RNA–Protein interactions for RNA: ENST00000449413.1

HLA-DRB9-201, Transcript of major histocompatibility complex, class II, DR beta 9 (pseudogene), humanhuman

BASIC

Gene HLA-DRB9, Length 343 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB9-201ENST00000449413 ERVK-7P63135 1459 aa18.39■□□□□ 0.54
HLA-DRB9-201ENST00000449413 ADGRB3O60242 1522 aa18.39■□□□□ 0.54
HLA-DRB9-201ENST00000449413 A2ML1A8K2U0 1454 aa18.38■□□□□ 0.53
HLA-DRB9-201ENST00000449413 SPATA31E1Q6ZUB1 1445 aa18.34■□□□□ 0.53
HLA-DRB9-201ENST00000449413 MYO5BQ9ULV0 1848 aa18.34■□□□□ 0.53
HLA-DRB9-201ENST00000449413 PPLO60437 1756 aa18.32■□□□□ 0.52
HLA-DRB9-201ENST00000449413 TMEM131LA2VDJ0 1609 aa18.29■□□□□ 0.52
HLA-DRB9-201ENST00000449413 KDM5AP29375 1690 aaKnown RBP18.28■□□□□ 0.52
HLA-DRB9-201ENST00000449413 TRPM1Q7Z4N2 1603 aa18.28■□□□□ 0.52
HLA-DRB9-201ENST00000449413 L3MBTL2Q969R5 705 aa18.28■□□□□ 0.52
HLA-DRB9-201ENST00000449413 ALKQ9UM73 1620 aa18.27■□□□□ 0.52
HLA-DRB9-201ENST00000449413 ANKLE2Q86XL3 938 aa18.27■□□□□ 0.52
HLA-DRB9-201ENST00000449413 TNRQ92752 1358 aa18.26■□□□□ 0.51
HLA-DRB9-201ENST00000449413 PPP1R15AO75807 674 aaPredicted RBP18.25■□□□□ 0.51
HLA-DRB9-201ENST00000449413 POLR1AO95602 1720 aaPredicted RBP18.25■□□□□ 0.51
HLA-DRB9-201ENST00000449413 MYOM2P54296 1465 aa18.25■□□□□ 0.51
HLA-DRB9-201ENST00000449413 NEXMIFQ5QGS0 1516 aa18.23■□□□□ 0.51
HLA-DRB9-201ENST00000449413 UBR1Q8IWV7 1749 aa18.23■□□□□ 0.51
HLA-DRB9-201ENST00000449413 MED14O60244 1454 aa18.23■□□□□ 0.51
HLA-DRB9-201ENST00000449413 RALGAPBQ86X10 1494 aa18.23■□□□□ 0.51
HLA-DRB9-201ENST00000449413 THEMISQ8N1K5 641 aaPredicted RBP18.23■□□□□ 0.51
HLA-DRB9-201ENST00000449413 KIAA1210Q9ULL0 1709 aa18.22■□□□□ 0.51
HLA-DRB9-201ENST00000449413 LAMC1P11047 1609 aa18.21■□□□□ 0.51
HLA-DRB9-201ENST00000449413 FBXO31Q5XUX0 539 aaPredicted RBP18.21■□□□□ 0.51
HLA-DRB9-201ENST00000449413 RGS17Q9UGC6 210 aaPredicted RBP18.21■□□□□ 0.51
HLA-DRB9-201ENST00000449413 NPHP4O75161 1426 aaPredicted RBP18.21■□□□□ 0.51
HLA-DRB9-201ENST00000449413 PRAG1Q86YV5 1406 aa18.21■□□□□ 0.51
HLA-DRB9-201ENST00000449413 NLRP1Q9C000 1473 aa18.19■□□□□ 0.5
HLA-DRB9-201ENST00000449413 SLC52A1Q9NWF4 448 aa18.18■□□□□ 0.5
HLA-DRB9-201ENST00000449413 RGL3Q3MIN7 710 aa18.17■□□□□ 0.5
HLA-DRB9-201ENST00000449413 NRXN1Q9ULB1 1477 aa18.17■□□□□ 0.5
HLA-DRB9-201ENST00000449413 LRRC7Q96NW7 1537 aa18.17■□□□□ 0.5
HLA-DRB9-201ENST00000449413 DCAF11Q8TEB1 546 aa18.15■□□□□ 0.5
HLA-DRB9-201ENST00000449413 SENP3Q9H4L4 574 aaPredicted RBP18.15■□□□□ 0.5
HLA-DRB9-201ENST00000449413 NBPF8Q3BBV2 869 aa18.14■□□□□ 0.49
HLA-DRB9-201ENST00000449413 IQGAP1P46940 1657 aa18.13■□□□□ 0.49
HLA-DRB9-201ENST00000449413 IDI1Q13907 227 aa18.13■□□□□ 0.49
HLA-DRB9-201ENST00000449413 CHGAP10645 457 aaKnown RBP18.12■□□□□ 0.49
HLA-DRB9-201ENST00000449413 ZNF326Q5BKZ1 582 aaKnown RBP18.12■□□□□ 0.49
HLA-DRB9-201ENST00000449413 PIK3C2GO75747 1445 aa18.11■□□□□ 0.49
HLA-DRB9-201ENST00000449413 KDM2AQ9Y2K7 1162 aa18.1■□□□□ 0.49
HLA-DRB9-201ENST00000449413 RPGRIP1LQ68CZ1 1315 aa18.09■□□□□ 0.49
HLA-DRB9-201ENST00000449413 STAC3Q96MF2 364 aa18.09■□□□□ 0.49
HLA-DRB9-201ENST00000449413 SETBP1Q9Y6X0 1596 aa18.08■□□□□ 0.49
HLA-DRB9-201ENST00000449413 ZFYVE9O95405 1425 aa18.08■□□□□ 0.49
HLA-DRB9-201ENST00000449413 POTEAQ6S8J7 498 aa18.08■□□□□ 0.48
HLA-DRB9-201ENST00000449413 SETD1AO15047 1707 aaKnown RBP18.08■□□□□ 0.48
HLA-DRB9-201ENST00000449413 GPRASP1Q5JY77 1395 aa18.07■□□□□ 0.48
HLA-DRB9-201ENST00000449413 STRCP1A6NGW2 1772 aa18.07■□□□□ 0.48
HLA-DRB9-201ENST00000449413 ROCK2O75116 1388 aaKnown RBP18.06■□□□□ 0.48
HLA-DRB9-201ENST00000449413 NRXN3Q9Y4C0 1643 aa18.06■□□□□ 0.48
HLA-DRB9-201ENST00000449413 RIMS2Q9UQ26 1411 aa18.06■□□□□ 0.48
HLA-DRB9-201ENST00000449413 SLIT1O75093 1534 aa18.05■□□□□ 0.48
HLA-DRB9-201ENST00000449413 FAM135BQ49AJ0 1406 aa18.05■□□□□ 0.48
HLA-DRB9-201ENST00000449413 STAG3Q9UJ98 1225 aa18.04■□□□□ 0.48
HLA-DRB9-201ENST00000449413 ASXL1Q8IXJ9 1541 aa18.03■□□□□ 0.48
HLA-DRB9-201ENST00000449413 ADGRF5Q8IZF2 1346 aa18.02■□□□□ 0.48
HLA-DRB9-201ENST00000449413 ARHGAP23Q9P227 1491 aa18.02■□□□□ 0.48
HLA-DRB9-201ENST00000449413 ADGRB1O14514 1584 aa18.02■□□□□ 0.48
HLA-DRB9-201ENST00000449413 USP47Q96K76 1375 aa18.02■□□□□ 0.47
HLA-DRB9-201ENST00000449413 ZNF316A6NFI3 1004 aaPredicted RBP18■□□□□ 0.47
HLA-DRB9-201ENST00000449413 TMEM2Q9UHN6 1383 aa18■□□□□ 0.47
HLA-DRB9-201ENST00000449413 ARHGEF28Q8N1W1 1705 aaKnown RBP18■□□□□ 0.47
HLA-DRB9-201ENST00000449413 SCAF11Q99590 1463 aaKnown RBP17.99■□□□□ 0.47
HLA-DRB9-201ENST00000449413 VGFO15240 615 aaPredicted RBP17.97■□□□□ 0.47
HLA-DRB9-201ENST00000449413 KNDC1Q76NI1 1749 aa17.96■□□□□ 0.47
HLA-DRB9-201ENST00000449413 EIF4G2P78344 907 aaKnown RBP eCLIP17.96■□□□□ 0.47
HLA-DRB9-201ENST00000449413 CARD11Q9BXL7 1154 aa17.96■□□□□ 0.47
HLA-DRB9-201ENST00000449413 DIP2AQ14689 1571 aa17.96■□□□□ 0.46
HLA-DRB9-201ENST00000449413 QRICH2Q9H0J4 1663 aa17.95■□□□□ 0.46
HLA-DRB9-201ENST00000449413 HSPA5P11021 654 aaKnown RBP17.94■□□□□ 0.46
HLA-DRB9-201ENST00000449413 LTKP29376 864 aa17.94■□□□□ 0.46
HLA-DRB9-201ENST00000449413 NBPF1Q3BBV0 1214 aa17.94■□□□□ 0.46
HLA-DRB9-201ENST00000449413 NUTM2DQ5VT03 806 aaPredicted RBP17.94■□□□□ 0.46
HLA-DRB9-201ENST00000449413 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.93■□□□□ 0.46
HLA-DRB9-201ENST00000449413 SRCAPQ6ZRS2 3230 aa17.93■□□□□ 0.46
HLA-DRB9-201ENST00000449413 TXNDC2Q86VQ3 553 aa17.92■□□□□ 0.46
HLA-DRB9-201ENST00000449413 CFAP70Q5T0N1 1121 aa17.91■□□□□ 0.46
HLA-DRB9-201ENST00000449413 EIF3AQ14152 1382 aaKnown RBP17.91■□□□□ 0.46
HLA-DRB9-201ENST00000449413 PLEKHG1Q9ULL1 1385 aa17.91■□□□□ 0.46
HLA-DRB9-201ENST00000449413 EID1Q9Y6B2 187 aa17.9■□□□□ 0.46
HLA-DRB9-201ENST00000449413 XIRP1Q702N8 1843 aaKnown RBP17.9■□□□□ 0.46
HLA-DRB9-201ENST00000449413 TMEM94Q12767 1356 aa17.9■□□□□ 0.46
HLA-DRB9-201ENST00000449413 C14orf93Q9H972 538 aaKnown RBP17.89■□□□□ 0.45
HLA-DRB9-201ENST00000449413 HIRIP3Q9BW71 556 aaPredicted RBP17.88■□□□□ 0.45
HLA-DRB9-201ENST00000449413 HDGFP51858 240 aaKnown RBP17.87■□□□□ 0.45
HLA-DRB9-201ENST00000449413 UPF1Q92900 1129 aaKnown RBP eCLIP17.87■□□□□ 0.45
HLA-DRB9-201ENST00000449413 DLC1Q96QB1 1528 aa17.87■□□□□ 0.45
HLA-DRB9-201ENST00000449413 ROBO1Q9Y6N7 1651 aa17.87■□□□□ 0.45
HLA-DRB9-201ENST00000449413 ADAMTS13Q76LX8 1427 aa17.86■□□□□ 0.45
HLA-DRB9-201ENST00000449413 KCNA6P17658 529 aa17.85■□□□□ 0.45
HLA-DRB9-201ENST00000449413 JCADQ9P266 1359 aa17.85■□□□□ 0.45
HLA-DRB9-201ENST00000449413 XRN1Q8IZH2 1706 aaKnown RBP17.84■□□□□ 0.45
HLA-DRB9-201ENST00000449413 YTHDC2Q9H6S0 1430 aaKnown RBP17.84■□□□□ 0.45
HLA-DRB9-201ENST00000449413 PROSER2Q86WR7 435 aaPredicted RBP17.82■□□□□ 0.44
HLA-DRB9-201ENST00000449413 MYOM1P52179 1685 aa17.81■□□□□ 0.44
HLA-DRB9-201ENST00000449413 ST20-MTHFSA0A0A6YYL1 179 aa17.81■□□□□ 0.44
HLA-DRB9-201ENST00000449413 CCDC7Q96M83 1385 aa17.8■□□□□ 0.44
HLA-DRB9-201ENST00000449413 SBNO2Q9Y2G9 1366 aa17.8■□□□□ 0.44
HLA-DRB9-201ENST00000449413 ZNF772Q68DY9 489 aaPredicted RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms