RNA–Protein interactions for RNA: ENST00000452906.3

HIGD1A-204, Transcript of HIG1 hypoxia inducible domain family member 1A, humanhuman

TSL 2 BASIC

Gene HIGD1A, Length 585 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIGD1A-204ENST00000452906 TMEM2Q9UHN6 1383 aa28.14■■■□□ 2.1
HIGD1A-204ENST00000452906 EID1Q9Y6B2 187 aa28.14■■■□□ 2.1
HIGD1A-204ENST00000452906 TXNDC2Q86VQ3 553 aa28.13■■■□□ 2.09
HIGD1A-204ENST00000452906 FOXD1Q16676 465 aa28.12■■■□□ 2.09
HIGD1A-204ENST00000452906 STAG3Q9UJ98 1225 aa28.12■■■□□ 2.09
HIGD1A-204ENST00000452906 E9PCH4 1651 aa28.12■■■□□ 2.09
HIGD1A-204ENST00000452906 ADGRB3O60242 1522 aa28.12■■■□□ 2.09
HIGD1A-204ENST00000452906 TOM1O60784 492 aa28.11■■■□□ 2.09
HIGD1A-204ENST00000452906 LTKP29376 864 aa28.11■■■□□ 2.09
HIGD1A-204ENST00000452906 IDI1Q13907 227 aa28.11■■■□□ 2.09
HIGD1A-204ENST00000452906 SLC52A1Q9NWF4 448 aa28.09■■■□□ 2.09
HIGD1A-204ENST00000452906 SPHKAPQ2M3C7 1700 aa28.08■■■□□ 2.09
HIGD1A-204ENST00000452906 LRRC7Q96NW7 1537 aa28.08■■■□□ 2.08
HIGD1A-204ENST00000452906 DISP3Q9P2K9 1392 aa28.06■■■□□ 2.08
HIGD1A-204ENST00000452906 CCDC144AA2RUR9 1427 aa28.06■■■□□ 2.08
HIGD1A-204ENST00000452906 MYO5BQ9ULV0 1848 aa28.04■■■□□ 2.08
HIGD1A-204ENST00000452906 PPP1R15AO75807 674 aaPredicted RBP28.03■■■□□ 2.08
HIGD1A-204ENST00000452906 TRPM2O94759 1503 aa28.02■■■□□ 2.08
HIGD1A-204ENST00000452906 ALKQ9UM73 1620 aa28.01■■■□□ 2.07
HIGD1A-204ENST00000452906 XIRP1Q702N8 1843 aaKnown RBP27.99■■■□□ 2.07
HIGD1A-204ENST00000452906 SCAF1Q9H7N4 1312 aaKnown RBP27.98■■■□□ 2.07
HIGD1A-204ENST00000452906 PIP4K2BP78356 416 aa27.98■■■□□ 2.07
HIGD1A-204ENST00000452906 TMEM131LA2VDJ0 1609 aa27.97■■■□□ 2.07
HIGD1A-204ENST00000452906 ZFYVE9O95405 1425 aa27.92■■■□□ 2.06
HIGD1A-204ENST00000452906 L3MBTL2Q969R5 705 aa27.92■■■□□ 2.06
HIGD1A-204ENST00000452906 HSPA1LP34931 641 aa27.91■■■□□ 2.06
HIGD1A-204ENST00000452906 ZNF316A6NFI3 1004 aaPredicted RBP27.9■■■□□ 2.06
HIGD1A-204ENST00000452906 NWD1Q149M9 1564 aa27.9■■■□□ 2.06
HIGD1A-204ENST00000452906 HDGFP51858 240 aaKnown RBP27.89■■■□□ 2.06
HIGD1A-204ENST00000452906 KCNA6P17658 529 aa27.88■■■□□ 2.05
HIGD1A-204ENST00000452906 PLEKHG1Q9ULL1 1385 aa27.87■■■□□ 2.05
HIGD1A-204ENST00000452906 RIMS2Q9UQ26 1411 aa27.87■■■□□ 2.05
HIGD1A-204ENST00000452906 NKTRP30414 1462 aaKnown RBP27.87■■■□□ 2.05
HIGD1A-204ENST00000452906 KIF1BO60333 1816 aa27.87■■■□□ 2.05
HIGD1A-204ENST00000452906 CLTCL1P53675 1640 aa27.85■■■□□ 2.05
HIGD1A-204ENST00000452906 SLC26A8Q96RN1 970 aa27.85■■■□□ 2.05
HIGD1A-204ENST00000452906 CHD2O14647 1828 aaKnown RBP27.85■■■□□ 2.05
HIGD1A-204ENST00000452906 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.82■■■□□ 2.04
HIGD1A-204ENST00000452906 ILDR2Q71H61 639 aa27.81■■■□□ 2.04
HIGD1A-204ENST00000452906 BCANQ96GW7 911 aa27.81■■■□□ 2.04
HIGD1A-204ENST00000452906 TMEM94Q12767 1356 aa27.81■■■□□ 2.04
HIGD1A-204ENST00000452906 DIP2AQ14689 1571 aa27.79■■■□□ 2.04
HIGD1A-204ENST00000452906 MED1Q15648 1581 aaPredicted RBP27.79■■■□□ 2.04
HIGD1A-204ENST00000452906 STAC3Q96MF2 364 aa27.79■■■□□ 2.04
HIGD1A-204ENST00000452906 CHGAP10645 457 aaKnown RBP27.78■■■□□ 2.04
HIGD1A-204ENST00000452906 SPATA31E1Q6ZUB1 1445 aa27.76■■■□□ 2.04
HIGD1A-204ENST00000452906 PROSER2Q86WR7 435 aaPredicted RBP27.75■■■□□ 2.03
HIGD1A-204ENST00000452906 TBX22Q9Y458 520 aa27.74■■■□□ 2.03
HIGD1A-204ENST00000452906 FAM135BQ49AJ0 1406 aa27.72■■■□□ 2.03
HIGD1A-204ENST00000452906 ADAMTS13Q76LX8 1427 aa27.71■■■□□ 2.03
HIGD1A-204ENST00000452906 RALGAPBQ86X10 1494 aa27.7■■■□□ 2.03
HIGD1A-204ENST00000452906 PIK3R4Q99570 1358 aa27.7■■■□□ 2.02
HIGD1A-204ENST00000452906 SOCS7O14512 581 aa27.69■■■□□ 2.02
HIGD1A-204ENST00000452906 DCAF11Q8TEB1 546 aa27.69■■■□□ 2.02
HIGD1A-204ENST00000452906 MSH6P52701 1360 aa27.68■■■□□ 2.02
HIGD1A-204ENST00000452906 ROBO1Q9Y6N7 1651 aa27.67■■■□□ 2.02
HIGD1A-204ENST00000452906 NCOA3Q9Y6Q9 1424 aa27.67■■■□□ 2.02
HIGD1A-204ENST00000452906 IFT172Q9UG01 1749 aa27.66■■■□□ 2.02
HIGD1A-204ENST00000452906 PRAG1Q86YV5 1406 aa27.65■■■□□ 2.02
HIGD1A-204ENST00000452906 TRPM1Q7Z4N2 1603 aa27.64■■■□□ 2.02
HIGD1A-204ENST00000452906 NBPF8Q3BBV2 869 aa27.64■■■□□ 2.02
HIGD1A-204ENST00000452906 RGL3Q3MIN7 710 aa27.64■■■□□ 2.02
HIGD1A-204ENST00000452906 SENP3Q9H4L4 574 aaPredicted RBP27.64■■■□□ 2.02
HIGD1A-204ENST00000452906 SETBP1Q9Y6X0 1596 aa27.64■■■□□ 2.01
HIGD1A-204ENST00000452906 NUTM2DQ5VT03 806 aaPredicted RBP27.63■■■□□ 2.01
HIGD1A-204ENST00000452906 MYOM2P54296 1465 aa27.63■■■□□ 2.01
HIGD1A-204ENST00000452906 LAMC1P11047 1609 aa27.63■■■□□ 2.01
HIGD1A-204ENST00000452906 RBM33Q96EV2 1170 aaKnown RBP27.62■■■□□ 2.01
HIGD1A-204ENST00000452906 NRXN3Q9Y4C0 1643 aa27.62■■■□□ 2.01
HIGD1A-204ENST00000452906 EIF4G2P78344 907 aaKnown RBP eCLIP27.61■■■□□ 2.01
HIGD1A-204ENST00000452906 ZNF326Q5BKZ1 582 aaKnown RBP27.6■■■□□ 2.01
HIGD1A-204ENST00000452906 KIAA1210Q9ULL0 1709 aa27.59■■■□□ 2.01
HIGD1A-204ENST00000452906 KDM2AQ9Y2K7 1162 aa27.59■■■□□ 2.01
HIGD1A-204ENST00000452906 RPGRIP1LQ68CZ1 1315 aa27.58■■■□□ 2.01
HIGD1A-204ENST00000452906 PPLO60437 1756 aa27.58■■■□□ 2
HIGD1A-204ENST00000452906 NEXMIFQ5QGS0 1516 aa27.57■■■□□ 2
HIGD1A-204ENST00000452906 XRN1Q8IZH2 1706 aaKnown RBP27.56■■■□□ 2
HIGD1A-204ENST00000452906 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.55■■■□□ 2
HIGD1A-204ENST00000452906 PHF23Q9BUL5 403 aaPredicted RBP27.55■■■□□ 2
HIGD1A-204ENST00000452906 SLAIN2Q9P270 581 aa27.55■■■□□ 2
HIGD1A-204ENST00000452906 PHLPP1O60346 1717 aa27.53■■■□□ 2
HIGD1A-204ENST00000452906 DIEXFQ68CQ4 756 aaKnown RBP27.52■■■□□ 2
HIGD1A-204ENST00000452906 PTPRUQ92729 1446 aa27.51■■□□□ 1.99
HIGD1A-204ENST00000452906 ROCK2O75116 1388 aaKnown RBP27.51■■□□□ 1.99
HIGD1A-204ENST00000452906 AMOTL2Q9Y2J4 779 aa27.51■■□□□ 1.99
HIGD1A-204ENST00000452906 GPRASP1Q5JY77 1395 aa27.5■■□□□ 1.99
HIGD1A-204ENST00000452906 C14orf37Q86TY3 774 aa27.5■■□□□ 1.99
HIGD1A-204ENST00000452906 C19orf44Q9H6X5 657 aa27.5■■□□□ 1.99
HIGD1A-204ENST00000452906 HSPA5P11021 654 aaKnown RBP27.48■■□□□ 1.99
HIGD1A-204ENST00000452906 CADPS2Q86UW7 1296 aa27.48■■□□□ 1.99
HIGD1A-204ENST00000452906 NRXN1Q9ULB1 1477 aa27.47■■□□□ 1.99
HIGD1A-204ENST00000452906 DCCP43146 1447 aa27.47■■□□□ 1.99
HIGD1A-204ENST00000452906 USP47Q96K76 1375 aa27.47■■□□□ 1.99
HIGD1A-204ENST00000452906 CARD11Q9BXL7 1154 aa27.46■■□□□ 1.99
HIGD1A-204ENST00000452906 ATF3P18847 181 aa27.44■■□□□ 1.98
HIGD1A-204ENST00000452906 VGFO15240 615 aaPredicted RBP27.43■■□□□ 1.98
HIGD1A-204ENST00000452906 METP08581 1390 aa27.43■■□□□ 1.98
HIGD1A-204ENST00000452906 COL16A1Q07092 1604 aaPredicted RBP27.42■■□□□ 1.98
HIGD1A-204ENST00000452906 SETD1AO15047 1707 aaKnown RBP27.42■■□□□ 1.98
HIGD1A-204ENST00000452906 AHDC1Q5TGY3 1603 aaPredicted RBP27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms