RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 ZFYVE9O95405 1425 aa18.15■□□□□ 0.5
HERC3-207ENST00000452979 ANKRD50Q9ULJ7 1429 aa18.15■□□□□ 0.5
HERC3-207ENST00000452979 CHD2O14647 1828 aaKnown RBP18.15■□□□□ 0.5
HERC3-207ENST00000452979 MYO5BQ9ULV0 1848 aa18.15■□□□□ 0.5
HERC3-207ENST00000452979 RBM33Q96EV2 1170 aaKnown RBP18.14■□□□□ 0.49
HERC3-207ENST00000452979 TMEM131LA2VDJ0 1609 aa18.13■□□□□ 0.49
HERC3-207ENST00000452979 HDGFP51858 240 aaKnown RBP18.13■□□□□ 0.49
HERC3-207ENST00000452979 PLEKHG1Q9ULL1 1385 aa18.13■□□□□ 0.49
HERC3-207ENST00000452979 GCC2Q8IWJ2 1684 aa18.12■□□□□ 0.49
HERC3-207ENST00000452979 FAM50AQ14320 339 aaKnown RBP18.11■□□□□ 0.49
HERC3-207ENST00000452979 BCANQ96GW7 911 aa18.11■□□□□ 0.49
HERC3-207ENST00000452979 SLAIN2Q9P270 581 aa18.11■□□□□ 0.49
HERC3-207ENST00000452979 MSH6P52701 1360 aa18.11■□□□□ 0.49
HERC3-207ENST00000452979 UNC13BO14795 1591 aa18.09■□□□□ 0.49
HERC3-207ENST00000452979 RIMS2Q9UQ26 1411 aa18.09■□□□□ 0.49
HERC3-207ENST00000452979 POTEAQ6S8J7 498 aa18.09■□□□□ 0.49
HERC3-207ENST00000452979 TBX22Q9Y458 520 aa18.09■□□□□ 0.49
HERC3-207ENST00000452979 NCOA3Q9Y6Q9 1424 aa18.08■□□□□ 0.49
HERC3-207ENST00000452979 PHLPP1O60346 1717 aa18.07■□□□□ 0.48
HERC3-207ENST00000452979 E9PCH4 1651 aa18.06■□□□□ 0.48
HERC3-207ENST00000452979 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.06■□□□□ 0.48
HERC3-207ENST00000452979 PPP1R15AO75807 674 aaPredicted RBP18.05■□□□□ 0.48
HERC3-207ENST00000452979 ROCK1Q13464 1354 aa18.04■□□□□ 0.48
HERC3-207ENST00000452979 JCADQ9P266 1359 aa18.04■□□□□ 0.48
HERC3-207ENST00000452979 ADAMTS13Q76LX8 1427 aa18.03■□□□□ 0.48
HERC3-207ENST00000452979 PIK3R4Q99570 1358 aa18.03■□□□□ 0.48
HERC3-207ENST00000452979 IQGAP3Q86VI3 1631 aa18.02■□□□□ 0.48
HERC3-207ENST00000452979 DIP2AQ14689 1571 aa18.02■□□□□ 0.48
HERC3-207ENST00000452979 COL16A1Q07092 1604 aaPredicted RBP18.01■□□□□ 0.47
HERC3-207ENST00000452979 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.01■□□□□ 0.47
HERC3-207ENST00000452979 CHGAP10645 457 aaKnown RBP17.99■□□□□ 0.47
HERC3-207ENST00000452979 C19orf44Q9H6X5 657 aa17.99■□□□□ 0.47
HERC3-207ENST00000452979 CADPS2Q86UW7 1296 aa17.98■□□□□ 0.47
HERC3-207ENST00000452979 NUTM2DQ5VT03 806 aaPredicted RBP17.97■□□□□ 0.47
HERC3-207ENST00000452979 AHDC1Q5TGY3 1603 aaPredicted RBP17.96■□□□□ 0.47
HERC3-207ENST00000452979 SPATA31A6Q5VVP1 1343 aa17.96■□□□□ 0.46
HERC3-207ENST00000452979 NUP155O75694 1391 aa17.95■□□□□ 0.46
HERC3-207ENST00000452979 TRPM2O94759 1503 aa17.95■□□□□ 0.46
HERC3-207ENST00000452979 ATF3P18847 181 aa17.95■□□□□ 0.46
HERC3-207ENST00000452979 C14orf37Q86TY3 774 aa17.95■□□□□ 0.46
HERC3-207ENST00000452979 SHPRHQ149N8 1683 aa17.94■□□□□ 0.46
HERC3-207ENST00000452979 AMOTL2Q9Y2J4 779 aa17.94■□□□□ 0.46
HERC3-207ENST00000452979 PTPRUQ92729 1446 aa17.93■□□□□ 0.46
HERC3-207ENST00000452979 LRP6O75581 1613 aa17.93■□□□□ 0.46
HERC3-207ENST00000452979 SETD1AO15047 1707 aaKnown RBP17.92■□□□□ 0.46
HERC3-207ENST00000452979 NRXN3Q9Y4C0 1643 aa17.91■□□□□ 0.46
HERC3-207ENST00000452979 SETBP1Q9Y6X0 1596 aa17.9■□□□□ 0.46
HERC3-207ENST00000452979 DCCP43146 1447 aa17.89■□□□□ 0.46
HERC3-207ENST00000452979 SPHKAPQ2M3C7 1700 aa17.89■□□□□ 0.46
HERC3-207ENST00000452979 XRN1Q8IZH2 1706 aaKnown RBP17.89■□□□□ 0.46
HERC3-207ENST00000452979 ZNF772Q68DY9 489 aaPredicted RBP17.89■□□□□ 0.45
HERC3-207ENST00000452979 BRINP3Q76B58 766 aa17.89■□□□□ 0.45
HERC3-207ENST00000452979 MEX3CQ5U5Q3 659 aaKnown RBP17.86■□□□□ 0.45
HERC3-207ENST00000452979 ITGAEP38570 1179 aa17.85■□□□□ 0.45
HERC3-207ENST00000452979 NHSL1Q5SYE7 1610 aa17.84■□□□□ 0.45
HERC3-207ENST00000452979 ASXL1Q8IXJ9 1541 aa17.84■□□□□ 0.45
HERC3-207ENST00000452979 MST1RQ04912 1400 aa17.84■□□□□ 0.45
HERC3-207ENST00000452979 SETD5Q9C0A6 1442 aa17.84■□□□□ 0.45
HERC3-207ENST00000452979 METP08581 1390 aa17.83■□□□□ 0.45
HERC3-207ENST00000452979 ZNF326Q5BKZ1 582 aaKnown RBP17.81■□□□□ 0.44
HERC3-207ENST00000452979 UPF1Q92900 1129 aaKnown RBP eCLIP17.81■□□□□ 0.44
HERC3-207ENST00000452979 NEXMIFQ5QGS0 1516 aa17.81■□□□□ 0.44
HERC3-207ENST00000452979 RXRBP28702 533 aa17.8■□□□□ 0.44
HERC3-207ENST00000452979 LRRC59Q96AG4 307 aaKnown RBP17.8■□□□□ 0.44
HERC3-207ENST00000452979 CLTCL1P53675 1640 aa17.8■□□□□ 0.44
HERC3-207ENST00000452979 TRIM52Q96A61 297 aa17.79■□□□□ 0.44
HERC3-207ENST00000452979 CDK12Q9NYV4 1490 aaPredicted RBP17.79■□□□□ 0.44
HERC3-207ENST00000452979 ADGRL3Q9HAR2 1447 aa17.79■□□□□ 0.44
HERC3-207ENST00000452979 KIF1BO60333 1816 aa17.79■□□□□ 0.44
HERC3-207ENST00000452979 NUTM2BA6NNL0 878 aaPredicted RBP17.78■□□□□ 0.44
HERC3-207ENST00000452979 NUTM2EB1AL46 878 aaPredicted RBP17.78■□□□□ 0.44
HERC3-207ENST00000452979 NUTM2AQ8IVF1 878 aaPredicted RBP17.78■□□□□ 0.44
HERC3-207ENST00000452979 NALCNQ8IZF0 1738 aa17.78■□□□□ 0.44
HERC3-207ENST00000452979 AFF2P51816 1311 aa17.75■□□□□ 0.43
HERC3-207ENST00000452979 LAMC1P11047 1609 aa17.75■□□□□ 0.43
HERC3-207ENST00000452979 PPARGC1BQ86YN6 1023 aaKnown RBP17.74■□□□□ 0.43
HERC3-207ENST00000452979 PNPLA6Q8IY17 1366 aa17.73■□□□□ 0.43
HERC3-207ENST00000452979 NAIPQ13075 1403 aa17.72■□□□□ 0.43
HERC3-207ENST00000452979 DDX17Q92841 729 aaKnown RBP17.72■□□□□ 0.43
HERC3-207ENST00000452979 RRBP1Q9P2E9 1410 aaKnown RBP17.72■□□□□ 0.43
HERC3-207ENST00000452979 C1orf167Q5SNV9 1468 aa17.71■□□□□ 0.43
HERC3-207ENST00000452979 VGFO15240 615 aaPredicted RBP17.71■□□□□ 0.43
HERC3-207ENST00000452979 PTCH1Q13635 1447 aa17.71■□□□□ 0.43
HERC3-207ENST00000452979 PRAG1Q86YV5 1406 aa17.71■□□□□ 0.43
HERC3-207ENST00000452979 RBM6P78332 1123 aaKnown RBP17.69■□□□□ 0.42
HERC3-207ENST00000452979 C8orf37Q96NL8 207 aa17.69■□□□□ 0.42
HERC3-207ENST00000452979 QTRT2Q9H974 415 aaKnown RBP17.69■□□□□ 0.42
HERC3-207ENST00000452979 RPGRIP1LQ68CZ1 1315 aa17.69■□□□□ 0.42
HERC3-207ENST00000452979 ROBO2Q9HCK4 1378 aa17.68■□□□□ 0.42
HERC3-207ENST00000452979 SOS2Q07890 1332 aaPredicted RBP17.68■□□□□ 0.42
HERC3-207ENST00000452979 PPLO60437 1756 aa17.66■□□□□ 0.42
HERC3-207ENST00000452979 RGS12O14924 1447 aa17.65■□□□□ 0.42
HERC3-207ENST00000452979 ORAI2Q96SN7 254 aa17.65■□□□□ 0.42
HERC3-207ENST00000452979 NGLY1Q96IV0 654 aa17.64■□□□□ 0.41
HERC3-207ENST00000452979 HFM1A2PYH4 1435 aa17.64■□□□□ 0.41
HERC3-207ENST00000452979 COL22A1Q8NFW1 1626 aaPredicted RBP17.63■□□□□ 0.41
HERC3-207ENST00000452979 ADAMTS2O95450 1211 aa17.62■□□□□ 0.41
HERC3-207ENST00000452979 FNBP4Q8N3X1 1017 aaPredicted RBP17.61■□□□□ 0.41
HERC3-207ENST00000452979 SLC4A1APQ9BWU0 796 aaKnown RBP17.61■□□□□ 0.41
HERC3-207ENST00000452979 USP21Q9UK80 565 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms