RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 TMEM2Q9UHN6 1383 aa14.36□□□□□ -0.11
CCDC171-203ENST00000449575 NEURL4Q96JN8 1562 aa14.36□□□□□ -0.11
CCDC171-203ENST00000449575 SLIT1O75093 1534 aa14.36□□□□□ -0.11
CCDC171-203ENST00000449575 ARHGAP23Q9P227 1491 aa14.35□□□□□ -0.11
CCDC171-203ENST00000449575 ZNF326Q5BKZ1 582 aaKnown RBP14.34□□□□□ -0.11
CCDC171-203ENST00000449575 PPLO60437 1756 aa14.34□□□□□ -0.11
CCDC171-203ENST00000449575 ZFYVE9O95405 1425 aa14.34□□□□□ -0.11
CCDC171-203ENST00000449575 IFT172Q9UG01 1749 aa14.34□□□□□ -0.11
CCDC171-203ENST00000449575 NEXMIFQ5QGS0 1516 aa14.33□□□□□ -0.11
CCDC171-203ENST00000449575 NEUROD1Q13562 356 aa14.33□□□□□ -0.12
CCDC171-203ENST00000449575 RIMS2Q9UQ26 1411 aa14.33□□□□□ -0.12
CCDC171-203ENST00000449575 TXNDC2Q86VQ3 553 aa14.32□□□□□ -0.12
CCDC171-203ENST00000449575 SCAF11Q99590 1463 aaKnown RBP14.31□□□□□ -0.12
CCDC171-203ENST00000449575 ANKLE2Q86XL3 938 aa14.3□□□□□ -0.12
CCDC171-203ENST00000449575 IQGAP1P46940 1657 aa14.3□□□□□ -0.12
CCDC171-203ENST00000449575 CCER1Q8TC90 406 aaPredicted RBP14.29□□□□□ -0.12
CCDC171-203ENST00000449575 NRXN3Q9Y4C0 1643 aa14.27□□□□□ -0.12
CCDC171-203ENST00000449575 EID1Q9Y6B2 187 aa14.27□□□□□ -0.13
CCDC171-203ENST00000449575 NPHP4O75161 1426 aaPredicted RBP14.27□□□□□ -0.13
CCDC171-203ENST00000449575 MED14O60244 1454 aa14.27□□□□□ -0.13
CCDC171-203ENST00000449575 ADGRF5Q8IZF2 1346 aa14.26□□□□□ -0.13
CCDC171-203ENST00000449575 PPP1R15AO75807 674 aaPredicted RBP14.26□□□□□ -0.13
CCDC171-203ENST00000449575 KDM2AQ9Y2K7 1162 aa14.26□□□□□ -0.13
CCDC171-203ENST00000449575 SLC26A8Q96RN1 970 aa14.25□□□□□ -0.13
CCDC171-203ENST00000449575 DCAF11Q8TEB1 546 aa14.25□□□□□ -0.13
CCDC171-203ENST00000449575 L3MBTL2Q969R5 705 aa14.24□□□□□ -0.13
CCDC171-203ENST00000449575 PLEKHG1Q9ULL1 1385 aa14.23□□□□□ -0.13
CCDC171-203ENST00000449575 STRCP1A6NGW2 1772 aa14.23□□□□□ -0.13
CCDC171-203ENST00000449575 SETD1AO15047 1707 aaKnown RBP14.23□□□□□ -0.13
CCDC171-203ENST00000449575 RPGRIP1LQ68CZ1 1315 aa14.23□□□□□ -0.13
CCDC171-203ENST00000449575 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.23□□□□□ -0.13
CCDC171-203ENST00000449575 BCANQ96GW7 911 aa14.23□□□□□ -0.13
CCDC171-203ENST00000449575 ADAMTS13Q76LX8 1427 aa14.22□□□□□ -0.13
CCDC171-203ENST00000449575 SETBP1Q9Y6X0 1596 aa14.21□□□□□ -0.13
CCDC171-203ENST00000449575 VGFO15240 615 aaPredicted RBP14.21□□□□□ -0.14
CCDC171-203ENST00000449575 HDGFP51858 240 aaKnown RBP14.21□□□□□ -0.14
CCDC171-203ENST00000449575 MYOM2P54296 1465 aa14.2□□□□□ -0.14
CCDC171-203ENST00000449575 ALKQ9UM73 1620 aa14.19□□□□□ -0.14
CCDC171-203ENST00000449575 NRXN1Q9ULB1 1477 aa14.19□□□□□ -0.14
CCDC171-203ENST00000449575 ZNF335Q9H4Z2 1342 aaPredicted RBP14.19□□□□□ -0.14
CCDC171-203ENST00000449575 PIK3C2GO75747 1445 aa14.19□□□□□ -0.14
CCDC171-203ENST00000449575 CHD2O14647 1828 aaKnown RBP14.18□□□□□ -0.14
CCDC171-203ENST00000449575 CLSPNQ9HAW4 1339 aa14.18□□□□□ -0.14
CCDC171-203ENST00000449575 DMRT2Q9Y5R5 561 aa14.18□□□□□ -0.14
CCDC171-203ENST00000449575 METP08581 1390 aa14.17□□□□□ -0.14
CCDC171-203ENST00000449575 TONSLQ96HA7 1378 aa14.17□□□□□ -0.14
CCDC171-203ENST00000449575 ASXL1Q8IXJ9 1541 aa14.16□□□□□ -0.14
CCDC171-203ENST00000449575 CFAP70Q5T0N1 1121 aa14.16□□□□□ -0.14
CCDC171-203ENST00000449575 PTPRUQ92729 1446 aa14.15□□□□□ -0.14
CCDC171-203ENST00000449575 NBPF8Q3BBV2 869 aa14.15□□□□□ -0.14
CCDC171-203ENST00000449575 TMEM132EQ6IEE7 984 aa14.15□□□□□ -0.14
CCDC171-203ENST00000449575 PRAG1Q86YV5 1406 aa14.15□□□□□ -0.14
CCDC171-203ENST00000449575 TBX22Q9Y458 520 aa14.14□□□□□ -0.15
CCDC171-203ENST00000449575 DIP2AQ14689 1571 aa14.14□□□□□ -0.15
CCDC171-203ENST00000449575 LTBP4Q8N2S1 1624 aa14.13□□□□□ -0.15
CCDC171-203ENST00000449575 PRKCSHP14314 528 aaPredicted RBP14.13□□□□□ -0.15
CCDC171-203ENST00000449575 RBM33Q96EV2 1170 aaKnown RBP14.12□□□□□ -0.15
CCDC171-203ENST00000449575 C14orf93Q9H972 538 aaKnown RBP14.12□□□□□ -0.15
CCDC171-203ENST00000449575 XIRP1Q702N8 1843 aaKnown RBP14.12□□□□□ -0.15
CCDC171-203ENST00000449575 NBPF1Q3BBV0 1214 aa14.12□□□□□ -0.15
CCDC171-203ENST00000449575 TRPM1Q7Z4N2 1603 aa14.12□□□□□ -0.15
CCDC171-203ENST00000449575 LAMC1P11047 1609 aa14.12□□□□□ -0.15
CCDC171-203ENST00000449575 XRN1Q8IZH2 1706 aaKnown RBP14.11□□□□□ -0.15
CCDC171-203ENST00000449575 ADGRB1O14514 1584 aa14.11□□□□□ -0.15
CCDC171-203ENST00000449575 KCNA6P17658 529 aa14.11□□□□□ -0.15
CCDC171-203ENST00000449575 NWD1Q149M9 1564 aa14.1□□□□□ -0.15
CCDC171-203ENST00000449575 KIAA1210Q9ULL0 1709 aa14.1□□□□□ -0.15
CCDC171-203ENST00000449575 AMOTL2Q9Y2J4 779 aa14.1□□□□□ -0.15
CCDC171-203ENST00000449575 CENPBP07199 599 aaPredicted RBP14.09□□□□□ -0.15
CCDC171-203ENST00000449575 STK26Q9P289 416 aa14.09□□□□□ -0.15
CCDC171-203ENST00000449575 STAC3Q96MF2 364 aa14.08□□□□□ -0.16
CCDC171-203ENST00000449575 PIK3R4Q99570 1358 aa14.07□□□□□ -0.16
CCDC171-203ENST00000449575 LRRC7Q96NW7 1537 aa14.06□□□□□ -0.16
CCDC171-203ENST00000449575 YTHDC2Q9H6S0 1430 aaKnown RBP14.06□□□□□ -0.16
CCDC171-203ENST00000449575 ROBO2Q9HCK4 1378 aa14.05□□□□□ -0.16
CCDC171-203ENST00000449575 KNDC1Q76NI1 1749 aa14.05□□□□□ -0.16
CCDC171-203ENST00000449575 ARHGEF28Q8N1W1 1705 aaKnown RBP14.04□□□□□ -0.16
CCDC171-203ENST00000449575 TRAK1Q9UPV9 953 aa14.04□□□□□ -0.16
CCDC171-203ENST00000449575 CPS1P31327 1500 aa14.03□□□□□ -0.16
CCDC171-203ENST00000449575 LRPPRCP42704 1394 aaKnown RBP14.03□□□□□ -0.16
CCDC171-203ENST00000449575 PLEKHH1Q9ULM0 1364 aa14.03□□□□□ -0.16
CCDC171-203ENST00000449575 WAPLQ7Z5K2 1190 aa14.03□□□□□ -0.16
CCDC171-203ENST00000449575 PROSER2Q86WR7 435 aaPredicted RBP14.03□□□□□ -0.16
CCDC171-203ENST00000449575 TIMELESSQ9UNS1 1208 aa14.03□□□□□ -0.16
CCDC171-203ENST00000449575 NKTRP30414 1462 aaKnown RBP14.03□□□□□ -0.16
CCDC171-203ENST00000449575 TMEM94Q12767 1356 aa14.03□□□□□ -0.16
CCDC171-203ENST00000449575 NALCNQ8IZF0 1738 aa14.02□□□□□ -0.16
CCDC171-203ENST00000449575 ROCK2O75116 1388 aaKnown RBP14.02□□□□□ -0.16
CCDC171-203ENST00000449575 RALGAPBQ86X10 1494 aa14.02□□□□□ -0.17
CCDC171-203ENST00000449575 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.02□□□□□ -0.17
CCDC171-203ENST00000449575 ABCC11Q96J66 1382 aa14.01□□□□□ -0.17
CCDC171-203ENST00000449575 TECPR2O15040 1411 aa14.01□□□□□ -0.17
CCDC171-203ENST00000449575 SAFB2Q14151 953 aaKnown RBP eCLIP14.01□□□□□ -0.17
CCDC171-203ENST00000449575 CERKQ8TCT0 537 aa14□□□□□ -0.17
CCDC171-203ENST00000449575 GTF3C3Q9Y5Q9 886 aa14□□□□□ -0.17
CCDC171-203ENST00000449575 PTCH1Q13635 1447 aa14□□□□□ -0.17
CCDC171-203ENST00000449575 GPRASP1Q5JY77 1395 aa13.98□□□□□ -0.17
CCDC171-203ENST00000449575 PRAM1Q96QH2 718 aa13.98□□□□□ -0.17
CCDC171-203ENST00000449575 CARD11Q9BXL7 1154 aa13.97□□□□□ -0.17
CCDC171-203ENST00000449575 DLC1Q96QB1 1528 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms