RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 TMEM94Q12767 1356 aa18.08■□□□□ 0.49
GARNL3-210ENST00000453030 CHD2O14647 1828 aaKnown RBP18.07■□□□□ 0.48
GARNL3-210ENST00000453030 NKTRP30414 1462 aaKnown RBP18.07■□□□□ 0.48
GARNL3-210ENST00000453030 IQGAP3Q86VI3 1631 aa18.06■□□□□ 0.48
GARNL3-210ENST00000453030 RBM33Q96EV2 1170 aaKnown RBP18.05■□□□□ 0.48
GARNL3-210ENST00000453030 BCANQ96GW7 911 aa18.05■□□□□ 0.48
GARNL3-210ENST00000453030 SLC52A1Q9NWF4 448 aa18.05■□□□□ 0.48
GARNL3-210ENST00000453030 ZFYVE9O95405 1425 aa18.05■□□□□ 0.48
GARNL3-210ENST00000453030 KCNA6P17658 529 aa18.04■□□□□ 0.48
GARNL3-210ENST00000453030 RIMS2Q9UQ26 1411 aa18.03■□□□□ 0.48
GARNL3-210ENST00000453030 PROSER2Q86WR7 435 aaPredicted RBP18.02■□□□□ 0.48
GARNL3-210ENST00000453030 FAM135BQ49AJ0 1406 aa18.01■□□□□ 0.47
GARNL3-210ENST00000453030 PPP1R15AO75807 674 aaPredicted RBP18.01■□□□□ 0.47
GARNL3-210ENST00000453030 PLEKHG1Q9ULL1 1385 aa18.01■□□□□ 0.47
GARNL3-210ENST00000453030 PHLPP1O60346 1717 aa18■□□□□ 0.47
GARNL3-210ENST00000453030 ROCK1Q13464 1354 aa17.99■□□□□ 0.47
GARNL3-210ENST00000453030 CHGAP10645 457 aaKnown RBP17.98■□□□□ 0.47
GARNL3-210ENST00000453030 MSH6P52701 1360 aa17.98■□□□□ 0.47
GARNL3-210ENST00000453030 SPHKAPQ2M3C7 1700 aa17.98■□□□□ 0.47
GARNL3-210ENST00000453030 DIP2AQ14689 1571 aa17.96■□□□□ 0.47
GARNL3-210ENST00000453030 ITGAEP38570 1179 aa17.96■□□□□ 0.47
GARNL3-210ENST00000453030 NUTM2DQ5VT03 806 aaPredicted RBP17.94■□□□□ 0.46
GARNL3-210ENST00000453030 PPARGC1BQ86YN6 1023 aaKnown RBP17.93■□□□□ 0.46
GARNL3-210ENST00000453030 NUP155O75694 1391 aa17.92■□□□□ 0.46
GARNL3-210ENST00000453030 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.92■□□□□ 0.46
GARNL3-210ENST00000453030 ADAMTS13Q76LX8 1427 aa17.92■□□□□ 0.46
GARNL3-210ENST00000453030 HDGFP51858 240 aaKnown RBP17.92■□□□□ 0.46
GARNL3-210ENST00000453030 RGS17Q9UGC6 210 aaPredicted RBP17.91■□□□□ 0.46
GARNL3-210ENST00000453030 TRPM2O94759 1503 aa17.91■□□□□ 0.46
GARNL3-210ENST00000453030 COL16A1Q07092 1604 aaPredicted RBP17.9■□□□□ 0.46
GARNL3-210ENST00000453030 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.9■□□□□ 0.46
GARNL3-210ENST00000453030 NRXN3Q9Y4C0 1643 aa17.9■□□□□ 0.46
GARNL3-210ENST00000453030 C14orf37Q86TY3 774 aa17.88■□□□□ 0.45
GARNL3-210ENST00000453030 TBX22Q9Y458 520 aa17.88■□□□□ 0.45
GARNL3-210ENST00000453030 SLAIN2Q9P270 581 aa17.87■□□□□ 0.45
GARNL3-210ENST00000453030 SETD1AO15047 1707 aaKnown RBP17.86■□□□□ 0.45
GARNL3-210ENST00000453030 XRN1Q8IZH2 1706 aaKnown RBP17.86■□□□□ 0.45
GARNL3-210ENST00000453030 CLTCL1P53675 1640 aa17.86■□□□□ 0.45
GARNL3-210ENST00000453030 KIF1BO60333 1816 aa17.85■□□□□ 0.45
GARNL3-210ENST00000453030 PIK3R4Q99570 1358 aa17.85■□□□□ 0.45
GARNL3-210ENST00000453030 SETBP1Q9Y6X0 1596 aa17.84■□□□□ 0.45
GARNL3-210ENST00000453030 NCOA3Q9Y6Q9 1424 aa17.84■□□□□ 0.45
GARNL3-210ENST00000453030 AHDC1Q5TGY3 1603 aaPredicted RBP17.83■□□□□ 0.45
GARNL3-210ENST00000453030 PTPRUQ92729 1446 aa17.83■□□□□ 0.45
GARNL3-210ENST00000453030 JCADQ9P266 1359 aa17.83■□□□□ 0.45
GARNL3-210ENST00000453030 SHPRHQ149N8 1683 aa17.83■□□□□ 0.44
GARNL3-210ENST00000453030 POTEAQ6S8J7 498 aa17.82■□□□□ 0.44
GARNL3-210ENST00000453030 NEXMIFQ5QGS0 1516 aa17.8■□□□□ 0.44
GARNL3-210ENST00000453030 LRP6O75581 1613 aa17.8■□□□□ 0.44
GARNL3-210ENST00000453030 ATF3P18847 181 aa17.79■□□□□ 0.44
GARNL3-210ENST00000453030 ZNF326Q5BKZ1 582 aaKnown RBP17.79■□□□□ 0.44
GARNL3-210ENST00000453030 CADPS2Q86UW7 1296 aa17.79■□□□□ 0.44
GARNL3-210ENST00000453030 AMOTL2Q9Y2J4 779 aa17.79■□□□□ 0.44
GARNL3-210ENST00000453030 NALCNQ8IZF0 1738 aa17.78■□□□□ 0.44
GARNL3-210ENST00000453030 C19orf44Q9H6X5 657 aa17.78■□□□□ 0.44
GARNL3-210ENST00000453030 RRBP1Q9P2E9 1410 aaKnown RBP17.78■□□□□ 0.44
GARNL3-210ENST00000453030 NHSL1Q5SYE7 1610 aa17.76■□□□□ 0.43
GARNL3-210ENST00000453030 NAIPQ13075 1403 aa17.76■□□□□ 0.43
GARNL3-210ENST00000453030 ASXL1Q8IXJ9 1541 aa17.76■□□□□ 0.43
GARNL3-210ENST00000453030 DCCP43146 1447 aa17.75■□□□□ 0.43
GARNL3-210ENST00000453030 METP08581 1390 aa17.75■□□□□ 0.43
GARNL3-210ENST00000453030 MEX3CQ5U5Q3 659 aaKnown RBP17.72■□□□□ 0.43
GARNL3-210ENST00000453030 BRINP3Q76B58 766 aa17.72■□□□□ 0.43
GARNL3-210ENST00000453030 MST1RQ04912 1400 aa17.72■□□□□ 0.43
GARNL3-210ENST00000453030 SPATA31A6Q5VVP1 1343 aa17.72■□□□□ 0.43
GARNL3-210ENST00000453030 ADGRL3Q9HAR2 1447 aa17.71■□□□□ 0.43
GARNL3-210ENST00000453030 PPLO60437 1756 aa17.71■□□□□ 0.43
GARNL3-210ENST00000453030 HFM1A2PYH4 1435 aa17.67■□□□□ 0.42
GARNL3-210ENST00000453030 TRIM52Q96A61 297 aa17.67■□□□□ 0.42
GARNL3-210ENST00000453030 NUTM2BA6NNL0 878 aaPredicted RBP17.65■□□□□ 0.42
GARNL3-210ENST00000453030 NUTM2EB1AL46 878 aaPredicted RBP17.65■□□□□ 0.42
GARNL3-210ENST00000453030 NUTM2AQ8IVF1 878 aaPredicted RBP17.65■□□□□ 0.42
GARNL3-210ENST00000453030 PTCH1Q13635 1447 aa17.64■□□□□ 0.42
GARNL3-210ENST00000453030 SETD5Q9C0A6 1442 aa17.64■□□□□ 0.42
GARNL3-210ENST00000453030 ZNF772Q68DY9 489 aaPredicted RBP17.63■□□□□ 0.41
GARNL3-210ENST00000453030 DDX17Q92841 729 aaKnown RBP17.63■□□□□ 0.41
GARNL3-210ENST00000453030 SLC4A1APQ9BWU0 796 aaKnown RBP17.61■□□□□ 0.41
GARNL3-210ENST00000453030 LAMC1P11047 1609 aa17.61■□□□□ 0.41
GARNL3-210ENST00000453030 IFT172Q9UG01 1749 aa17.61■□□□□ 0.41
GARNL3-210ENST00000453030 ROBO2Q9HCK4 1378 aa17.6■□□□□ 0.41
GARNL3-210ENST00000453030 C1orf167Q5SNV9 1468 aa17.6■□□□□ 0.41
GARNL3-210ENST00000453030 PNPLA6Q8IY17 1366 aa17.58■□□□□ 0.4
GARNL3-210ENST00000453030 VGFO15240 615 aaPredicted RBP17.58■□□□□ 0.4
GARNL3-210ENST00000453030 PRAG1Q86YV5 1406 aa17.57■□□□□ 0.4
GARNL3-210ENST00000453030 AFF2P51816 1311 aa17.57■□□□□ 0.4
GARNL3-210ENST00000453030 FOXD1Q16676 465 aa17.56■□□□□ 0.4
GARNL3-210ENST00000453030 LRRC59Q96AG4 307 aaKnown RBP17.56■□□□□ 0.4
GARNL3-210ENST00000453030 CDC42BPGQ6DT37 1551 aa17.55■□□□□ 0.4
GARNL3-210ENST00000453030 C8orf37Q96NL8 207 aa17.55■□□□□ 0.4
GARNL3-210ENST00000453030 RPGRIP1LQ68CZ1 1315 aa17.54■□□□□ 0.4
GARNL3-210ENST00000453030 RXRBP28702 533 aa17.54■□□□□ 0.4
GARNL3-210ENST00000453030 CCDC144AA2RUR9 1427 aa17.54■□□□□ 0.4
GARNL3-210ENST00000453030 KNDC1Q76NI1 1749 aa17.53■□□□□ 0.4
GARNL3-210ENST00000453030 CDK12Q9NYV4 1490 aaPredicted RBP17.53■□□□□ 0.4
GARNL3-210ENST00000453030 ORAI2Q96SN7 254 aa17.52■□□□□ 0.4
GARNL3-210ENST00000453030 COL22A1Q8NFW1 1626 aaPredicted RBP17.51■□□□□ 0.39
GARNL3-210ENST00000453030 RGS12O14924 1447 aa17.51■□□□□ 0.39
GARNL3-210ENST00000453030 MARF1Q9Y4F3 1742 aaKnown RBP17.5■□□□□ 0.39
GARNL3-210ENST00000453030 ADAMTS2O95450 1211 aa17.5■□□□□ 0.39
GARNL3-210ENST00000453030 UPF1Q92900 1129 aaKnown RBP eCLIP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms