RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 SLC52A1Q9NWF4 448 aa19.81■□□□□ 0.76
TREX1-203ENST00000456089 ROCK1Q13464 1354 aa19.81■□□□□ 0.76
TREX1-203ENST00000456089 SOCS7O14512 581 aa19.8■□□□□ 0.76
TREX1-203ENST00000456089 BCANQ96GW7 911 aa19.8■□□□□ 0.76
TREX1-203ENST00000456089 ZFYVE9O95405 1425 aa19.78■□□□□ 0.76
TREX1-203ENST00000456089 CHGAP10645 457 aaKnown RBP19.78■□□□□ 0.76
TREX1-203ENST00000456089 CHD2O14647 1828 aaKnown RBP19.78■□□□□ 0.76
TREX1-203ENST00000456089 RIMS2Q9UQ26 1411 aa19.77■□□□□ 0.76
TREX1-203ENST00000456089 TMEM94Q12767 1356 aa19.77■□□□□ 0.76
TREX1-203ENST00000456089 NWD1Q149M9 1564 aa19.76■□□□□ 0.75
TREX1-203ENST00000456089 NUP155O75694 1391 aa19.76■□□□□ 0.75
TREX1-203ENST00000456089 NUTM2DQ5VT03 806 aaPredicted RBP19.76■□□□□ 0.75
TREX1-203ENST00000456089 KCNA6P17658 529 aa19.75■□□□□ 0.75
TREX1-203ENST00000456089 PROSER2Q86WR7 435 aaPredicted RBP19.75■□□□□ 0.75
TREX1-203ENST00000456089 PPP1R15AO75807 674 aaPredicted RBP19.74■□□□□ 0.75
TREX1-203ENST00000456089 SPHKAPQ2M3C7 1700 aa19.73■□□□□ 0.75
TREX1-203ENST00000456089 ROBO1Q9Y6N7 1651 aa19.72■□□□□ 0.75
TREX1-203ENST00000456089 PLEKHG1Q9ULL1 1385 aa19.71■□□□□ 0.75
TREX1-203ENST00000456089 NKTRP30414 1462 aaKnown RBP19.7■□□□□ 0.74
TREX1-203ENST00000456089 PHF23Q9BUL5 403 aaPredicted RBP19.66■□□□□ 0.74
TREX1-203ENST00000456089 RRBP1Q9P2E9 1410 aaKnown RBP19.66■□□□□ 0.74
TREX1-203ENST00000456089 ADAMTS13Q76LX8 1427 aa19.65■□□□□ 0.74
TREX1-203ENST00000456089 HDGFP51858 240 aaKnown RBP19.64■□□□□ 0.73
TREX1-203ENST00000456089 FAM135BQ49AJ0 1406 aa19.64■□□□□ 0.73
TREX1-203ENST00000456089 CLTCL1P53675 1640 aa19.63■□□□□ 0.73
TREX1-203ENST00000456089 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.63■□□□□ 0.73
TREX1-203ENST00000456089 PHLPP1O60346 1717 aa19.62■□□□□ 0.73
TREX1-203ENST00000456089 NRXN3Q9Y4C0 1643 aa19.62■□□□□ 0.73
TREX1-203ENST00000456089 MSH6P52701 1360 aa19.62■□□□□ 0.73
TREX1-203ENST00000456089 TBX22Q9Y458 520 aa19.62■□□□□ 0.73
TREX1-203ENST00000456089 DIP2AQ14689 1571 aa19.61■□□□□ 0.73
TREX1-203ENST00000456089 NAIPQ13075 1403 aa19.6■□□□□ 0.73
TREX1-203ENST00000456089 KIF1BO60333 1816 aa19.6■□□□□ 0.73
TREX1-203ENST00000456089 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.6■□□□□ 0.73
TREX1-203ENST00000456089 TRPM2O94759 1503 aa19.59■□□□□ 0.73
TREX1-203ENST00000456089 PTPRUQ92729 1446 aa19.58■□□□□ 0.72
TREX1-203ENST00000456089 ZNF326Q5BKZ1 582 aaKnown RBP19.57■□□□□ 0.72
TREX1-203ENST00000456089 C14orf37Q86TY3 774 aa19.57■□□□□ 0.72
TREX1-203ENST00000456089 SLAIN2Q9P270 581 aa19.57■□□□□ 0.72
TREX1-203ENST00000456089 XRN1Q8IZH2 1706 aaKnown RBP19.54■□□□□ 0.72
TREX1-203ENST00000456089 SETBP1Q9Y6X0 1596 aa19.54■□□□□ 0.72
TREX1-203ENST00000456089 RGS17Q9UGC6 210 aaPredicted RBP19.54■□□□□ 0.72
TREX1-203ENST00000456089 NEXMIFQ5QGS0 1516 aa19.54■□□□□ 0.72
TREX1-203ENST00000456089 TRIM52Q96A61 297 aa19.53■□□□□ 0.72
TREX1-203ENST00000456089 AMOTL2Q9Y2J4 779 aa19.53■□□□□ 0.72
TREX1-203ENST00000456089 COL16A1Q07092 1604 aaPredicted RBP19.51■□□□□ 0.71
TREX1-203ENST00000456089 PIK3R4Q99570 1358 aa19.51■□□□□ 0.71
TREX1-203ENST00000456089 HFM1A2PYH4 1435 aa19.5■□□□□ 0.71
TREX1-203ENST00000456089 METP08581 1390 aa19.49■□□□□ 0.71
TREX1-203ENST00000456089 NCOA3Q9Y6Q9 1424 aa19.49■□□□□ 0.71
TREX1-203ENST00000456089 ATF3P18847 181 aa19.47■□□□□ 0.71
TREX1-203ENST00000456089 C19orf44Q9H6X5 657 aa19.47■□□□□ 0.71
TREX1-203ENST00000456089 SETD1AO15047 1707 aaKnown RBP19.47■□□□□ 0.71
TREX1-203ENST00000456089 NALCNQ8IZF0 1738 aa19.46■□□□□ 0.71
TREX1-203ENST00000456089 PPLO60437 1756 aa19.45■□□□□ 0.7
TREX1-203ENST00000456089 FOXD1Q16676 465 aa19.45■□□□□ 0.7
TREX1-203ENST00000456089 CADPS2Q86UW7 1296 aa19.45■□□□□ 0.7
TREX1-203ENST00000456089 POTEAQ6S8J7 498 aa19.44■□□□□ 0.7
TREX1-203ENST00000456089 SLC4A1APQ9BWU0 796 aaKnown RBP19.44■□□□□ 0.7
TREX1-203ENST00000456089 AHDC1Q5TGY3 1603 aaPredicted RBP19.43■□□□□ 0.7
TREX1-203ENST00000456089 JCADQ9P266 1359 aa19.43■□□□□ 0.7
TREX1-203ENST00000456089 SHPRHQ149N8 1683 aa19.41■□□□□ 0.7
TREX1-203ENST00000456089 LRP6O75581 1613 aa19.4■□□□□ 0.7
TREX1-203ENST00000456089 BRINP3Q76B58 766 aa19.4■□□□□ 0.7
TREX1-203ENST00000456089 ASXL1Q8IXJ9 1541 aa19.39■□□□□ 0.69
TREX1-203ENST00000456089 NHSL1Q5SYE7 1610 aa19.39■□□□□ 0.69
TREX1-203ENST00000456089 MST1RQ04912 1400 aa19.38■□□□□ 0.69
TREX1-203ENST00000456089 DCCP43146 1447 aa19.37■□□□□ 0.69
TREX1-203ENST00000456089 ADGRL3Q9HAR2 1447 aa19.36■□□□□ 0.69
TREX1-203ENST00000456089 DDX17Q92841 729 aaKnown RBP19.35■□□□□ 0.69
TREX1-203ENST00000456089 IFT172Q9UG01 1749 aa19.34■□□□□ 0.69
TREX1-203ENST00000456089 VGFO15240 615 aaPredicted RBP19.34■□□□□ 0.69
TREX1-203ENST00000456089 ROBO2Q9HCK4 1378 aa19.33■□□□□ 0.69
TREX1-203ENST00000456089 NUTM2BA6NNL0 878 aaPredicted RBP19.32■□□□□ 0.68
TREX1-203ENST00000456089 NUTM2EB1AL46 878 aaPredicted RBP19.32■□□□□ 0.68
TREX1-203ENST00000456089 MEX3CQ5U5Q3 659 aaKnown RBP19.32■□□□□ 0.68
TREX1-203ENST00000456089 NUTM2AQ8IVF1 878 aaPredicted RBP19.32■□□□□ 0.68
TREX1-203ENST00000456089 RGL3Q3MIN7 710 aa19.31■□□□□ 0.68
TREX1-203ENST00000456089 SPATA31A6Q5VVP1 1343 aa19.3■□□□□ 0.68
TREX1-203ENST00000456089 RPGRIP1LQ68CZ1 1315 aa19.3■□□□□ 0.68
TREX1-203ENST00000456089 CCDC144AA2RUR9 1427 aa19.29■□□□□ 0.68
TREX1-203ENST00000456089 PTCH1Q13635 1447 aa19.29■□□□□ 0.68
TREX1-203ENST00000456089 MPHOSPH9Q99550 1183 aa19.29■□□□□ 0.68
TREX1-203ENST00000456089 ADGRF5Q8IZF2 1346 aa19.28■□□□□ 0.68
TREX1-203ENST00000456089 C1orf167Q5SNV9 1468 aa19.27■□□□□ 0.67
TREX1-203ENST00000456089 SPATA31E1Q6ZUB1 1445 aa19.26■□□□□ 0.67
TREX1-203ENST00000456089 SETD5Q9C0A6 1442 aa19.25■□□□□ 0.67
TREX1-203ENST00000456089 ORAI2Q96SN7 254 aa19.24■□□□□ 0.67
TREX1-203ENST00000456089 STK26Q9P289 416 aa19.23■□□□□ 0.67
TREX1-203ENST00000456089 LAMC1P11047 1609 aa19.22■□□□□ 0.67
TREX1-203ENST00000456089 PRAG1Q86YV5 1406 aa19.22■□□□□ 0.67
TREX1-203ENST00000456089 PNPLA6Q8IY17 1366 aa19.21■□□□□ 0.67
TREX1-203ENST00000456089 TMEM132EQ6IEE7 984 aa19.21■□□□□ 0.67
TREX1-203ENST00000456089 LRRC59Q96AG4 307 aaKnown RBP19.21■□□□□ 0.67
TREX1-203ENST00000456089 KNDC1Q76NI1 1749 aa19.2■□□□□ 0.66
TREX1-203ENST00000456089 ZNF772Q68DY9 489 aaPredicted RBP19.19■□□□□ 0.66
TREX1-203ENST00000456089 WAPLQ7Z5K2 1190 aa19.19■□□□□ 0.66
TREX1-203ENST00000456089 AFF2P51816 1311 aa19.19■□□□□ 0.66
TREX1-203ENST00000456089 CDC42BPGQ6DT37 1551 aa19.19■□□□□ 0.66
TREX1-203ENST00000456089 ANKRD30BQ9BXX2 1392 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms