RNA–Protein interactions for RNA: ENST00000451521.6

CCHCR1-208, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-208ENST00000451521 KTN1Q86UP2 1357 aaKnown RBP20.86■□□□□ 0.93
CCHCR1-208ENST00000451521 HNRNPUQ00839 825 aaKnown RBP eCLIP20.86■□□□□ 0.93
CCHCR1-208ENST00000451521 ADGRB3O60242 1522 aa20.86■□□□□ 0.93
CCHCR1-208ENST00000451521 CAMSAP1Q5T5Y3 1602 aa20.85■□□□□ 0.93
CCHCR1-208ENST00000451521 DISP3Q9P2K9 1392 aa20.85■□□□□ 0.93
CCHCR1-208ENST00000451521 SCAF11Q99590 1463 aaKnown RBP20.84■□□□□ 0.93
CCHCR1-208ENST00000451521 ZMYM4Q5VZL5 1548 aa20.84■□□□□ 0.93
CCHCR1-208ENST00000451521 ERICH6Q7L0X2 663 aa20.84■□□□□ 0.93
CCHCR1-208ENST00000451521 NRXN1Q9ULB1 1477 aa20.84■□□□□ 0.93
CCHCR1-208ENST00000451521 ZC3H13Q5T200 1668 aaKnown RBP20.83■□□□□ 0.93
CCHCR1-208ENST00000451521 TMF1P82094 1093 aa20.82■□□□□ 0.92
CCHCR1-208ENST00000451521 KIF13AQ9H1H9 1805 aa20.81■□□□□ 0.92
CCHCR1-208ENST00000451521 WASHC2CQ9Y4E1 1318 aa20.8■□□□□ 0.92
CCHCR1-208ENST00000451521 SIGLEC1Q9BZZ2 1709 aa20.8■□□□□ 0.92
CCHCR1-208ENST00000451521 NOS1P29475 1434 aa20.8■□□□□ 0.92
CCHCR1-208ENST00000451521 ARHGAP31Q2M1Z3 1444 aa20.79■□□□□ 0.92
CCHCR1-208ENST00000451521 FAM9BQ8IZU0 186 aa20.79■□□□□ 0.92
CCHCR1-208ENST00000451521 RALBP1Q15311 655 aa20.79■□□□□ 0.92
CCHCR1-208ENST00000451521 PPLO60437 1756 aa20.78■□□□□ 0.92
CCHCR1-208ENST00000451521 PER1O15534 1290 aaPredicted RBP20.78■□□□□ 0.92
CCHCR1-208ENST00000451521 PIK3C2BO00750 1634 aa20.78■□□□□ 0.92
CCHCR1-208ENST00000451521 SENP3Q9H4L4 574 aaPredicted RBP20.78■□□□□ 0.92
CCHCR1-208ENST00000451521 ADGRF5Q8IZF2 1346 aa20.76■□□□□ 0.91
CCHCR1-208ENST00000451521 CNGB1Q14028 1251 aaPredicted RBP20.76■□□□□ 0.91
CCHCR1-208ENST00000451521 EIF3AQ14152 1382 aaKnown RBP20.75■□□□□ 0.91
CCHCR1-208ENST00000451521 MLECQ14165 292 aa20.75■□□□□ 0.91
CCHCR1-208ENST00000451521 MYBBP1AQ9BQG0 1328 aaKnown RBP20.75■□□□□ 0.91
CCHCR1-208ENST00000451521 PARD3Q8TEW0 1356 aa20.74■□□□□ 0.91
CCHCR1-208ENST00000451521 SYNMO15061 1565 aa20.74■□□□□ 0.91
CCHCR1-208ENST00000451521 CHGAP10645 457 aaKnown RBP20.74■□□□□ 0.91
CCHCR1-208ENST00000451521 ZBED9Q6R2W3 1325 aa20.74■□□□□ 0.91
CCHCR1-208ENST00000451521 FANCIQ9NVI1 1328 aa20.74■□□□□ 0.91
CCHCR1-208ENST00000451521 SETBP1Q9Y6X0 1596 aa20.74■□□□□ 0.91
CCHCR1-208ENST00000451521 BRD4O60885 1362 aaPredicted RBP20.73■□□□□ 0.91
CCHCR1-208ENST00000451521 REREQ9P2R6 1566 aa20.72■□□□□ 0.91
CCHCR1-208ENST00000451521 RPGRIP1LQ68CZ1 1315 aa20.72■□□□□ 0.91
CCHCR1-208ENST00000451521 CFAP70Q5T0N1 1121 aa20.72■□□□□ 0.91
CCHCR1-208ENST00000451521 MYO3AQ8NEV4 1616 aa20.71■□□□□ 0.91
CCHCR1-208ENST00000451521 PNISRQ8TF01 805 aaKnown RBP20.71■□□□□ 0.91
CCHCR1-208ENST00000451521 PIK3C2GO75747 1445 aa20.7■□□□□ 0.9
CCHCR1-208ENST00000451521 CDCA8Q53HL2 280 aa20.7■□□□□ 0.9
CCHCR1-208ENST00000451521 PANK3Q9H999 370 aa20.69■□□□□ 0.9
CCHCR1-208ENST00000451521 SLC24A1O60721 1099 aa20.68■□□□□ 0.9
CCHCR1-208ENST00000451521 TRHP20396 242 aaPredicted RBP20.68■□□□□ 0.9
CCHCR1-208ENST00000451521 NUTM2DQ5VT03 806 aaPredicted RBP20.68■□□□□ 0.9
CCHCR1-208ENST00000451521 TMC1Q8TDI8 760 aa20.68■□□□□ 0.9
CCHCR1-208ENST00000451521 LRPPRCP42704 1394 aaKnown RBP20.67■□□□□ 0.9
CCHCR1-208ENST00000451521 AGLP35573 1532 aa20.67■□□□□ 0.9
CCHCR1-208ENST00000451521 MYOM1P52179 1685 aa20.67■□□□□ 0.9
CCHCR1-208ENST00000451521 PREX1Q8TCU6 1659 aa20.66■□□□□ 0.9
CCHCR1-208ENST00000451521 KDM5AP29375 1690 aaKnown RBP20.66■□□□□ 0.9
CCHCR1-208ENST00000451521 NEXMIFQ5QGS0 1516 aa20.64■□□□□ 0.9
CCHCR1-208ENST00000451521 NLRP13Q86W25 1043 aa20.64■□□□□ 0.9
CCHCR1-208ENST00000451521 C14orf93Q9H972 538 aaKnown RBP20.64■□□□□ 0.9
CCHCR1-208ENST00000451521 ADGRB1O14514 1584 aa20.64■□□□□ 0.89
CCHCR1-208ENST00000451521 SBNO2Q9Y2G9 1366 aa20.64■□□□□ 0.89
CCHCR1-208ENST00000451521 FBXO31Q5XUX0 539 aaPredicted RBP20.62■□□□□ 0.89
CCHCR1-208ENST00000451521 ERVK-7P63135 1459 aa20.62■□□□□ 0.89
CCHCR1-208ENST00000451521 SLC52A1Q9NWF4 448 aa20.62■□□□□ 0.89
CCHCR1-208ENST00000451521 ANO8Q9HCE9 1232 aaPredicted RBP20.61■□□□□ 0.89
CCHCR1-208ENST00000451521 PPP6R1Q9UPN7 881 aa20.6■□□□□ 0.89
CCHCR1-208ENST00000451521 ZFYVE9O95405 1425 aa20.59■□□□□ 0.89
CCHCR1-208ENST00000451521 IDI1Q13907 227 aa20.59■□□□□ 0.89
CCHCR1-208ENST00000451521 TMEM131LA2VDJ0 1609 aa20.59■□□□□ 0.89
CCHCR1-208ENST00000451521 MYO5BQ9ULV0 1848 aa20.57■□□□□ 0.88
CCHCR1-208ENST00000451521 VGFO15240 615 aaPredicted RBP20.57■□□□□ 0.88
CCHCR1-208ENST00000451521 CC2D1BQ5T0F9 858 aaKnown RBP20.57■□□□□ 0.88
CCHCR1-208ENST00000451521 IRX6P78412 446 aaPredicted RBP20.56■□□□□ 0.88
CCHCR1-208ENST00000451521 NPC1L1Q9UHC9 1359 aa20.56■□□□□ 0.88
CCHCR1-208ENST00000451521 QRICH2Q9H0J4 1663 aa20.55■□□□□ 0.88
CCHCR1-208ENST00000451521 INSRP06213 1382 aa20.55■□□□□ 0.88
CCHCR1-208ENST00000451521 ASXL1Q8IXJ9 1541 aa20.55■□□□□ 0.88
CCHCR1-208ENST00000451521 ARHGEF40Q8TER5 1519 aa20.55■□□□□ 0.88
CCHCR1-208ENST00000451521 SMG6Q86US8 1419 aaKnown RBP20.55■□□□□ 0.88
CCHCR1-208ENST00000451521 CENPJQ9HC77 1338 aaPredicted RBP20.55■□□□□ 0.88
CCHCR1-208ENST00000451521 AMER1Q5JTC6 1135 aaPredicted RBP20.54■□□□□ 0.88
CCHCR1-208ENST00000451521 KNSTRNQ9Y448 316 aa20.54■□□□□ 0.88
CCHCR1-208ENST00000451521 PLPPR3Q6T4P5 718 aa20.53■□□□□ 0.88
CCHCR1-208ENST00000451521 CLTCQ00610 1675 aaKnown RBP20.52■□□□□ 0.88
CCHCR1-208ENST00000451521 DEKP35659 375 aaKnown RBP20.51■□□□□ 0.87
CCHCR1-208ENST00000451521 ARHGEF28Q8N1W1 1705 aaKnown RBP20.51■□□□□ 0.87
CCHCR1-208ENST00000451521 TRAK1Q9UPV9 953 aa20.49■□□□□ 0.87
CCHCR1-208ENST00000451521 SPATA31D1Q6ZQQ2 1576 aa20.49■□□□□ 0.87
CCHCR1-208ENST00000451521 TMEM132EQ6IEE7 984 aa20.48■□□□□ 0.87
CCHCR1-208ENST00000451521 ERICH6BQ5W0A0 696 aa20.47■□□□□ 0.87
CCHCR1-208ENST00000451521 NUDCQ9Y266 331 aa20.47■□□□□ 0.87
CCHCR1-208ENST00000451521 BLMP54132 1417 aaPredicted RBP20.46■□□□□ 0.87
CCHCR1-208ENST00000451521 PPP2R1AP30153 589 aa20.45■□□□□ 0.86
CCHCR1-208ENST00000451521 PUS7Q96PZ0 661 aaKnown RBP20.44■□□□□ 0.86
CCHCR1-208ENST00000451521 PPP4R2Q9NY27 417 aa20.42■□□□□ 0.86
CCHCR1-208ENST00000451521 CARD14Q9BXL6 1004 aa20.42■□□□□ 0.86
CCHCR1-208ENST00000451521 TULP4Q9NRJ4 1543 aa20.4■□□□□ 0.86
CCHCR1-208ENST00000451521 RNF123Q5XPI4 1314 aa20.39■□□□□ 0.86
CCHCR1-208ENST00000451521 A2ML1A8K2U0 1454 aa20.39■□□□□ 0.85
CCHCR1-208ENST00000451521 CEBPAP49715 358 aaPredicted RBP20.39■□□□□ 0.85
CCHCR1-208ENST00000451521 USP32Q8NFA0 1604 aa20.38■□□□□ 0.85
CCHCR1-208ENST00000451521 ESF1Q9H501 851 aaKnown RBP20.38■□□□□ 0.85
CCHCR1-208ENST00000451521 STAG3Q9UJ98 1225 aa20.38■□□□□ 0.85
CCHCR1-208ENST00000451521 ALKQ9UM73 1620 aa20.38■□□□□ 0.85
CCHCR1-208ENST00000451521 SENP3-EIF4A1A0A087X0R7 540 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms