 0.86
TIMP1-205ENST00000456754 NRXN1Q9ULB1 1477 aa20.39■□□□□ 0.85
TIMP1-205ENST00000456754 VGFO15240 615 aaPredicted RBP20.39■□□□□ 0.85
TIMP1-205ENST00000456754 ALKQ9UM73 1620 aa20.38■□□□□ 0.85
TIMP1-205ENST00000456754 PIK3C2GO75747 1445 aa20.37■□□□□ 0.85
TIMP1-205ENST00000456754 METP08581 1390 aa20.35■□□□□ 0.85
TIMP1-205ENST00000456754 ASXL1Q8IXJ9 1541 aa20.35■□□□□ 0.85
TIMP1-205ENST00000456754 PTPRUQ92729 1446 aa20.35■□□□□ 0.85
TIMP1-205ENST00000456754 LTBP4Q8N2S1 1624 aa20.34■□□□□ 0.85
TIMP1-205ENST00000456754 DIP2AQ14689 1571 aa20.34■□□□□ 0.85
TIMP1-205ENST00000456754 TONSLQ96HA7 1378 aa20.34■□□□□ 0.85
TIMP1-205ENST00000456754 CFAP70Q5T0N1 1121 aa20.33■□□□□ 0.85
TIMP1-205ENST00000456754 TBX22Q9Y458 520 aa20.33■□□□□ 0.85
TIMP1-205ENST00000456754 CHD2O14647 1828 aaKnown RBP20.32■□□□□ 0.84
TIMP1-205ENST00000456754 CLSPNQ9HAW4 1339 aa20.32■□□□□ 0.84
TIMP1-205ENST00000456754 PRAG1Q86YV5 1406 aa20.31■□□□□ 0.84
TIMP1-205ENST00000456754 TMEM132EQ6IEE7 984 aa20.31■□□□□ 0.84
TIMP1-205ENST00000456754 NBPF8Q3BBV2 869 aa20.29■□□□□ 0.84
TIMP1-205ENST00000456754 RBM33Q96EV2 1170 aaKnown RBP20.29■□□□□ 0.84
TIMP1-205ENST00000456754 NWD1Q149M9 1564 aa20.29■□□□□ 0.84
TIMP1-205ENST00000456754 C14orf93Q9H972 538 aaKnown RBP20.28■□□□□ 0.84
TIMP1-205ENST00000456754 XRN1Q8IZH2 1706 aaKnown RBP20.27■□□□□ 0.83
TIMP1-205ENST00000456754 KCNA6P17658 529 aa20.26■□□□□ 0.83
TIMP1-205ENST00000456754 ADGRB1O14514 1584 aa20.25■□□□□ 0.83
TIMP1-205ENST00000456754 LAMC1P11047 1609 aa20.25■□□□□ 0.83
TIMP1-205ENST00000456754 NBPF1Q3BBV0 1214 aa20.25■□□□□ 0.83
TIMP1-205ENST00000456754 AMOTL2Q9Y2J4 779 aa20.25■□□□□ 0.83
TIMP1-205ENST00000456754 XIRP1Q702N8 1843 aaKnown RBP20.25■□□□□ 0.83
TIMP1-205ENST00000456754 STK26Q9P289 416 aa20.24■□□□□ 0.83
TIMP1-205ENST00000456754 TRPM1Q7Z4N2 1603 aa20.24■□□□□ 0.83
TIMP1-205ENST00000456754 LRRC7Q96NW7 1537 aa20.22■□□□□ 0.83
TIMP1-205ENST00000456754 PIK3R4Q99570 1358 aa20.21■□□□□ 0.83
TIMP1-205ENST00000456754 STAC3Q96MF2 364 aa20.21■□□□□ 0.83
TIMP1-205ENST00000456754 KIAA1210Q9ULL0 1709 aa20.21■□□□□ 0.83
TIMP1-205ENST00000456754 CPS1P31327 1500 aa20.2■□□□□ 0.82
TIMP1-205ENST00000456754 ROBO2Q9HCK4 1378 aa20.2■□□□□ 0.82
TIMP1-205ENST00000456754 YTHDC2Q9H6S0 1430 aaKnown RBP20.19■□□□□ 0.82
TIMP1-205ENST00000456754 LRPPRCP42704 1394 aaKnown RBP20.19■□□□□ 0.82
TIMP1-205ENST00000456754 NKTRP30414 1462 aaKnown RBP20.18■□□□□ 0.82
TIMP1-205ENST00000456754 KNDC1Q76NI1 1749 aa20.17■□□□□ 0.82
TIMP1-205ENST00000456754 PROSER2Q86WR7 435 aaPredicted RBP20.17■□□□□ 0.82
TIMP1-205ENST00000456754 TMEM94Q12767 1356 aa20.17■□□□□ 0.82
TIMP1-205ENST00000456754 PLEKHH1Q9ULM0 1364 aa20.17■□□□□ 0.82
TIMP1-205ENST00000456754 WAPLQ7Z5K2 1190 aa20.15■□□□□ 0.82
TIMP1-205ENST00000456754 CERKQ8TCT0 537 aa20.15■□□□□ 0.82
TIMP1-205ENST00000456754 TRAK1Q9UPV9 953 aa20.15■□□□□ 0.82
TIMP1-205ENST00000456754 RALGAPBQ86X10 1494 aa20.13■□□□□ 0.81
TIMP1-205ENST00000456754 TECPR2O15040 1411 aa20.13■□□□□ 0.81
TIMP1-205ENST00000456754 ABCC11Q96J66 1382 aa20.13■□□□□ 0.81
TIMP1-205ENST00000456754 ARHGEF28Q8N1W1 1705 aaKnown RBP20.13■□□□□ 0.81
TIMP1-205ENST00000456754 PTCH1Q13635 1447 aa20.12■□□□□ 0.81
TIMP1-205ENST00000456754 ROCK2O75116 1388 aaKnown RBP20.12■□□□□ 0.81
TIMP1-205ENST00000456754 NALCNQ8IZF0 1738 aa20.12■□□□□ 0.81
TIMP1-205ENST00000456754 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.11■□□□□ 0.81
TIMP1-205ENST00000456754 SAFB2Q14151 953 aaKnown RBP eCLIP20.11■□□□□ 0.81
TIMP1-205ENST00000456754 TIMELESSQ9UNS1 1208 aa20.11■□□□□ 0.81
TIMP1-205ENST00000456754 PRAM1Q96QH2 718 aa20.09■□□□□ 0.81
TIMP1-205ENST00000456754 DLC1Q96QB1 1528 aa20.08■□□□□ 0.81
TIMP1-205ENST00000456754 GPRASP1Q5JY77 1395 aa20.08■□□□□ 0.8
TIMP1-205ENST00000456754 C14orf37Q86TY3 774 aa20.06■□□□□ 0.8
TIMP1-205ENST00000456754 CARD11Q9BXL7 1154 aa20.05■□□□□ 0.8
TIMP1-205ENST00000456754 FAM135BQ49AJ0 1406 aa20.04■□□□□ 0.8
TIMP1-205ENST00000456754 ADGRL3Q9HAR2 1447 aa20.03■□□□□ 0.8
TIMP1-205ENST00000456754 POGKQ9P215 609 aa20.03■□□□□ 0.8
TIMP1-205ENST00000456754 MINK1Q8N4C8 1332 aaPredicted RBP20.02■□□□□ 0.79
TIMP1-205ENST00000456754 QRICH2Q9H0J4 1663 aa20.01■□□□□ 0.79
TIMP1-205ENST00000456754 IQSEC2Q5JU85 1478 aa20.01■□□□□ 0.79
TIMP1-205ENST00000456754 SIRT1Q96EB6 747 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms