RNA–Protein interactions for RNA: ENST00000450512.1

LYSMD4-205, Transcript of LysM domain containing 4, humanhuman

TSL 4

Gene LYSMD4, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-205ENST00000450512 ZFYVE9O95405 1425 aa34.57■■■■□ 3.13
LYSMD4-205ENST00000450512 HDGFP51858 240 aaKnown RBP34.57■■■■□ 3.12
LYSMD4-205ENST00000450512 RIMS2Q9UQ26 1411 aa34.56■■■■□ 3.12
LYSMD4-205ENST00000450512 MYO5BQ9ULV0 1848 aa34.56■■■■□ 3.12
LYSMD4-205ENST00000450512 KCNA6P17658 529 aa34.56■■■■□ 3.12
LYSMD4-205ENST00000450512 PPP1R15AO75807 674 aaPredicted RBP34.54■■■■□ 3.12
LYSMD4-205ENST00000450512 SENP3Q9H4L4 574 aaPredicted RBP34.52■■■■□ 3.12
LYSMD4-205ENST00000450512 PLEKHG1Q9ULL1 1385 aa34.51■■■■□ 3.12
LYSMD4-205ENST00000450512 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.49■■■■□ 3.11
LYSMD4-205ENST00000450512 XIRP1Q702N8 1843 aaKnown RBP34.48■■■■□ 3.11
LYSMD4-205ENST00000450512 ILDR2Q71H61 639 aa34.47■■■■□ 3.11
LYSMD4-205ENST00000450512 TMEM94Q12767 1356 aa34.47■■■■□ 3.11
LYSMD4-205ENST00000450512 PROSER2Q86WR7 435 aaPredicted RBP34.46■■■■□ 3.11
LYSMD4-205ENST00000450512 NAIPQ13075 1403 aa34.46■■■■□ 3.11
LYSMD4-205ENST00000450512 NUTM2DQ5VT03 806 aaPredicted RBP34.42■■■■□ 3.1
LYSMD4-205ENST00000450512 NWD1Q149M9 1564 aa34.41■■■■□ 3.1
LYSMD4-205ENST00000450512 NKTRP30414 1462 aaKnown RBP34.4■■■■□ 3.1
LYSMD4-205ENST00000450512 RBM33Q96EV2 1170 aaKnown RBP34.4■■■■□ 3.1
LYSMD4-205ENST00000450512 TBX22Q9Y458 520 aa34.39■■■■□ 3.1
LYSMD4-205ENST00000450512 SPHKAPQ2M3C7 1700 aa34.38■■■■□ 3.09
LYSMD4-205ENST00000450512 HFM1A2PYH4 1435 aa34.34■■■■□ 3.09
LYSMD4-205ENST00000450512 CHD2O14647 1828 aaKnown RBP34.32■■■■□ 3.09
LYSMD4-205ENST00000450512 ADAMTS13Q76LX8 1427 aa34.32■■■■□ 3.08
LYSMD4-205ENST00000450512 TRIM52Q96A61 297 aa34.3■■■■□ 3.08
LYSMD4-205ENST00000450512 MED1Q15648 1581 aaPredicted RBP34.3■■■■□ 3.08
LYSMD4-205ENST00000450512 DIP2AQ14689 1571 aa34.28■■■■□ 3.08
LYSMD4-205ENST00000450512 ZNF326Q5BKZ1 582 aaKnown RBP34.28■■■■□ 3.08
LYSMD4-205ENST00000450512 FAM135BQ49AJ0 1406 aa34.28■■■■□ 3.08
LYSMD4-205ENST00000450512 MSH6P52701 1360 aa34.27■■■■□ 3.08
LYSMD4-205ENST00000450512 TRPM2O94759 1503 aa34.25■■■■□ 3.07
LYSMD4-205ENST00000450512 PIK3R4Q99570 1358 aa34.24■■■■□ 3.07
LYSMD4-205ENST00000450512 CLTCL1P53675 1640 aa34.22■■■■□ 3.07
LYSMD4-205ENST00000450512 SOCS7O14512 581 aa34.22■■■■□ 3.07
LYSMD4-205ENST00000450512 SLC4A1APQ9BWU0 796 aaKnown RBP34.19■■■■□ 3.06
LYSMD4-205ENST00000450512 NCOA3Q9Y6Q9 1424 aa34.18■■■■□ 3.06
LYSMD4-205ENST00000450512 SLAIN2Q9P270 581 aa34.17■■■■□ 3.06
LYSMD4-205ENST00000450512 ROBO1Q9Y6N7 1651 aa34.16■■■■□ 3.06
LYSMD4-205ENST00000450512 C14orf37Q86TY3 774 aa34.16■■■■□ 3.06
LYSMD4-205ENST00000450512 AMOTL2Q9Y2J4 779 aa34.16■■■■□ 3.06
LYSMD4-205ENST00000450512 SETBP1Q9Y6X0 1596 aa34.15■■■■□ 3.06
LYSMD4-205ENST00000450512 PTPRUQ92729 1446 aa34.13■■■■□ 3.05
LYSMD4-205ENST00000450512 NRXN3Q9Y4C0 1643 aa34.13■■■■□ 3.05
LYSMD4-205ENST00000450512 KIF1BO60333 1816 aa34.12■■■■□ 3.05
LYSMD4-205ENST00000450512 PHF23Q9BUL5 403 aaPredicted RBP34.12■■■■□ 3.05
LYSMD4-205ENST00000450512 NEXMIFQ5QGS0 1516 aa34.12■■■■□ 3.05
LYSMD4-205ENST00000450512 C19orf44Q9H6X5 657 aa34.08■■■■□ 3.05
LYSMD4-205ENST00000450512 CADPS2Q86UW7 1296 aa34.05■■■■□ 3.04
LYSMD4-205ENST00000450512 METP08581 1390 aa34.05■■■■□ 3.04
LYSMD4-205ENST00000450512 ATF3P18847 181 aa34.04■■■■□ 3.04
LYSMD4-205ENST00000450512 SIPA1L2Q9P2F8 1722 aaPredicted RBP34.03■■■■□ 3.04
LYSMD4-205ENST00000450512 XRN1Q8IZH2 1706 aaKnown RBP34.02■■■■□ 3.04
LYSMD4-205ENST00000450512 FOXD1Q16676 465 aa34.02■■■■□ 3.04
LYSMD4-205ENST00000450512 VGFO15240 615 aaPredicted RBP34.01■■■■□ 3.03
LYSMD4-205ENST00000450512 RPGRIP1LQ68CZ1 1315 aa33.99■■■■□ 3.03
LYSMD4-205ENST00000450512 MPHOSPH9Q99550 1183 aa33.96■■■■□ 3.03
LYSMD4-205ENST00000450512 PHLPP1O60346 1717 aa33.96■■■■□ 3.03
LYSMD4-205ENST00000450512 DCCP43146 1447 aa33.91■■■■□ 3.02
LYSMD4-205ENST00000450512 CCDC144AA2RUR9 1427 aa33.9■■■■□ 3.02
LYSMD4-205ENST00000450512 JCADQ9P266 1359 aa33.87■■■■□ 3.01
LYSMD4-205ENST00000450512 ACIN1Q9UKV3 1341 aaKnown RBP33.87■■■■□ 3.01
LYSMD4-205ENST00000450512 PPLO60437 1756 aa33.87■■■■□ 3.01
LYSMD4-205ENST00000450512 SETD5Q9C0A6 1442 aa33.87■■■■□ 3.01
LYSMD4-205ENST00000450512 RGS17Q9UGC6 210 aaPredicted RBP33.86■■■■□ 3.01
LYSMD4-205ENST00000450512 COL16A1Q07092 1604 aaPredicted RBP33.86■■■■□ 3.01
LYSMD4-205ENST00000450512 BRINP3Q76B58 766 aa33.84■■■■□ 3.01
LYSMD4-205ENST00000450512 SETD1AO15047 1707 aaKnown RBP33.84■■■■□ 3.01
LYSMD4-205ENST00000450512 RGL3Q3MIN7 710 aa33.83■■■■□ 3.01
LYSMD4-205ENST00000450512 ADGRL3Q9HAR2 1447 aa33.83■■■■□ 3.01
LYSMD4-205ENST00000450512 AHDC1Q5TGY3 1603 aaPredicted RBP33.82■■■■□ 3.01
LYSMD4-205ENST00000450512 MST1RQ04912 1400 aa33.81■■■■□ 3
LYSMD4-205ENST00000450512 PTCH1Q13635 1447 aa33.79■■■■□ 3
LYSMD4-205ENST00000450512 SPATA31E1Q6ZUB1 1445 aa33.79■■■■□ 3
LYSMD4-205ENST00000450512 ROBO2Q9HCK4 1378 aa33.77■■■■□ 3
LYSMD4-205ENST00000450512 NALCNQ8IZF0 1738 aa33.77■■■■□ 3
LYSMD4-205ENST00000450512 ADGRF5Q8IZF2 1346 aa33.77■■■■□ 3
LYSMD4-205ENST00000450512 ASXL1Q8IXJ9 1541 aa33.75■■■□□ 2.99
LYSMD4-205ENST00000450512 ANKRD30BQ9BXX2 1392 aa33.74■■■□□ 2.99
LYSMD4-205ENST00000450512 RAB3GAP2Q9H2M9 1393 aa33.73■■■□□ 2.99
LYSMD4-205ENST00000450512 PRAG1Q86YV5 1406 aa33.73■■■□□ 2.99
LYSMD4-205ENST00000450512 SPATA31A6Q5VVP1 1343 aa33.72■■■□□ 2.99
LYSMD4-205ENST00000450512 POTEAQ6S8J7 498 aa33.69■■■□□ 2.98
LYSMD4-205ENST00000450512 IFT172Q9UG01 1749 aa33.68■■■□□ 2.98
LYSMD4-205ENST00000450512 SHPRHQ149N8 1683 aa33.67■■■□□ 2.98
LYSMD4-205ENST00000450512 C1orf167Q5SNV9 1468 aa33.65■■■□□ 2.98
LYSMD4-205ENST00000450512 LRP6O75581 1613 aa33.64■■■□□ 2.98
LYSMD4-205ENST00000450512 NHSL1Q5SYE7 1610 aa33.64■■■□□ 2.98
LYSMD4-205ENST00000450512 MEX3CQ5U5Q3 659 aaKnown RBP33.62■■■□□ 2.97
LYSMD4-205ENST00000450512 DDX17Q92841 729 aaKnown RBP33.62■■■□□ 2.97
LYSMD4-205ENST00000450512 STK26Q9P289 416 aa33.62■■■□□ 2.97
LYSMD4-205ENST00000450512 PIK3C2GO75747 1445 aa33.62■■■□□ 2.97
LYSMD4-205ENST00000450512 LRRC59Q96AG4 307 aaKnown RBP33.61■■■□□ 2.97
LYSMD4-205ENST00000450512 TMEM132EQ6IEE7 984 aa33.59■■■□□ 2.97
LYSMD4-205ENST00000450512 LRPPRCP42704 1394 aaKnown RBP33.58■■■□□ 2.97
LYSMD4-205ENST00000450512 ORAI2Q96SN7 254 aa33.57■■■□□ 2.96
LYSMD4-205ENST00000450512 TECPR2O15040 1411 aa33.56■■■□□ 2.96
LYSMD4-205ENST00000450512 NUTM2BA6NNL0 878 aaPredicted RBP33.56■■■□□ 2.96
LYSMD4-205ENST00000450512 NUTM2EB1AL46 878 aaPredicted RBP33.56■■■□□ 2.96
LYSMD4-205ENST00000450512 NUTM2AQ8IVF1 878 aaPredicted RBP33.56■■■□□ 2.96
LYSMD4-205ENST00000450512 WAPLQ7Z5K2 1190 aa33.54■■■□□ 2.96
LYSMD4-205ENST00000450512 ABCC11Q96J66 1382 aa33.54■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms