RNA–Protein interactions for RNA: ENST00000454043.1

LINC00299-204, long intergenic non-protein coding RNA 299, humanhuman

TSL 4

Gene LINC00299, Length 591 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-204ENST00000454043 GRXCR2A6NFK2 248 aa11.86□□□□□ -0.51
LINC00299-204ENST00000454043 NBR1Q14596 966 aa11.86□□□□□ -0.51
LINC00299-204ENST00000454043 RBM33Q96EV2 1170 aaKnown RBP11.86□□□□□ -0.51
LINC00299-204ENST00000454043 SYNJ2O15056 1496 aa11.85□□□□□ -0.51
LINC00299-204ENST00000454043 EN1Q05925 392 aaPredicted RBP11.85□□□□□ -0.51
LINC00299-204ENST00000454043 VPS8Q8N3P4 1428 aa11.84□□□□□ -0.51
LINC00299-204ENST00000454043 OSBPP22059 807 aa11.83□□□□□ -0.52
LINC00299-204ENST00000454043 PRIM1P49642 420 aaKnown RBP11.83□□□□□ -0.52
LINC00299-204ENST00000454043 STAC3Q96MF2 364 aa11.83□□□□□ -0.52
LINC00299-204ENST00000454043 KDM2AQ9Y2K7 1162 aa11.82□□□□□ -0.52
LINC00299-204ENST00000454043 GRIN2AQ12879 1464 aa11.82□□□□□ -0.52
LINC00299-204ENST00000454043 EFCAB5A4FU69 1503 aa11.81□□□□□ -0.52
LINC00299-204ENST00000454043 P3H3Q8IVL6 736 aa11.81□□□□□ -0.52
LINC00299-204ENST00000454043 MAP3K7O43318 606 aa11.8□□□□□ -0.52
LINC00299-204ENST00000454043 ONECUT3O60422 494 aaPredicted RBP11.8□□□□□ -0.52
LINC00299-204ENST00000454043 TSR1Q2NL82 804 aaKnown RBP11.8□□□□□ -0.52
LINC00299-204ENST00000454043 PROX2Q3B8N5 592 aa11.8□□□□□ -0.52
LINC00299-204ENST00000454043 ARHGAP35Q9NRY4 1499 aa11.8□□□□□ -0.52
LINC00299-204ENST00000454043 CTTNBP2Q8WZ74 1663 aa11.8□□□□□ -0.52
LINC00299-204ENST00000454043 KIAA0586Q9BVV6 1533 aa11.8□□□□□ -0.52
LINC00299-204ENST00000454043 TRIM26Q12899 539 aaPredicted RBP11.79□□□□□ -0.52
LINC00299-204ENST00000454043 RABGEF1Q9UJ41 708 aa11.79□□□□□ -0.52
LINC00299-204ENST00000454043 ARAP1Q96P48 1450 aa11.77□□□□□ -0.52
LINC00299-204ENST00000454043 IQGAP2Q13576 1575 aa11.76□□□□□ -0.53
LINC00299-204ENST00000454043 MLLT3P42568 568 aaPredicted RBP11.76□□□□□ -0.53
LINC00299-204ENST00000454043 FMN1Q68DA7 1419 aa11.76□□□□□ -0.53
LINC00299-204ENST00000454043 VSIG10Q8N0Z9 540 aa11.75□□□□□ -0.53
LINC00299-204ENST00000454043 MRPL50Q8N5N7 158 aaKnown RBP11.75□□□□□ -0.53
LINC00299-204ENST00000454043 KIAA1468Q9P260 1216 aa11.75□□□□□ -0.53
LINC00299-204ENST00000454043 TRIM6-TRIM34B2RNG4 842 aa11.74□□□□□ -0.53
LINC00299-204ENST00000454043 NUP160Q12769 1436 aa11.73□□□□□ -0.53
LINC00299-204ENST00000454043 CERKQ8TCT0 537 aa11.73□□□□□ -0.53
LINC00299-204ENST00000454043 KCTD12Q96CX2 325 aaKnown RBP11.73□□□□□ -0.53
LINC00299-204ENST00000454043 NBPF3Q9H094 633 aa11.73□□□□□ -0.53
LINC00299-204ENST00000454043 UGGT2Q9NYU1 1516 aa11.72□□□□□ -0.53
LINC00299-204ENST00000454043 HCSTQ9UBK5 93 aa11.72□□□□□ -0.53
LINC00299-204ENST00000454043 CARMIL2Q6F5E8 1435 aa11.71□□□□□ -0.53
LINC00299-204ENST00000454043 SEMA3EO15041 775 aa11.7□□□□□ -0.54
LINC00299-204ENST00000454043 PCGF6Q9BYE7 350 aa11.7□□□□□ -0.54
LINC00299-204ENST00000454043 TSKSQ9UJT2 592 aa11.7□□□□□ -0.54
LINC00299-204ENST00000454043 SAMD9Q5K651 1589 aa11.7□□□□□ -0.54
LINC00299-204ENST00000454043 FHOD3Q2V2M9 1422 aa11.69□□□□□ -0.54
LINC00299-204ENST00000454043 GOLGA8CPA6NN73 597 aa11.69□□□□□ -0.54
LINC00299-204ENST00000454043 PRSS12P56730 875 aa11.69□□□□□ -0.54
LINC00299-204ENST00000454043 LAPTM4BQ86VI4 370 aa11.69□□□□□ -0.54
LINC00299-204ENST00000454043 CDCA7LQ96GN5 454 aa11.69□□□□□ -0.54
LINC00299-204ENST00000454043 CDHR5Q9HBB8 845 aa11.69□□□□□ -0.54
LINC00299-204ENST00000454043 NPDC1Q9NQX5 325 aaPredicted RBP11.69□□□□□ -0.54
LINC00299-204ENST00000454043 ATP1B4Q9UN42 357 aaPredicted RBP11.69□□□□□ -0.54
LINC00299-204ENST00000454043 CASKIN1Q8WXD9 1431 aa11.69□□□□□ -0.54
LINC00299-204ENST00000454043 MAP3K1Q13233 1512 aa11.68□□□□□ -0.54
LINC00299-204ENST00000454043 CEP170Q5SW79 1584 aa11.67□□□□□ -0.54
LINC00299-204ENST00000454043 PACS2Q86VP3 889 aa11.67□□□□□ -0.54
LINC00299-204ENST00000454043 PPARGC1BQ86YN6 1023 aaKnown RBP11.67□□□□□ -0.54
LINC00299-204ENST00000454043 FAM198AQ9UFP1 575 aa11.67□□□□□ -0.54
LINC00299-204ENST00000454043 FYCO1Q9BQS8 1478 aa11.67□□□□□ -0.54
LINC00299-204ENST00000454043 WNT2BQ93097 391 aa11.66□□□□□ -0.54
LINC00299-204ENST00000454043 THSD4Q6ZMP0 1018 aa11.65□□□□□ -0.54
LINC00299-204ENST00000454043 TESPA1A2RU30 521 aaPredicted RBP11.63□□□□□ -0.55
LINC00299-204ENST00000454043 ZFRQ96KR1 1074 aaKnown RBP11.63□□□□□ -0.55
LINC00299-204ENST00000454043 SEPT9Q9UHD8 586 aaPredicted RBP11.63□□□□□ -0.55
LINC00299-204ENST00000454043 DISP1Q96F81 1524 aa11.62□□□□□ -0.55
LINC00299-204ENST00000454043 PTPN5P54829 565 aa11.62□□□□□ -0.55
LINC00299-204ENST00000454043 RBM27Q9P2N5 1060 aaKnown RBP11.62□□□□□ -0.55
LINC00299-204ENST00000454043 FAM98CQ17RN3 349 aaKnown RBP11.61□□□□□ -0.55
LINC00299-204ENST00000454043 TTC13Q8NBP0 860 aa11.61□□□□□ -0.55
LINC00299-204ENST00000454043 KIAA0556O60303 1618 aa11.6□□□□□ -0.55
LINC00299-204ENST00000454043 CHD1O14646 1710 aa11.6□□□□□ -0.55
LINC00299-204ENST00000454043 C3orf80F5H4A9 247 aa11.6□□□□□ -0.55
LINC00299-204ENST00000454043 CDK11AQ9UQ88 783 aaPredicted RBP11.6□□□□□ -0.55
LINC00299-204ENST00000454043 PRG4Q92954 1404 aaPredicted RBP11.6□□□□□ -0.55
LINC00299-204ENST00000454043 TTBK1Q5TCY1 1321 aaPredicted RBP11.6□□□□□ -0.55
LINC00299-204ENST00000454043 CCDC18Q5T9S5 1454 aa11.59□□□□□ -0.55
LINC00299-204ENST00000454043 ANKK1Q8NFD2 765 aa11.59□□□□□ -0.55
LINC00299-204ENST00000454043 TATDN2Q93075 761 aa11.59□□□□□ -0.55
LINC00299-204ENST00000454043 PCF11O94913 1555 aaKnown RBP11.58□□□□□ -0.55
LINC00299-204ENST00000454043 TIAM1Q13009 1591 aa11.58□□□□□ -0.55
LINC00299-204ENST00000454043 PTGDRQ13258 359 aa11.58□□□□□ -0.56
LINC00299-204ENST00000454043 KANK4Q5T7N3 995 aaPredicted RBP11.58□□□□□ -0.56
LINC00299-204ENST00000454043 SOWAHBA6NEL2 793 aa11.57□□□□□ -0.56
LINC00299-204ENST00000454043 SMAPO00193 183 aa11.57□□□□□ -0.56
LINC00299-204ENST00000454043 PNMA3Q9UL41 463 aa11.57□□□□□ -0.56
LINC00299-204ENST00000454043 LRRC9Q6ZRR7 1453 aa11.57□□□□□ -0.56
LINC00299-204ENST00000454043 NUTM2FA1L443 756 aa11.56□□□□□ -0.56
LINC00299-204ENST00000454043 PTPRGP23470 1445 aa11.56□□□□□ -0.56
LINC00299-204ENST00000454043 SMYD5Q6GMV2 418 aa11.56□□□□□ -0.56
LINC00299-204ENST00000454043 PADI6Q6TGC4 694 aa11.56□□□□□ -0.56
LINC00299-204ENST00000454043 HECW1Q76N89 1606 aa11.56□□□□□ -0.56
LINC00299-204ENST00000454043 MTUS2Q5JR59 1369 aa11.55□□□□□ -0.56
LINC00299-204ENST00000454043 NUDT18Q6ZVK8 323 aa11.55□□□□□ -0.56
LINC00299-204ENST00000454043 BCAMP50895 628 aa11.54□□□□□ -0.56
LINC00299-204ENST00000454043 NBPF26B4DH59 902 aa11.53□□□□□ -0.56
LINC00299-204ENST00000454043 CLASP1Q7Z460 1538 aa11.53□□□□□ -0.56
LINC00299-204ENST00000454043 SHROOM2Q13796 1616 aa11.53□□□□□ -0.56
LINC00299-204ENST00000454043 RBM26Q5T8P6 1007 aaKnown RBP11.52□□□□□ -0.57
LINC00299-204ENST00000454043 CFAP43Q8NDM7 1665 aa11.52□□□□□ -0.57
LINC00299-204ENST00000454043 EPRSP07814 1512 aaKnown RBP11.51□□□□□ -0.57
LINC00299-204ENST00000454043 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.51□□□□□ -0.57
LINC00299-204ENST00000454043 PLA2G2EQ9NZK7 142 aa11.51□□□□□ -0.57
LINC00299-204ENST00000454043 RAPGEF6Q8TEU7 1601 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms