RNA–Protein interactions for RNA: ENST00000455214.1

PLXNB3-204, Transcript of plexin B3, humanhuman

TSL 3

Gene PLXNB3, Length 489 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-204ENST00000455214 RPGRIP1LQ68CZ1 1315 aa30.29■■■□□ 2.44
PLXNB3-204ENST00000455214 MYOM2P54296 1465 aa30.29■■■□□ 2.44
PLXNB3-204ENST00000455214 SCAF11Q99590 1463 aaKnown RBP30.28■■■□□ 2.44
PLXNB3-204ENST00000455214 NEUROD1Q13562 356 aa30.28■■■□□ 2.44
PLXNB3-204ENST00000455214 RGL3Q3MIN7 710 aa30.26■■■□□ 2.43
PLXNB3-204ENST00000455214 ZNF326Q5BKZ1 582 aaKnown RBP30.26■■■□□ 2.43
PLXNB3-204ENST00000455214 HSPA2P54652 639 aa30.25■■■□□ 2.43
PLXNB3-204ENST00000455214 NRXN1Q9ULB1 1477 aa30.23■■■□□ 2.43
PLXNB3-204ENST00000455214 NRXN3Q9Y4C0 1643 aa30.22■■■□□ 2.43
PLXNB3-204ENST00000455214 MED14O60244 1454 aa30.22■■■□□ 2.43
PLXNB3-204ENST00000455214 IQGAP1P46940 1657 aa30.21■■■□□ 2.43
PLXNB3-204ENST00000455214 TONSLQ96HA7 1378 aa30.21■■■□□ 2.43
PLXNB3-204ENST00000455214 SETBP1Q9Y6X0 1596 aa30.2■■■□□ 2.43
PLXNB3-204ENST00000455214 LTKP29376 864 aa30.2■■■□□ 2.43
PLXNB3-204ENST00000455214 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.2■■■□□ 2.43
PLXNB3-204ENST00000455214 SETD1AO15047 1707 aaKnown RBP30.18■■■□□ 2.42
PLXNB3-204ENST00000455214 PLEKHG1Q9ULL1 1385 aa30.17■■■□□ 2.42
PLXNB3-204ENST00000455214 ANKLE2Q86XL3 938 aa30.17■■■□□ 2.42
PLXNB3-204ENST00000455214 L3MBTL2Q969R5 705 aa30.17■■■□□ 2.42
PLXNB3-204ENST00000455214 HDGFP51858 240 aaKnown RBP30.16■■■□□ 2.42
PLXNB3-204ENST00000455214 TXNDC2Q86VQ3 553 aa30.16■■■□□ 2.42
PLXNB3-204ENST00000455214 EID1Q9Y6B2 187 aa30.16■■■□□ 2.42
PLXNB3-204ENST00000455214 LAMC1P11047 1609 aa30.14■■■□□ 2.42
PLXNB3-204ENST00000455214 PIK3C2GO75747 1445 aa30.14■■■□□ 2.42
PLXNB3-204ENST00000455214 STAC3Q96MF2 364 aa30.14■■■□□ 2.42
PLXNB3-204ENST00000455214 TIMELESSQ9UNS1 1208 aa30.14■■■□□ 2.42
PLXNB3-204ENST00000455214 DIP2AQ14689 1571 aa30.13■■■□□ 2.41
PLXNB3-204ENST00000455214 NPHP4O75161 1426 aaPredicted RBP30.13■■■□□ 2.41
PLXNB3-204ENST00000455214 VGFO15240 615 aaPredicted RBP30.12■■■□□ 2.41
PLXNB3-204ENST00000455214 NUTM2DQ5VT03 806 aaPredicted RBP30.12■■■□□ 2.41
PLXNB3-204ENST00000455214 DCAF11Q8TEB1 546 aa30.12■■■□□ 2.41
PLXNB3-204ENST00000455214 KIAA1210Q9ULL0 1709 aa30.12■■■□□ 2.41
PLXNB3-204ENST00000455214 ADGRF5Q8IZF2 1346 aa30.12■■■□□ 2.41
PLXNB3-204ENST00000455214 NCKAP5LQ9HCH0 1330 aa30.11■■■□□ 2.41
PLXNB3-204ENST00000455214 PRAG1Q86YV5 1406 aa30.11■■■□□ 2.41
PLXNB3-204ENST00000455214 PPP1R15AO75807 674 aaPredicted RBP30.1■■■□□ 2.41
PLXNB3-204ENST00000455214 ADAMTS13Q76LX8 1427 aa30.08■■■□□ 2.41
PLXNB3-204ENST00000455214 TRPM1Q7Z4N2 1603 aa30.07■■■□□ 2.4
PLXNB3-204ENST00000455214 ALKQ9UM73 1620 aa30.07■■■□□ 2.4
PLXNB3-204ENST00000455214 KDM2AQ9Y2K7 1162 aa30.05■■■□□ 2.4
PLXNB3-204ENST00000455214 ASXL1Q8IXJ9 1541 aa30.01■■■□□ 2.4
PLXNB3-204ENST00000455214 CHD2O14647 1828 aaKnown RBP29.98■■■□□ 2.39
PLXNB3-204ENST00000455214 ADGRB1O14514 1584 aa29.96■■■□□ 2.39
PLXNB3-204ENST00000455214 RALGAPBQ86X10 1494 aa29.95■■■□□ 2.39
PLXNB3-204ENST00000455214 NWD1Q149M9 1564 aa29.94■■■□□ 2.38
PLXNB3-204ENST00000455214 NBPF8Q3BBV2 869 aa29.94■■■□□ 2.38
PLXNB3-204ENST00000455214 C14orf93Q9H972 538 aaKnown RBP29.94■■■□□ 2.38
PLXNB3-204ENST00000455214 KNDC1Q76NI1 1749 aa29.93■■■□□ 2.38
PLXNB3-204ENST00000455214 TBX22Q9Y458 520 aa29.93■■■□□ 2.38
PLXNB3-204ENST00000455214 XRN1Q8IZH2 1706 aaKnown RBP29.93■■■□□ 2.38
PLXNB3-204ENST00000455214 SENP3Q9H4L4 574 aaPredicted RBP29.91■■■□□ 2.38
PLXNB3-204ENST00000455214 DMRT2Q9Y5R5 561 aa29.91■■■□□ 2.38
PLXNB3-204ENST00000455214 PIK3R4Q99570 1358 aa29.9■■■□□ 2.38
PLXNB3-204ENST00000455214 STRCP1A6NGW2 1772 aa29.9■■■□□ 2.38
PLXNB3-204ENST00000455214 CFAP70Q5T0N1 1121 aa29.9■■■□□ 2.38
PLXNB3-204ENST00000455214 BCANQ96GW7 911 aa29.9■■■□□ 2.38
PLXNB3-204ENST00000455214 SLC26A8Q96RN1 970 aa29.9■■■□□ 2.38
PLXNB3-204ENST00000455214 METP08581 1390 aa29.89■■■□□ 2.37
PLXNB3-204ENST00000455214 GPRASP1Q5JY77 1395 aa29.86■■■□□ 2.37
PLXNB3-204ENST00000455214 PTPRUQ92729 1446 aa29.86■■■□□ 2.37
PLXNB3-204ENST00000455214 CPS1P31327 1500 aa29.83■■■□□ 2.37
PLXNB3-204ENST00000455214 ARHGEF28Q8N1W1 1705 aaKnown RBP29.82■■■□□ 2.36
PLXNB3-204ENST00000455214 YTHDC2Q9H6S0 1430 aaKnown RBP29.81■■■□□ 2.36
PLXNB3-204ENST00000455214 TECPR2O15040 1411 aa29.8■■■□□ 2.36
PLXNB3-204ENST00000455214 NKTRP30414 1462 aaKnown RBP29.8■■■□□ 2.36
PLXNB3-204ENST00000455214 ROCK2O75116 1388 aaKnown RBP29.79■■■□□ 2.36
PLXNB3-204ENST00000455214 LRPPRCP42704 1394 aaKnown RBP29.79■■■□□ 2.36
PLXNB3-204ENST00000455214 NBPF1Q3BBV0 1214 aa29.79■■■□□ 2.36
PLXNB3-204ENST00000455214 DLC1Q96QB1 1528 aa29.79■■■□□ 2.36
PLXNB3-204ENST00000455214 ZEB1P37275 1124 aaPredicted RBP29.77■■■□□ 2.36
PLXNB3-204ENST00000455214 TMEM132EQ6IEE7 984 aa29.77■■■□□ 2.36
PLXNB3-204ENST00000455214 PTCH1Q13635 1447 aa29.77■■■□□ 2.36
PLXNB3-204ENST00000455214 ABCC11Q96J66 1382 aa29.74■■■□□ 2.35
PLXNB3-204ENST00000455214 LTBP4Q8N2S1 1624 aa29.74■■■□□ 2.35
PLXNB3-204ENST00000455214 KCNA6P17658 529 aa29.73■■■□□ 2.35
PLXNB3-204ENST00000455214 ZNF335Q9H4Z2 1342 aaPredicted RBP29.72■■■□□ 2.35
PLXNB3-204ENST00000455214 XIRP1Q702N8 1843 aaKnown RBP29.71■■■□□ 2.35
PLXNB3-204ENST00000455214 AMOTL2Q9Y2J4 779 aa29.7■■■□□ 2.35
PLXNB3-204ENST00000455214 FAM135BQ49AJ0 1406 aa29.67■■■□□ 2.34
PLXNB3-204ENST00000455214 ROBO2Q9HCK4 1378 aa29.66■■■□□ 2.34
PLXNB3-204ENST00000455214 CARD11Q9BXL7 1154 aa29.66■■■□□ 2.34
PLXNB3-204ENST00000455214 QRICH2Q9H0J4 1663 aa29.65■■■□□ 2.34
PLXNB3-204ENST00000455214 NALCNQ8IZF0 1738 aa29.63■■■□□ 2.33
PLXNB3-204ENST00000455214 LRRC7Q96NW7 1537 aa29.63■■■□□ 2.33
PLXNB3-204ENST00000455214 STK26Q9P289 416 aa29.63■■■□□ 2.33
PLXNB3-204ENST00000455214 SIRT1Q96EB6 747 aa29.62■■■□□ 2.33
PLXNB3-204ENST00000455214 TRAK1Q9UPV9 953 aa29.61■■■□□ 2.33
PLXNB3-204ENST00000455214 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.61■■■□□ 2.33
PLXNB3-204ENST00000455214 EIF3AQ14152 1382 aaKnown RBP29.6■■■□□ 2.33
PLXNB3-204ENST00000455214 USP47Q96K76 1375 aa29.59■■■□□ 2.33
PLXNB3-204ENST00000455214 ADGRB2O60241 1585 aa29.58■■■□□ 2.33
PLXNB3-204ENST00000455214 PLEKHH1Q9ULM0 1364 aa29.58■■■□□ 2.33
PLXNB3-204ENST00000455214 NCOA3Q9Y6Q9 1424 aa29.57■■■□□ 2.32
PLXNB3-204ENST00000455214 TMEM94Q12767 1356 aa29.53■■■□□ 2.32
PLXNB3-204ENST00000455214 PRAM1Q96QH2 718 aa29.53■■■□□ 2.32
PLXNB3-204ENST00000455214 ADGRL3Q9HAR2 1447 aa29.53■■■□□ 2.32
PLXNB3-204ENST00000455214 PROSER2Q86WR7 435 aaPredicted RBP29.52■■■□□ 2.32
PLXNB3-204ENST00000455214 CENPJQ9HC77 1338 aaPredicted RBP29.51■■■□□ 2.32
PLXNB3-204ENST00000455214 WAPLQ7Z5K2 1190 aa29.51■■■□□ 2.31
PLXNB3-204ENST00000455214 CDC42BPGQ6DT37 1551 aa29.51■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms