RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 TAF7LQ5H9L4 462 aa15.05■□□□□ -0
NEDD4L-208ENST00000456173 CLCN1P35523 988 aa15.04■□□□□ -0
NEDD4L-208ENST00000456173 FHAD1B1AJZ9 1412 aa15.04■□□□□ -0
NEDD4L-208ENST00000456173 PLCD3Q8N3E9 789 aa15.04■□□□□ -0
NEDD4L-208ENST00000456173 RDXP35241 583 aaKnown RBP15.04■□□□□ -0
NEDD4L-208ENST00000456173 PLEKHD1A6NEE1 506 aa15.04■□□□□ -0
NEDD4L-208ENST00000456173 SLC4A10Q6U841 1118 aa15.04■□□□□ -0
NEDD4L-208ENST00000456173 LEKR1Q6ZMV7 388 aa15.04■□□□□ -0
NEDD4L-208ENST00000456173 H3BQV1 296 aa15.03■□□□□ -0
NEDD4L-208ENST00000456173 HSP90AB3PQ58FF7 597 aa15.03■□□□□ -0
NEDD4L-208ENST00000456173 IFFO2Q5TF58 517 aa15.03■□□□□ -0
NEDD4L-208ENST00000456173 PLPPR3Q6T4P5 718 aa15.03■□□□□ -0
NEDD4L-208ENST00000456173 CCDC112Q8NEF3 446 aa15.03■□□□□ -0
NEDD4L-208ENST00000456173 BICD2Q8TD16 824 aa15.03■□□□□ -0
NEDD4L-208ENST00000456173 SMARCA4P51532 1647 aa15.03■□□□□ -0
NEDD4L-208ENST00000456173 TRIM5Q9C035 493 aa15.03■□□□□ -0
NEDD4L-208ENST00000456173 HAP1P54257 671 aaPredicted RBP15.03■□□□□ -0
NEDD4L-208ENST00000456173 SASS6Q6UVJ0 657 aa15.03■□□□□ -0
NEDD4L-208ENST00000456173 ESF1Q9H501 851 aaKnown RBP15.03■□□□□ -0
NEDD4L-208ENST00000456173 REC8O95072 547 aa15.03■□□□□ -0
NEDD4L-208ENST00000456173 CCDC7Q96M83 1385 aa15.02■□□□□ -0
NEDD4L-208ENST00000456173 KIF7Q2M1P5 1343 aa15.02■□□□□ -0
NEDD4L-208ENST00000456173 SPDYE4A6NLX3 237 aa15.02■□□□□ -0
NEDD4L-208ENST00000456173 ELL2O00472 640 aaPredicted RBP15.02■□□□□ -0
NEDD4L-208ENST00000456173 SAFB2Q14151 953 aaKnown RBP eCLIP15.02■□□□□ -0
NEDD4L-208ENST00000456173 VPS37CA5D8V6 355 aaPredicted RBP15.02□□□□□ -0.01
NEDD4L-208ENST00000456173 MBD3O95983 291 aa15.02□□□□□ -0.01
NEDD4L-208ENST00000456173 CNTLNQ9NXG0 1405 aa15.01□□□□□ -0.01
NEDD4L-208ENST00000456173 PPP4R3BQ5MIZ7 849 aa15□□□□□ -0.01
NEDD4L-208ENST00000456173 DZIP1LQ8IYY4 767 aaKnown RBP15□□□□□ -0.01
NEDD4L-208ENST00000456173 DEF6Q9H4E7 631 aa15□□□□□ -0.01
NEDD4L-208ENST00000456173 TDRD9Q8NDG6 1382 aaKnown RBP15□□□□□ -0.01
NEDD4L-208ENST00000456173 PDZRN3Q9UPQ7 1066 aa15□□□□□ -0.01
NEDD4L-208ENST00000456173 PES1O00541 588 aaKnown RBP15□□□□□ -0.01
NEDD4L-208ENST00000456173 DDX19BQ9UMR2 479 aa14.99□□□□□ -0.01
NEDD4L-208ENST00000456173 SOX12O15370 315 aa14.99□□□□□ -0.01
NEDD4L-208ENST00000456173 PANK2Q9BZ23 570 aa14.99□□□□□ -0.01
NEDD4L-208ENST00000456173 CADPSQ9ULU8 1353 aa14.98□□□□□ -0.01
NEDD4L-208ENST00000456173 SRPK2P78362 688 aaKnown RBP14.98□□□□□ -0.01
NEDD4L-208ENST00000456173 AK7Q96M32 723 aa14.98□□□□□ -0.01
NEDD4L-208ENST00000456173 ACBD3Q9H3P7 528 aa14.98□□□□□ -0.01
NEDD4L-208ENST00000456173 CCDC70Q6NSX1 233 aa14.98□□□□□ -0.01
NEDD4L-208ENST00000456173 FAM184AQ8NB25 1140 aa14.97□□□□□ -0.01
NEDD4L-208ENST00000456173 ANO2Q9NQ90 1003 aa14.97□□□□□ -0.01
NEDD4L-208ENST00000456173 XRCC6P12956 609 aaKnown RBP eCLIP14.97□□□□□ -0.01
NEDD4L-208ENST00000456173 USP47Q96K76 1375 aa14.97□□□□□ -0.01
NEDD4L-208ENST00000456173 GPATCH11Q8N954 259 aa14.97□□□□□ -0.01
NEDD4L-208ENST00000456173 TOP2AP11388 1531 aaKnown RBP14.96□□□□□ -0.01
NEDD4L-208ENST00000456173 SMC3Q9UQE7 1217 aa14.96□□□□□ -0.01
NEDD4L-208ENST00000456173 CUX2O14529 1486 aa14.96□□□□□ -0.01
NEDD4L-208ENST00000456173 A0A0G2JS52 829 aa14.96□□□□□ -0.02
NEDD4L-208ENST00000456173 CCDC34Q96HJ3 373 aa14.95□□□□□ -0.02
NEDD4L-208ENST00000456173 SMG6Q86US8 1419 aaKnown RBP14.95□□□□□ -0.02
NEDD4L-208ENST00000456173 CALCOCO1Q9P1Z2 691 aa14.95□□□□□ -0.02
NEDD4L-208ENST00000456173 CCDC27Q2M243 656 aa14.95□□□□□ -0.02
NEDD4L-208ENST00000456173 TSPYL1Q9H0U9 437 aa14.94□□□□□ -0.02
NEDD4L-208ENST00000456173 INTS3Q68E01 1043 aaKnown RBP14.94□□□□□ -0.02
NEDD4L-208ENST00000456173 RTF1Q92541 710 aaKnown RBP14.94□□□□□ -0.02
NEDD4L-208ENST00000456173 RUFY1Q96T51 708 aa14.94□□□□□ -0.02
NEDD4L-208ENST00000456173 DYNC1I1O14576 645 aa14.93□□□□□ -0.02
NEDD4L-208ENST00000456173 RBM25P49756 843 aaKnown RBP14.93□□□□□ -0.02
NEDD4L-208ENST00000456173 RRAGDQ9NQL2 400 aaPredicted RBP14.93□□□□□ -0.02
NEDD4L-208ENST00000456173 TSR1Q2NL82 804 aaKnown RBP14.93□□□□□ -0.02
NEDD4L-208ENST00000456173 SYCE3A1L190 88 aa14.93□□□□□ -0.02
NEDD4L-208ENST00000456173 TPM1P09493 284 aa14.93□□□□□ -0.02
NEDD4L-208ENST00000456173 NPM1P06748 294 aaKnown RBP eCLIP14.92□□□□□ -0.02
NEDD4L-208ENST00000456173 PDS5BQ9NTI5 1447 aa14.92□□□□□ -0.02
NEDD4L-208ENST00000456173 IGSF3O75054 1194 aa14.92□□□□□ -0.02
NEDD4L-208ENST00000456173 PLCD4Q9BRC7 762 aa14.92□□□□□ -0.02
NEDD4L-208ENST00000456173 NUP155O75694 1391 aa14.92□□□□□ -0.02
NEDD4L-208ENST00000456173 FIBPO43427 364 aa14.92□□□□□ -0.02
NEDD4L-208ENST00000456173 EIF4G1Q04637 1599 aaKnown RBP14.91□□□□□ -0.02
NEDD4L-208ENST00000456173 CDC45O75419 566 aa14.91□□□□□ -0.02
NEDD4L-208ENST00000456173 DHX37Q8IY37 1157 aaKnown RBP14.91□□□□□ -0.02
NEDD4L-208ENST00000456173 K7ELQ4 463 aaPredicted RBP14.91□□□□□ -0.02
NEDD4L-208ENST00000456173 LETM1O95202 739 aaPredicted RBP14.91□□□□□ -0.02
NEDD4L-208ENST00000456173 PDIA4P13667 645 aaKnown RBP14.91□□□□□ -0.02
NEDD4L-208ENST00000456173 IPO4Q8TEX9 1081 aaKnown RBP14.91□□□□□ -0.02
NEDD4L-208ENST00000456173 GPATCH3Q96I76 525 aa14.91□□□□□ -0.02
NEDD4L-208ENST00000456173 ADAMTS8Q9UP79 889 aa14.91□□□□□ -0.02
NEDD4L-208ENST00000456173 BCAR3O75815 825 aa14.9□□□□□ -0.02
NEDD4L-208ENST00000456173 STK31Q9BXU1 1019 aa14.9□□□□□ -0.02
NEDD4L-208ENST00000456173 GTF2F1P35269 517 aaKnown RBP eCLIP14.9□□□□□ -0.022e-7■■■■□ 23.8
NEDD4L-208ENST00000456173 NEK4P51957 841 aa14.9□□□□□ -0.02
NEDD4L-208ENST00000456173 IRX3P78415 501 aaPredicted RBP14.9□□□□□ -0.02
NEDD4L-208ENST00000456173 EIF3AQ14152 1382 aaKnown RBP14.9□□□□□ -0.02
NEDD4L-208ENST00000456173 AXDND1Q5T1B0 1012 aaPredicted RBP14.9□□□□□ -0.02
NEDD4L-208ENST00000456173 RASSF8Q8NHQ8 419 aa14.89□□□□□ -0.03
NEDD4L-208ENST00000456173 TIGD1Q96MW7 591 aa14.89□□□□□ -0.03
NEDD4L-208ENST00000456173 TTLL5Q6EMB2 1281 aa14.88□□□□□ -0.03
NEDD4L-208ENST00000456173 PDILTQ8N807 584 aa14.88□□□□□ -0.03
NEDD4L-208ENST00000456173 CIZ1Q9ULV3 898 aaPredicted RBP14.88□□□□□ -0.03
NEDD4L-208ENST00000456173 VGLL3A8MV65 326 aa14.88□□□□□ -0.03
NEDD4L-208ENST00000456173 CLSTN1O94985 981 aa14.87□□□□□ -0.03
NEDD4L-208ENST00000456173 FOSBP53539 338 aa14.87□□□□□ -0.03
NEDD4L-208ENST00000456173 CCDC73Q6ZRK6 1079 aa14.87□□□□□ -0.03
NEDD4L-208ENST00000456173 TBC1D2Q9BYX2 928 aa14.87□□□□□ -0.03
NEDD4L-208ENST00000456173 WASHC2CQ9Y4E1 1318 aa14.87□□□□□ -0.03
NEDD4L-208ENST00000456173 TNNT1P13805 278 aa14.87□□□□□ -0.03
NEDD4L-208ENST00000456173 RABEP1Q15276 862 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms