RNA–Protein interactions for RNA: ENST00000456563.1

FAM239A-203, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 3

Gene FAM239A, Length 793 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-203ENST00000456563 EID1Q9Y6B2 187 aa26■■□□□ 1.75
FAM239A-203ENST00000456563 LTKP29376 864 aa25.99■■□□□ 1.75
FAM239A-203ENST00000456563 RGL3Q3MIN7 710 aa25.99■■□□□ 1.75
FAM239A-203ENST00000456563 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.99■■□□□ 1.75
FAM239A-203ENST00000456563 SCAF11Q99590 1463 aaKnown RBP25.98■■□□□ 1.75
FAM239A-203ENST00000456563 NCKAP5LQ9HCH0 1330 aa25.97■■□□□ 1.75
FAM239A-203ENST00000456563 CCER1Q8TC90 406 aaPredicted RBP25.97■■□□□ 1.75
FAM239A-203ENST00000456563 NEXMIFQ5QGS0 1516 aa25.95■■□□□ 1.74
FAM239A-203ENST00000456563 STRCQ7RTU9 1775 aa25.95■■□□□ 1.74
FAM239A-203ENST00000456563 NEUROD1Q13562 356 aa25.94■■□□□ 1.74
FAM239A-203ENST00000456563 MED14O60244 1454 aa25.93■■□□□ 1.74
FAM239A-203ENST00000456563 POLR1AO95602 1720 aaPredicted RBP25.91■■□□□ 1.74
FAM239A-203ENST00000456563 VGFO15240 615 aaPredicted RBP25.91■■□□□ 1.74
FAM239A-203ENST00000456563 PPP1R15AO75807 674 aaPredicted RBP25.91■■□□□ 1.74
FAM239A-203ENST00000456563 NUTM2DQ5VT03 806 aaPredicted RBP25.9■■□□□ 1.74
FAM239A-203ENST00000456563 NPHP4O75161 1426 aaPredicted RBP25.89■■□□□ 1.74
FAM239A-203ENST00000456563 DMRT2Q9Y5R5 561 aa25.89■■□□□ 1.74
FAM239A-203ENST00000456563 PLEKHG1Q9ULL1 1385 aa25.89■■□□□ 1.74
FAM239A-203ENST00000456563 STAC3Q96MF2 364 aa25.88■■□□□ 1.73
FAM239A-203ENST00000456563 PPLO60437 1756 aa25.87■■□□□ 1.73
FAM239A-203ENST00000456563 IFT172Q9UG01 1749 aa25.85■■□□□ 1.73
FAM239A-203ENST00000456563 DCAF11Q8TEB1 546 aa25.84■■□□□ 1.73
FAM239A-203ENST00000456563 MYOM2P54296 1465 aa25.84■■□□□ 1.73
FAM239A-203ENST00000456563 L3MBTL2Q969R5 705 aa25.83■■□□□ 1.73
FAM239A-203ENST00000456563 IQGAP1P46940 1657 aa25.82■■□□□ 1.72
FAM239A-203ENST00000456563 ADGRF5Q8IZF2 1346 aa25.82■■□□□ 1.72
FAM239A-203ENST00000456563 TONSLQ96HA7 1378 aa25.8■■□□□ 1.72
FAM239A-203ENST00000456563 NRXN1Q9ULB1 1477 aa25.79■■□□□ 1.72
FAM239A-203ENST00000456563 SETBP1Q9Y6X0 1596 aa25.79■■□□□ 1.72
FAM239A-203ENST00000456563 BCANQ96GW7 911 aa25.79■■□□□ 1.72
FAM239A-203ENST00000456563 KDM2AQ9Y2K7 1162 aa25.79■■□□□ 1.72
FAM239A-203ENST00000456563 ADAMTS13Q76LX8 1427 aa25.78■■□□□ 1.72
FAM239A-203ENST00000456563 TBX22Q9Y458 520 aa25.77■■□□□ 1.72
FAM239A-203ENST00000456563 SLC26A8Q96RN1 970 aa25.76■■□□□ 1.71
FAM239A-203ENST00000456563 TIMELESSQ9UNS1 1208 aa25.76■■□□□ 1.71
FAM239A-203ENST00000456563 PIK3C2GO75747 1445 aa25.76■■□□□ 1.71
FAM239A-203ENST00000456563 NRXN3Q9Y4C0 1643 aa25.75■■□□□ 1.71
FAM239A-203ENST00000456563 SENP3Q9H4L4 574 aaPredicted RBP25.75■■□□□ 1.71
FAM239A-203ENST00000456563 DIP2AQ14689 1571 aa25.73■■□□□ 1.71
FAM239A-203ENST00000456563 C14orf93Q9H972 538 aaKnown RBP25.7■■□□□ 1.7
FAM239A-203ENST00000456563 ALKQ9UM73 1620 aa25.7■■□□□ 1.7
FAM239A-203ENST00000456563 PRAG1Q86YV5 1406 aa25.69■■□□□ 1.7
FAM239A-203ENST00000456563 PIK3R4Q99570 1358 aa25.68■■□□□ 1.7
FAM239A-203ENST00000456563 CFAP70Q5T0N1 1121 aa25.66■■□□□ 1.7
FAM239A-203ENST00000456563 METP08581 1390 aa25.65■■□□□ 1.7
FAM239A-203ENST00000456563 SETD1AO15047 1707 aaKnown RBP25.64■■□□□ 1.7
FAM239A-203ENST00000456563 LAMC1P11047 1609 aa25.63■■□□□ 1.69
FAM239A-203ENST00000456563 ZNF335Q9H4Z2 1342 aaPredicted RBP25.63■■□□□ 1.69
FAM239A-203ENST00000456563 KCNA6P17658 529 aa25.62■■□□□ 1.69
FAM239A-203ENST00000456563 NBPF8Q3BBV2 869 aa25.61■■□□□ 1.69
FAM239A-203ENST00000456563 PTPRUQ92729 1446 aa25.6■■□□□ 1.69
FAM239A-203ENST00000456563 KIAA1210Q9ULL0 1709 aa25.58■■□□□ 1.69
FAM239A-203ENST00000456563 ASXL1Q8IXJ9 1541 aa25.58■■□□□ 1.68
FAM239A-203ENST00000456563 NWD1Q149M9 1564 aa25.57■■□□□ 1.68
FAM239A-203ENST00000456563 TMEM132EQ6IEE7 984 aa25.57■■□□□ 1.68
FAM239A-203ENST00000456563 AMOTL2Q9Y2J4 779 aa25.57■■□□□ 1.68
FAM239A-203ENST00000456563 CHD2O14647 1828 aaKnown RBP25.57■■□□□ 1.68
FAM239A-203ENST00000456563 ADGRB1O14514 1584 aa25.56■■□□□ 1.68
FAM239A-203ENST00000456563 LTBP4Q8N2S1 1624 aa25.55■■□□□ 1.68
FAM239A-203ENST00000456563 LRPPRCP42704 1394 aaKnown RBP25.54■■□□□ 1.68
FAM239A-203ENST00000456563 NBPF1Q3BBV0 1214 aa25.53■■□□□ 1.68
FAM239A-203ENST00000456563 STRCP1A6NGW2 1772 aa25.53■■□□□ 1.68
FAM239A-203ENST00000456563 YTHDC2Q9H6S0 1430 aaKnown RBP25.53■■□□□ 1.68
FAM239A-203ENST00000456563 NKTRP30414 1462 aaKnown RBP25.53■■□□□ 1.68
FAM239A-203ENST00000456563 CPS1P31327 1500 aa25.53■■□□□ 1.68
FAM239A-203ENST00000456563 TRPM1Q7Z4N2 1603 aa25.52■■□□□ 1.68
FAM239A-203ENST00000456563 XRN1Q8IZH2 1706 aaKnown RBP25.52■■□□□ 1.68
FAM239A-203ENST00000456563 ABCC11Q96J66 1382 aa25.52■■□□□ 1.68
FAM239A-203ENST00000456563 TECPR2O15040 1411 aa25.5■■□□□ 1.67
FAM239A-203ENST00000456563 RALGAPBQ86X10 1494 aa25.49■■□□□ 1.67
FAM239A-203ENST00000456563 ROCK2O75116 1388 aaKnown RBP25.48■■□□□ 1.67
FAM239A-203ENST00000456563 STK26Q9P289 416 aa25.48■■□□□ 1.67
FAM239A-203ENST00000456563 PTCH1Q13635 1447 aa25.47■■□□□ 1.67
FAM239A-203ENST00000456563 GPRASP1Q5JY77 1395 aa25.47■■□□□ 1.67
FAM239A-203ENST00000456563 PROSER2Q86WR7 435 aaPredicted RBP25.46■■□□□ 1.67
FAM239A-203ENST00000456563 SIRT1Q96EB6 747 aa25.46■■□□□ 1.67
FAM239A-203ENST00000456563 LRRC7Q96NW7 1537 aa25.46■■□□□ 1.67
FAM239A-203ENST00000456563 ROBO2Q9HCK4 1378 aa25.44■■□□□ 1.66
FAM239A-203ENST00000456563 KNDC1Q76NI1 1749 aa25.44■■□□□ 1.66
FAM239A-203ENST00000456563 DLC1Q96QB1 1528 aa25.43■■□□□ 1.66
FAM239A-203ENST00000456563 TRAK1Q9UPV9 953 aa25.43■■□□□ 1.66
FAM239A-203ENST00000456563 FAM135BQ49AJ0 1406 aa25.42■■□□□ 1.66
FAM239A-203ENST00000456563 NCOA3Q9Y6Q9 1424 aa25.42■■□□□ 1.66
FAM239A-203ENST00000456563 TMEM94Q12767 1356 aa25.42■■□□□ 1.66
FAM239A-203ENST00000456563 CARD11Q9BXL7 1154 aa25.4■■□□□ 1.66
FAM239A-203ENST00000456563 CERKQ8TCT0 537 aa25.38■■□□□ 1.65
FAM239A-203ENST00000456563 WAPLQ7Z5K2 1190 aa25.37■■□□□ 1.65
FAM239A-203ENST00000456563 RBM33Q96EV2 1170 aaKnown RBP25.37■■□□□ 1.65
FAM239A-203ENST00000456563 IQSEC2Q5JU85 1478 aa25.36■■□□□ 1.65
FAM239A-203ENST00000456563 PRAM1Q96QH2 718 aa25.36■■□□□ 1.65
FAM239A-203ENST00000456563 PLEKHH1Q9ULM0 1364 aa25.35■■□□□ 1.65
FAM239A-203ENST00000456563 POGKQ9P215 609 aa25.34■■□□□ 1.65
FAM239A-203ENST00000456563 ARHGEF28Q8N1W1 1705 aaKnown RBP25.33■■□□□ 1.65
FAM239A-203ENST00000456563 XIRP1Q702N8 1843 aaKnown RBP25.33■■□□□ 1.64
FAM239A-203ENST00000456563 ZEB1P37275 1124 aaPredicted RBP25.31■■□□□ 1.64
FAM239A-203ENST00000456563 C19orf44Q9H6X5 657 aa25.31■■□□□ 1.64
FAM239A-203ENST00000456563 EIF3AQ14152 1382 aaKnown RBP25.31■■□□□ 1.64
FAM239A-203ENST00000456563 ADGRL3Q9HAR2 1447 aa25.3■■□□□ 1.64
FAM239A-203ENST00000456563 C14orf37Q86TY3 774 aa25.3■■□□□ 1.64
FAM239A-203ENST00000456563 CENPJQ9HC77 1338 aaPredicted RBP25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms