RNA–Protein interactions for RNA: ENST00000450162.6

SNRNP27-203, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 2

Gene SNRNP27, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-203ENST00000450162 NEURL4Q96JN8 1562 aa19.27■□□□□ 0.68
SNRNP27-203ENST00000450162 ZFYVE9O95405 1425 aa19.25■□□□□ 0.67
SNRNP27-203ENST00000450162 RIMS2Q9UQ26 1411 aa19.25■□□□□ 0.67
SNRNP27-203ENST00000450162 CCDC144AA2RUR9 1427 aa19.24■□□□□ 0.67
SNRNP27-203ENST00000450162 PPP1R15AO75807 674 aaPredicted RBP19.23■□□□□ 0.67
SNRNP27-203ENST00000450162 IQGAP1P46940 1657 aa19.22■□□□□ 0.67
SNRNP27-203ENST00000450162 ZNF326Q5BKZ1 582 aaKnown RBP19.22■□□□□ 0.67
SNRNP27-203ENST00000450162 RPGRIP1LQ68CZ1 1315 aa19.22■□□□□ 0.67
SNRNP27-203ENST00000450162 CLTCL1P53675 1640 aa19.21■□□□□ 0.67
SNRNP27-203ENST00000450162 PLEKHG1Q9ULL1 1385 aa19.2■□□□□ 0.66
SNRNP27-203ENST00000450162 CERKQ8TCT0 537 aa19.2■□□□□ 0.66
SNRNP27-203ENST00000450162 ZNF335Q9H4Z2 1342 aaPredicted RBP19.19■□□□□ 0.66
SNRNP27-203ENST00000450162 BCANQ96GW7 911 aa19.18■□□□□ 0.66
SNRNP27-203ENST00000450162 KIF1BO60333 1816 aa19.17■□□□□ 0.66
SNRNP27-203ENST00000450162 MYO5BQ9ULV0 1848 aa19.17■□□□□ 0.66
SNRNP27-203ENST00000450162 VGFO15240 615 aaPredicted RBP19.17■□□□□ 0.66
SNRNP27-203ENST00000450162 LTBP4Q8N2S1 1624 aa19.16■□□□□ 0.66
SNRNP27-203ENST00000450162 TBX22Q9Y458 520 aa19.16■□□□□ 0.66
SNRNP27-203ENST00000450162 ANKRD30BQ9BXX2 1392 aa19.16■□□□□ 0.66
SNRNP27-203ENST00000450162 CPS1P31327 1500 aa19.14■□□□□ 0.65
SNRNP27-203ENST00000450162 SLC26A8Q96RN1 970 aa19.13■□□□□ 0.65
SNRNP27-203ENST00000450162 IQSEC2Q5JU85 1478 aa19.13■□□□□ 0.65
SNRNP27-203ENST00000450162 SPATA31E1Q6ZUB1 1445 aa19.12■□□□□ 0.65
SNRNP27-203ENST00000450162 NUTM2DQ5VT03 806 aaPredicted RBP19.12■□□□□ 0.65
SNRNP27-203ENST00000450162 KCNA6P17658 529 aa19.11■□□□□ 0.65
SNRNP27-203ENST00000450162 PIK3R4Q99570 1358 aa19.1■□□□□ 0.65
SNRNP27-203ENST00000450162 NEXMIFQ5QGS0 1516 aa19.1■□□□□ 0.65
SNRNP27-203ENST00000450162 RGL3Q3MIN7 710 aa19.09■□□□□ 0.65
SNRNP27-203ENST00000450162 DIP2AQ14689 1571 aa19.08■□□□□ 0.65
SNRNP27-203ENST00000450162 FBXO41Q8TF61 875 aa19.08■□□□□ 0.64
SNRNP27-203ENST00000450162 STAC3Q96MF2 364 aa19.08■□□□□ 0.64
SNRNP27-203ENST00000450162 ADAMTS13Q76LX8 1427 aa19.08■□□□□ 0.64
SNRNP27-203ENST00000450162 SETBP1Q9Y6X0 1596 aa19.06■□□□□ 0.64
SNRNP27-203ENST00000450162 NKTRP30414 1462 aaKnown RBP19.01■□□□□ 0.63
SNRNP27-203ENST00000450162 PPLO60437 1756 aa19.01■□□□□ 0.63
SNRNP27-203ENST00000450162 LRRC7Q96NW7 1537 aa19■□□□□ 0.63
SNRNP27-203ENST00000450162 PROSER2Q86WR7 435 aaPredicted RBP19■□□□□ 0.63
SNRNP27-203ENST00000450162 NWD1Q149M9 1564 aa18.99■□□□□ 0.63
SNRNP27-203ENST00000450162 ADGRF5Q8IZF2 1346 aa18.99■□□□□ 0.63
SNRNP27-203ENST00000450162 DHX57Q6P158 1386 aaKnown RBP18.98■□□□□ 0.63
SNRNP27-203ENST00000450162 AMOTL2Q9Y2J4 779 aa18.98■□□□□ 0.63
SNRNP27-203ENST00000450162 NRXN3Q9Y4C0 1643 aa18.98■□□□□ 0.63
SNRNP27-203ENST00000450162 STRCP1A6NGW2 1772 aa18.97■□□□□ 0.63
SNRNP27-203ENST00000450162 TOM1O60784 492 aa18.97■□□□□ 0.63
SNRNP27-203ENST00000450162 NCOA3Q9Y6Q9 1424 aa18.97■□□□□ 0.63
SNRNP27-203ENST00000450162 CHD2O14647 1828 aaKnown RBP18.97■□□□□ 0.63
SNRNP27-203ENST00000450162 MYOM2P54296 1465 aa18.97■□□□□ 0.63
SNRNP27-203ENST00000450162 METP08581 1390 aa18.95■□□□□ 0.62
SNRNP27-203ENST00000450162 ILDR1Q86SU0 546 aaPredicted RBP18.95■□□□□ 0.62
SNRNP27-203ENST00000450162 DCAF11Q8TEB1 546 aa18.95■□□□□ 0.62
SNRNP27-203ENST00000450162 PCGF6Q9BYE7 350 aa18.95■□□□□ 0.62
SNRNP27-203ENST00000450162 TMEM94Q12767 1356 aa18.94■□□□□ 0.62
SNRNP27-203ENST00000450162 IFT172Q9UG01 1749 aa18.94■□□□□ 0.62
SNRNP27-203ENST00000450162 PIK3C2GO75747 1445 aa18.94■□□□□ 0.62
SNRNP27-203ENST00000450162 ALKQ9UM73 1620 aa18.94■□□□□ 0.62
SNRNP27-203ENST00000450162 UBAP1LF5GYI3 381 aa18.94■□□□□ 0.62
SNRNP27-203ENST00000450162 NRXN1Q9ULB1 1477 aa18.94■□□□□ 0.62
SNRNP27-203ENST00000450162 C14orf93Q9H972 538 aaKnown RBP18.93■□□□□ 0.62
SNRNP27-203ENST00000450162 PTPRUQ92729 1446 aa18.92■□□□□ 0.62
SNRNP27-203ENST00000450162 KDM2AQ9Y2K7 1162 aa18.9■□□□□ 0.62
SNRNP27-203ENST00000450162 PRAG1Q86YV5 1406 aa18.9■□□□□ 0.62
SNRNP27-203ENST00000450162 MSH6P52701 1360 aa18.89■□□□□ 0.61
SNRNP27-203ENST00000450162 C19orf44Q9H6X5 657 aa18.88■□□□□ 0.61
SNRNP27-203ENST00000450162 C14orf37Q86TY3 774 aa18.87■□□□□ 0.61
SNRNP27-203ENST00000450162 XRN1Q8IZH2 1706 aaKnown RBP18.87■□□□□ 0.61
SNRNP27-203ENST00000450162 SETD1AO15047 1707 aaKnown RBP18.86■□□□□ 0.61
SNRNP27-203ENST00000450162 PTCH1Q13635 1447 aa18.86■□□□□ 0.61
SNRNP27-203ENST00000450162 ABCC11Q96J66 1382 aa18.86■□□□□ 0.61
SNRNP27-203ENST00000450162 CFAP70Q5T0N1 1121 aa18.86■□□□□ 0.61
SNRNP27-203ENST00000450162 SIN3AQ96ST3 1273 aa18.86■□□□□ 0.61
SNRNP27-203ENST00000450162 LRPPRCP42704 1394 aaKnown RBP18.85■□□□□ 0.61
SNRNP27-203ENST00000450162 NEUROD1Q13562 356 aa18.85■□□□□ 0.61
SNRNP27-203ENST00000450162 SIRT1Q96EB6 747 aa18.85■□□□□ 0.61
SNRNP27-203ENST00000450162 LAMC1P11047 1609 aa18.85■□□□□ 0.61
SNRNP27-203ENST00000450162 CADPS2Q86UW7 1296 aa18.84■□□□□ 0.61
SNRNP27-203ENST00000450162 RBM33Q96EV2 1170 aaKnown RBP18.84■□□□□ 0.61
SNRNP27-203ENST00000450162 XIRP1Q702N8 1843 aaKnown RBP18.84■□□□□ 0.61
SNRNP27-203ENST00000450162 TECPR2O15040 1411 aa18.83■□□□□ 0.61
SNRNP27-203ENST00000450162 CLSPNQ9HAW4 1339 aa18.83■□□□□ 0.61
SNRNP27-203ENST00000450162 TMEM132EQ6IEE7 984 aa18.83■□□□□ 0.6
SNRNP27-203ENST00000450162 L3MBTL2Q969R5 705 aa18.83■□□□□ 0.6
SNRNP27-203ENST00000450162 ATF3P18847 181 aa18.82■□□□□ 0.6
SNRNP27-203ENST00000450162 YTHDC2Q9H6S0 1430 aaKnown RBP18.82■□□□□ 0.6
SNRNP27-203ENST00000450162 PIP4K2BP78356 416 aa18.81■□□□□ 0.6
SNRNP27-203ENST00000450162 DCCP43146 1447 aa18.81■□□□□ 0.6
SNRNP27-203ENST00000450162 ROBO2Q9HCK4 1378 aa18.81■□□□□ 0.6
SNRNP27-203ENST00000450162 STK26Q9P289 416 aa18.8■□□□□ 0.6
SNRNP27-203ENST00000450162 SCAF1Q9H7N4 1312 aaKnown RBP18.79■□□□□ 0.6
SNRNP27-203ENST00000450162 SLAIN2Q9P270 581 aa18.79■□□□□ 0.6
SNRNP27-203ENST00000450162 FAM135BQ49AJ0 1406 aa18.78■□□□□ 0.6
SNRNP27-203ENST00000450162 ADGRL3Q9HAR2 1447 aa18.78■□□□□ 0.6
SNRNP27-203ENST00000450162 ASXL1Q8IXJ9 1541 aa18.77■□□□□ 0.6
SNRNP27-203ENST00000450162 TONSLQ96HA7 1378 aa18.76■□□□□ 0.59
SNRNP27-203ENST00000450162 ADGRB1O14514 1584 aa18.75■□□□□ 0.59
SNRNP27-203ENST00000450162 TIMELESSQ9UNS1 1208 aa18.74■□□□□ 0.59
SNRNP27-203ENST00000450162 KNDC1Q76NI1 1749 aa18.74■□□□□ 0.59
SNRNP27-203ENST00000450162 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.73■□□□□ 0.59
SNRNP27-203ENST00000450162 DLC1Q96QB1 1528 aa18.73■□□□□ 0.59
SNRNP27-203ENST00000450162 KIAA1210Q9ULL0 1709 aa18.72■□□□□ 0.59
SNRNP27-203ENST00000450162 WAPLQ7Z5K2 1190 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms