RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 SULF1Q8IWU6 871 aa10.38□□□□□ -0.75
HMGB1P26-201ENST00000452520 DDX11L8A8MPP1 907 aa10.37□□□□□ -0.75
HMGB1P26-201ENST00000452520 ADGRD1Q6QNK2 874 aa10.37□□□□□ -0.75
HMGB1P26-201ENST00000452520 LAPTM4BQ86VI4 370 aa10.37□□□□□ -0.75
HMGB1P26-201ENST00000452520 CD46P15529 392 aa10.36□□□□□ -0.75
HMGB1P26-201ENST00000452520 HDGFP51858 240 aaKnown RBP10.36□□□□□ -0.75
HMGB1P26-201ENST00000452520 NBPF3Q9H094 633 aa10.36□□□□□ -0.75
HMGB1P26-201ENST00000452520 RSPH6AQ9H0K4 717 aa10.36□□□□□ -0.75
HMGB1P26-201ENST00000452520 SWT1Q5T5J6 900 aaKnown RBP10.35□□□□□ -0.75
HMGB1P26-201ENST00000452520 ANKRD13DQ6ZTN6 518 aa10.34□□□□□ -0.75
HMGB1P26-201ENST00000452520 HRO43593 1189 aa10.33□□□□□ -0.76
HMGB1P26-201ENST00000452520 SKIV2LQ15477 1246 aaKnown RBP10.33□□□□□ -0.76
HMGB1P26-201ENST00000452520 SH3D19Q5HYK7 790 aa10.33□□□□□ -0.76
HMGB1P26-201ENST00000452520 MRPL50Q8N5N7 158 aaKnown RBP10.33□□□□□ -0.76
HMGB1P26-201ENST00000452520 RSPH4AQ5TD94 716 aa10.32□□□□□ -0.76
HMGB1P26-201ENST00000452520 RDH13Q8NBN7 331 aa10.32□□□□□ -0.76
HMGB1P26-201ENST00000452520 ZFRQ96KR1 1074 aaKnown RBP10.32□□□□□ -0.76
HMGB1P26-201ENST00000452520 TBC1D2Q9BYX2 928 aa10.32□□□□□ -0.76
HMGB1P26-201ENST00000452520 DIXDC1Q155Q3 683 aa10.31□□□□□ -0.76
HMGB1P26-201ENST00000452520 SAMD7Q7Z3H4 446 aa10.31□□□□□ -0.76
HMGB1P26-201ENST00000452520 SPIRE2Q8WWL2 714 aa10.31□□□□□ -0.76
HMGB1P26-201ENST00000452520 PCMTD1Q96MG8 357 aaPredicted RBP10.31□□□□□ -0.76
HMGB1P26-201ENST00000452520 SLC10A3P09131 477 aa10.3□□□□□ -0.76
HMGB1P26-201ENST00000452520 MYSM1Q5VVJ2 828 aa10.3□□□□□ -0.76
HMGB1P26-201ENST00000452520 POLR3EQ9NVU0 708 aa10.3□□□□□ -0.76
HMGB1P26-201ENST00000452520 STAC3Q96MF2 364 aa10.29□□□□□ -0.76
HMGB1P26-201ENST00000452520 GCGRP47871 477 aa10.28□□□□□ -0.76
HMGB1P26-201ENST00000452520 SLC4A3P48751 1232 aa10.28□□□□□ -0.76
HMGB1P26-201ENST00000452520 NUTM1Q86Y26 1132 aa10.28□□□□□ -0.76
HMGB1P26-201ENST00000452520 SLF2Q8IX21 1173 aa10.28□□□□□ -0.76
HMGB1P26-201ENST00000452520 PROCA1Q8NCQ7 364 aaPredicted RBP10.27□□□□□ -0.77
HMGB1P26-201ENST00000452520 KRTAP3-3Q9BYR6 98 aa10.27□□□□□ -0.77
HMGB1P26-201ENST00000452520 KRTAP3-2Q9BYR7 98 aa10.27□□□□□ -0.77
HMGB1P26-201ENST00000452520 KDM4AO75164 1064 aa10.25□□□□□ -0.77
HMGB1P26-201ENST00000452520 RIC3Q7Z5B4 369 aa10.25□□□□□ -0.77
HMGB1P26-201ENST00000452520 ATP1B4Q9UN42 357 aaPredicted RBP10.24□□□□□ -0.77
HMGB1P26-201ENST00000452520 MOXD2PA6NHM9 499 aa10.23□□□□□ -0.77
HMGB1P26-201ENST00000452520 GOLGA8CPA6NN73 597 aa10.23□□□□□ -0.77
HMGB1P26-201ENST00000452520 CLK2P49760 499 aaKnown RBP10.23□□□□□ -0.77
HMGB1P26-201ENST00000452520 POTEGQ6S5H5 508 aa10.23□□□□□ -0.77
HMGB1P26-201ENST00000452520 LRCH3Q96II8 777 aa10.23□□□□□ -0.77
HMGB1P26-201ENST00000452520 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.23□□□□□ -0.77
HMGB1P26-201ENST00000452520 SPTLC1O15269 473 aa10.22□□□□□ -0.77
HMGB1P26-201ENST00000452520 RNF40O75150 1001 aa10.22□□□□□ -0.77
HMGB1P26-201ENST00000452520 USP46P62068 366 aa10.22□□□□□ -0.77
HMGB1P26-201ENST00000452520 ERICH6Q7L0X2 663 aa10.22□□□□□ -0.77
HMGB1P26-201ENST00000452520 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.22□□□□□ -0.77
HMGB1P26-201ENST00000452520 LIMD1Q9UGP4 676 aa10.22□□□□□ -0.77
HMGB1P26-201ENST00000452520 TIMELESSQ9UNS1 1208 aa10.22□□□□□ -0.77
HMGB1P26-201ENST00000452520 NDUFV2P19404 249 aa10.21□□□□□ -0.77
HMGB1P26-201ENST00000452520 GJA5P36382 358 aa10.21□□□□□ -0.77
HMGB1P26-201ENST00000452520 ANKK1Q8NFD2 765 aa10.21□□□□□ -0.77
HMGB1P26-201ENST00000452520 POTEMA6NI47 508 aa10.2□□□□□ -0.78
HMGB1P26-201ENST00000452520 TUSC1Q2TAM9 212 aa10.2□□□□□ -0.78
HMGB1P26-201ENST00000452520 RSBN1LQ6PCB5 846 aaPredicted RBP10.2□□□□□ -0.78
HMGB1P26-201ENST00000452520 CDAN1Q8IWY9 1227 aa10.2□□□□□ -0.78
HMGB1P26-201ENST00000452520 SOWAHBA6NEL2 793 aa10.19□□□□□ -0.78
HMGB1P26-201ENST00000452520 CFHP08603 1231 aa10.19□□□□□ -0.78
HMGB1P26-201ENST00000452520 WNT2BQ93097 391 aa10.19□□□□□ -0.78
HMGB1P26-201ENST00000452520 HOXA2O43364 376 aa10.18□□□□□ -0.78
HMGB1P26-201ENST00000452520 C14orf37Q86TY3 774 aa10.18□□□□□ -0.78
HMGB1P26-201ENST00000452520 NECTIN2Q92692 538 aa10.18□□□□□ -0.78
HMGB1P26-201ENST00000452520 PCDHB15Q9Y5E8 787 aa10.18□□□□□ -0.78
HMGB1P26-201ENST00000452520 BCAMP50895 628 aa10.17□□□□□ -0.78
HMGB1P26-201ENST00000452520 PPP4CP60510 307 aa10.17□□□□□ -0.78
HMGB1P26-201ENST00000452520 FUT2Q10981 343 aa10.17□□□□□ -0.78
HMGB1P26-201ENST00000452520 FDX1P10109 184 aa10.15□□□□□ -0.78
HMGB1P26-201ENST00000452520 ATP6V1AP38606 617 aa10.15□□□□□ -0.78
HMGB1P26-201ENST00000452520 CSPP1Q1MSJ5 1256 aa10.15□□□□□ -0.78
HMGB1P26-201ENST00000452520 KMT5BQ4FZB7 885 aa10.15□□□□□ -0.78
HMGB1P26-201ENST00000452520 GRIPAP1Q4V328 841 aa10.15□□□□□ -0.78
HMGB1P26-201ENST00000452520 FBXO31Q5XUX0 539 aaPredicted RBP10.15□□□□□ -0.78
HMGB1P26-201ENST00000452520 TSR3Q9UJK0 312 aaKnown RBP10.15□□□□□ -0.78
HMGB1P26-201ENST00000452520 HPS5Q9UPZ3 1129 aa10.15□□□□□ -0.78
HMGB1P26-201ENST00000452520 ACTN4O43707 911 aaKnown RBP10.14□□□□□ -0.79
HMGB1P26-201ENST00000452520 PPP2R2DQ66LE6 453 aa10.14□□□□□ -0.79
HMGB1P26-201ENST00000452520 HLA-CQ95604 372 aa10.14□□□□□ -0.79
HMGB1P26-201ENST00000452520 PCDHGC3Q9UN70 934 aa10.14□□□□□ -0.79
HMGB1P26-201ENST00000452520 LILRB3O75022 631 aa10.13□□□□□ -0.79
HMGB1P26-201ENST00000452520 QPCTQ16769 361 aa10.13□□□□□ -0.79
HMGB1P26-201ENST00000452520 RFC5P40937 340 aa10.12□□□□□ -0.79
HMGB1P26-201ENST00000452520 GUCA2AQ02747 115 aa10.12□□□□□ -0.79
HMGB1P26-201ENST00000452520 PRPF38BQ5VTL8 546 aaKnown RBP10.12□□□□□ -0.79
HMGB1P26-201ENST00000452520 PRR14Q9BWN1 585 aa10.12□□□□□ -0.79
HMGB1P26-201ENST00000452520 FLIIQ13045 1269 aa10.11□□□□□ -0.79
HMGB1P26-201ENST00000452520 NUTM2BA6NNL0 878 aaPredicted RBP10.1□□□□□ -0.79
HMGB1P26-201ENST00000452520 NUTM2EB1AL46 878 aaPredicted RBP10.1□□□□□ -0.79
HMGB1P26-201ENST00000452520 APLP1P51693 650 aa10.1□□□□□ -0.79
HMGB1P26-201ENST00000452520 RTL5Q5HYW3 569 aaPredicted RBP10.1□□□□□ -0.79
HMGB1P26-201ENST00000452520 NUTM2DQ5VT03 806 aaPredicted RBP10.1□□□□□ -0.79
HMGB1P26-201ENST00000452520 NUTM2AQ8IVF1 878 aaPredicted RBP10.1□□□□□ -0.79
HMGB1P26-201ENST00000452520 CABLES1Q8TDN4 633 aa10.1□□□□□ -0.79
HMGB1P26-201ENST00000452520 WBP1LQ9NX94 342 aa10.1□□□□□ -0.79
HMGB1P26-201ENST00000452520 HRCP23327 699 aa10.09□□□□□ -0.79
HMGB1P26-201ENST00000452520 PUS10Q3MIT2 529 aaKnown RBP10.09□□□□□ -0.79
HMGB1P26-201ENST00000452520 TMEM259Q4ZIN3 620 aa10.09□□□□□ -0.79
HMGB1P26-201ENST00000452520 MORN1Q5T089 497 aa10.09□□□□□ -0.79
HMGB1P26-201ENST00000452520 THSD4Q6ZMP0 1018 aa10.09□□□□□ -0.79
HMGB1P26-201ENST00000452520 KCTD12Q96CX2 325 aaKnown RBP10.09□□□□□ -0.79
HMGB1P26-201ENST00000452520 ZBTB3Q9H5J0 574 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms