RNA–Protein interactions for RNA: ENST00000454947.1

SH3BP4-207, Transcript of SH3 domain binding protein 4, humanhuman

TSL 4

Gene SH3BP4, Length 500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP4-207ENST00000454947 THEMISQ8N1K5 641 aaPredicted RBP13.59□□□□□ -0.23
SH3BP4-207ENST00000454947 L3MBTL2Q969R5 705 aa13.59□□□□□ -0.23
SH3BP4-207ENST00000454947 PRAG1Q86YV5 1406 aa13.58□□□□□ -0.24
SH3BP4-207ENST00000454947 CHGAP10645 457 aaKnown RBP13.58□□□□□ -0.24
SH3BP4-207ENST00000454947 NEUROD1Q13562 356 aa13.58□□□□□ -0.24
SH3BP4-207ENST00000454947 STAC3Q96MF2 364 aa13.58□□□□□ -0.24
SH3BP4-207ENST00000454947 PIK3C2GO75747 1445 aa13.57□□□□□ -0.24
SH3BP4-207ENST00000454947 RIMS2Q9UQ26 1411 aa13.56□□□□□ -0.24
SH3BP4-207ENST00000454947 SETBP1Q9Y6X0 1596 aa13.56□□□□□ -0.24
SH3BP4-207ENST00000454947 NRXN3Q9Y4C0 1643 aa13.56□□□□□ -0.24
SH3BP4-207ENST00000454947 HSPA2P54652 639 aa13.55□□□□□ -0.24
SH3BP4-207ENST00000454947 KIAA1210Q9ULL0 1709 aa13.54□□□□□ -0.24
SH3BP4-207ENST00000454947 HDGFP51858 240 aaKnown RBP13.54□□□□□ -0.24
SH3BP4-207ENST00000454947 EID1Q9Y6B2 187 aa13.54□□□□□ -0.24
SH3BP4-207ENST00000454947 MED14O60244 1454 aa13.54□□□□□ -0.24
SH3BP4-207ENST00000454947 RALGAPBQ86X10 1494 aa13.54□□□□□ -0.24
SH3BP4-207ENST00000454947 SCAF11Q99590 1463 aaKnown RBP13.54□□□□□ -0.24
SH3BP4-207ENST00000454947 SETD1AO15047 1707 aaKnown RBP13.53□□□□□ -0.24
SH3BP4-207ENST00000454947 POLR1AO95602 1720 aaPredicted RBP13.53□□□□□ -0.24
SH3BP4-207ENST00000454947 PPP1R15AO75807 674 aaPredicted RBP13.53□□□□□ -0.24
SH3BP4-207ENST00000454947 ZEB1P37275 1124 aaPredicted RBP13.53□□□□□ -0.24
SH3BP4-207ENST00000454947 LAMC1P11047 1609 aa13.53□□□□□ -0.24
SH3BP4-207ENST00000454947 TRPM1Q7Z4N2 1603 aa13.53□□□□□ -0.24
SH3BP4-207ENST00000454947 RGL3Q3MIN7 710 aa13.52□□□□□ -0.25
SH3BP4-207ENST00000454947 ZNF326Q5BKZ1 582 aaKnown RBP13.52□□□□□ -0.25
SH3BP4-207ENST00000454947 ANKLE2Q86XL3 938 aa13.52□□□□□ -0.25
SH3BP4-207ENST00000454947 ADGRB1O14514 1584 aa13.51□□□□□ -0.25
SH3BP4-207ENST00000454947 ASXL1Q8IXJ9 1541 aa13.51□□□□□ -0.25
SH3BP4-207ENST00000454947 GPRASP1Q5JY77 1395 aa13.51□□□□□ -0.25
SH3BP4-207ENST00000454947 PLEKHG1Q9ULL1 1385 aa13.51□□□□□ -0.25
SH3BP4-207ENST00000454947 ADGRF5Q8IZF2 1346 aa13.51□□□□□ -0.25
SH3BP4-207ENST00000454947 DMRT2Q9Y5R5 561 aa13.51□□□□□ -0.25
SH3BP4-207ENST00000454947 ADAMTS13Q76LX8 1427 aa13.5□□□□□ -0.25
SH3BP4-207ENST00000454947 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.5□□□□□ -0.25
SH3BP4-207ENST00000454947 DCAF11Q8TEB1 546 aa13.5□□□□□ -0.25
SH3BP4-207ENST00000454947 IQGAP1P46940 1657 aa13.5□□□□□ -0.25
SH3BP4-207ENST00000454947 DIP2AQ14689 1571 aa13.49□□□□□ -0.25
SH3BP4-207ENST00000454947 LTKP29376 864 aa13.49□□□□□ -0.25
SH3BP4-207ENST00000454947 NBPF8Q3BBV2 869 aa13.49□□□□□ -0.25
SH3BP4-207ENST00000454947 VGFO15240 615 aaPredicted RBP13.48□□□□□ -0.25
SH3BP4-207ENST00000454947 STRCQ7RTU9 1775 aa13.48□□□□□ -0.25
SH3BP4-207ENST00000454947 ALKQ9UM73 1620 aa13.47□□□□□ -0.25
SH3BP4-207ENST00000454947 TXNDC2Q86VQ3 553 aa13.47□□□□□ -0.25
SH3BP4-207ENST00000454947 BCANQ96GW7 911 aa13.47□□□□□ -0.25
SH3BP4-207ENST00000454947 NCKAP5LQ9HCH0 1330 aa13.46□□□□□ -0.25
SH3BP4-207ENST00000454947 C14orf93Q9H972 538 aaKnown RBP13.45□□□□□ -0.26
SH3BP4-207ENST00000454947 NPHP4O75161 1426 aaPredicted RBP13.44□□□□□ -0.26
SH3BP4-207ENST00000454947 TECPR2O15040 1411 aa13.42□□□□□ -0.26
SH3BP4-207ENST00000454947 NUTM2DQ5VT03 806 aaPredicted RBP13.42□□□□□ -0.26
SH3BP4-207ENST00000454947 KDM2AQ9Y2K7 1162 aa13.42□□□□□ -0.26
SH3BP4-207ENST00000454947 KNDC1Q76NI1 1749 aa13.42□□□□□ -0.26
SH3BP4-207ENST00000454947 XRN1Q8IZH2 1706 aaKnown RBP13.42□□□□□ -0.26
SH3BP4-207ENST00000454947 NWD1Q149M9 1564 aa13.41□□□□□ -0.26
SH3BP4-207ENST00000454947 PIK3R4Q99570 1358 aa13.41□□□□□ -0.26
SH3BP4-207ENST00000454947 DLC1Q96QB1 1528 aa13.4□□□□□ -0.26
SH3BP4-207ENST00000454947 CFAP70Q5T0N1 1121 aa13.4□□□□□ -0.26
SH3BP4-207ENST00000454947 CPS1P31327 1500 aa13.39□□□□□ -0.27
SH3BP4-207ENST00000454947 TBX22Q9Y458 520 aa13.39□□□□□ -0.27
SH3BP4-207ENST00000454947 ROCK2O75116 1388 aaKnown RBP13.39□□□□□ -0.27
SH3BP4-207ENST00000454947 METP08581 1390 aa13.39□□□□□ -0.27
SH3BP4-207ENST00000454947 LRPPRCP42704 1394 aaKnown RBP13.38□□□□□ -0.27
SH3BP4-207ENST00000454947 NBPF1Q3BBV0 1214 aa13.38□□□□□ -0.27
SH3BP4-207ENST00000454947 PTPRUQ92729 1446 aa13.38□□□□□ -0.27
SH3BP4-207ENST00000454947 YTHDC2Q9H6S0 1430 aaKnown RBP13.38□□□□□ -0.27
SH3BP4-207ENST00000454947 ARHGEF28Q8N1W1 1705 aaKnown RBP13.37□□□□□ -0.27
SH3BP4-207ENST00000454947 PTCH1Q13635 1447 aa13.37□□□□□ -0.27
SH3BP4-207ENST00000454947 ABCC11Q96J66 1382 aa13.36□□□□□ -0.27
SH3BP4-207ENST00000454947 CHD2O14647 1828 aaKnown RBP13.35□□□□□ -0.27
SH3BP4-207ENST00000454947 SENP3Q9H4L4 574 aaPredicted RBP13.35□□□□□ -0.27
SH3BP4-207ENST00000454947 FAM135BQ49AJ0 1406 aa13.34□□□□□ -0.27
SH3BP4-207ENST00000454947 SLC26A8Q96RN1 970 aa13.34□□□□□ -0.27
SH3BP4-207ENST00000454947 USP47Q96K76 1375 aa13.33□□□□□ -0.27
SH3BP4-207ENST00000454947 SBNO2Q9Y2G9 1366 aa13.33□□□□□ -0.27
SH3BP4-207ENST00000454947 NKTRP30414 1462 aaKnown RBP13.33□□□□□ -0.28
SH3BP4-207ENST00000454947 SIRT1Q96EB6 747 aa13.32□□□□□ -0.28
SH3BP4-207ENST00000454947 CARD11Q9BXL7 1154 aa13.32□□□□□ -0.28
SH3BP4-207ENST00000454947 STRCP1A6NGW2 1772 aa13.31□□□□□ -0.28
SH3BP4-207ENST00000454947 TMEM132EQ6IEE7 984 aa13.31□□□□□ -0.28
SH3BP4-207ENST00000454947 ADGRB2O60241 1585 aa13.3□□□□□ -0.28
SH3BP4-207ENST00000454947 EIF3AQ14152 1382 aaKnown RBP13.3□□□□□ -0.28
SH3BP4-207ENST00000454947 ROBO2Q9HCK4 1378 aa13.3□□□□□ -0.28
SH3BP4-207ENST00000454947 ZNF335Q9H4Z2 1342 aaPredicted RBP13.29□□□□□ -0.28
SH3BP4-207ENST00000454947 QRICH2Q9H0J4 1663 aa13.28□□□□□ -0.28
SH3BP4-207ENST00000454947 KCNA6P17658 529 aa13.27□□□□□ -0.29
SH3BP4-207ENST00000454947 TESK2Q96S53 571 aa13.27□□□□□ -0.29
SH3BP4-207ENST00000454947 EIF4G2P78344 907 aaKnown RBP eCLIP13.26□□□□□ -0.29
SH3BP4-207ENST00000454947 PLEKHH1Q9ULM0 1364 aa13.26□□□□□ -0.29
SH3BP4-207ENST00000454947 LTBP4Q8N2S1 1624 aa13.25□□□□□ -0.29
SH3BP4-207ENST00000454947 TULP4Q9NRJ4 1543 aa13.25□□□□□ -0.29
SH3BP4-207ENST00000454947 HSPA5P11021 654 aaKnown RBP13.25□□□□□ -0.29
SH3BP4-207ENST00000454947 AMOTL2Q9Y2J4 779 aa13.25□□□□□ -0.29
SH3BP4-207ENST00000454947 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.25□□□□□ -0.29
SH3BP4-207ENST00000454947 NCOA3Q9Y6Q9 1424 aa13.24□□□□□ -0.29
SH3BP4-207ENST00000454947 CENPJQ9HC77 1338 aaPredicted RBP13.24□□□□□ -0.29
SH3BP4-207ENST00000454947 TRAK1Q9UPV9 953 aa13.24□□□□□ -0.29
SH3BP4-207ENST00000454947 CDC42BPGQ6DT37 1551 aa13.24□□□□□ -0.29
SH3BP4-207ENST00000454947 NALCNQ8IZF0 1738 aa13.23□□□□□ -0.29
SH3BP4-207ENST00000454947 ST20-MTHFSA0A0A6YYL1 179 aa13.23□□□□□ -0.29
SH3BP4-207ENST00000454947 LRRC7Q96NW7 1537 aa13.23□□□□□ -0.29
SH3BP4-207ENST00000454947 ADGRL3Q9HAR2 1447 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms