RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 MYOM2P54296 1465 aa20.93■□□□□ 0.94
TNF-208ENST00000449264 NUTM2DQ5VT03 806 aaPredicted RBP20.92■□□□□ 0.94
TNF-208ENST00000449264 PRAG1Q86YV5 1406 aa20.92■□□□□ 0.94
TNF-208ENST00000449264 RPGRIP1LQ68CZ1 1315 aa20.91■□□□□ 0.94
TNF-208ENST00000449264 NBPF8Q3BBV2 869 aa20.91■□□□□ 0.94
TNF-208ENST00000449264 UHRF1BP1Q6BDS2 1440 aa20.91■□□□□ 0.94
TNF-208ENST00000449264 RIMS2Q9UQ26 1411 aa20.9■□□□□ 0.94
TNF-208ENST00000449264 ADGRF5Q8IZF2 1346 aa20.88■□□□□ 0.93
TNF-208ENST00000449264 TRPM1Q7Z4N2 1603 aa20.87■□□□□ 0.93
TNF-208ENST00000449264 TMEM2Q9UHN6 1383 aa20.86■□□□□ 0.93
TNF-208ENST00000449264 ZFYVE9O95405 1425 aa20.86■□□□□ 0.93
TNF-208ENST00000449264 STAC3Q96MF2 364 aa20.86■□□□□ 0.93
TNF-208ENST00000449264 NRXN1Q9ULB1 1477 aa20.85■□□□□ 0.93
TNF-208ENST00000449264 RALGAPBQ86X10 1494 aa20.84■□□□□ 0.93
TNF-208ENST00000449264 SENP3Q9H4L4 574 aaPredicted RBP20.84■□□□□ 0.93
TNF-208ENST00000449264 VGFO15240 615 aaPredicted RBP20.83■□□□□ 0.93
TNF-208ENST00000449264 THEMISQ8N1K5 641 aaPredicted RBP20.83■□□□□ 0.93
TNF-208ENST00000449264 SLIT1O75093 1534 aa20.83■□□□□ 0.93
TNF-208ENST00000449264 PIK3C2GO75747 1445 aa20.83■□□□□ 0.92
TNF-208ENST00000449264 ARHGAP23Q9P227 1491 aa20.81■□□□□ 0.92
TNF-208ENST00000449264 KIAA1210Q9ULL0 1709 aa20.81■□□□□ 0.92
TNF-208ENST00000449264 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.8■□□□□ 0.92
TNF-208ENST00000449264 ROCK2O75116 1388 aaKnown RBP20.8■□□□□ 0.92
TNF-208ENST00000449264 HDGFP51858 240 aaKnown RBP20.79■□□□□ 0.92
TNF-208ENST00000449264 LAMC1P11047 1609 aa20.78■□□□□ 0.92
TNF-208ENST00000449264 IQGAP1P46940 1657 aa20.78■□□□□ 0.92
TNF-208ENST00000449264 EID1Q9Y6B2 187 aa20.78■□□□□ 0.92
TNF-208ENST00000449264 SCAF11Q99590 1463 aaKnown RBP20.77■□□□□ 0.91
TNF-208ENST00000449264 LTKP29376 864 aa20.77■□□□□ 0.91
TNF-208ENST00000449264 CFAP70Q5T0N1 1121 aa20.77■□□□□ 0.91
TNF-208ENST00000449264 TXNDC2Q86VQ3 553 aa20.77■□□□□ 0.91
TNF-208ENST00000449264 NBPF1Q3BBV0 1214 aa20.76■□□□□ 0.91
TNF-208ENST00000449264 NRXN3Q9Y4C0 1643 aa20.75■□□□□ 0.91
TNF-208ENST00000449264 POLR1AO95602 1720 aaPredicted RBP20.75■□□□□ 0.91
TNF-208ENST00000449264 BCANQ96GW7 911 aa20.74■□□□□ 0.91
TNF-208ENST00000449264 CARD11Q9BXL7 1154 aa20.74■□□□□ 0.91
TNF-208ENST00000449264 SETBP1Q9Y6X0 1596 aa20.74■□□□□ 0.91
TNF-208ENST00000449264 LMTK3Q96Q04 1460 aa20.73■□□□□ 0.91
TNF-208ENST00000449264 ALKQ9UM73 1620 aa20.73■□□□□ 0.91
TNF-208ENST00000449264 SETD1AO15047 1707 aaKnown RBP20.72■□□□□ 0.91
TNF-208ENST00000449264 GPRASP1Q5JY77 1395 aa20.72■□□□□ 0.91
TNF-208ENST00000449264 PLEKHG1Q9ULL1 1385 aa20.72■□□□□ 0.91
TNF-208ENST00000449264 C14orf93Q9H972 538 aaKnown RBP20.71■□□□□ 0.91
TNF-208ENST00000449264 ANKLE2Q86XL3 938 aa20.7■□□□□ 0.91
TNF-208ENST00000449264 ASXL1Q8IXJ9 1541 aa20.7■□□□□ 0.9
TNF-208ENST00000449264 ADGRB1O14514 1584 aa20.69■□□□□ 0.9
TNF-208ENST00000449264 HSPA2P54652 639 aa20.69■□□□□ 0.9
TNF-208ENST00000449264 USP47Q96K76 1375 aa20.69■□□□□ 0.9
TNF-208ENST00000449264 TMEM132EQ6IEE7 984 aa20.67■□□□□ 0.9
TNF-208ENST00000449264 HIRIP3Q9BW71 556 aaPredicted RBP20.67■□□□□ 0.9
TNF-208ENST00000449264 EIF4G2P78344 907 aaKnown RBP eCLIP20.66■□□□□ 0.9
TNF-208ENST00000449264 ADAMTS13Q76LX8 1427 aa20.66■□□□□ 0.9
TNF-208ENST00000449264 HSPA5P11021 654 aaKnown RBP20.64■□□□□ 0.9
TNF-208ENST00000449264 NCKAP5LQ9HCH0 1330 aa20.64■□□□□ 0.89
TNF-208ENST00000449264 DIP2AQ14689 1571 aa20.64■□□□□ 0.89
TNF-208ENST00000449264 SLC26A8Q96RN1 970 aa20.64■□□□□ 0.89
TNF-208ENST00000449264 NPHP4O75161 1426 aaPredicted RBP20.62■□□□□ 0.89
TNF-208ENST00000449264 METP08581 1390 aa20.61■□□□□ 0.89
TNF-208ENST00000449264 MED14O60244 1454 aa20.61■□□□□ 0.89
TNF-208ENST00000449264 ARHGEF28Q8N1W1 1705 aaKnown RBP20.6■□□□□ 0.89
TNF-208ENST00000449264 YTHDC2Q9H6S0 1430 aaKnown RBP20.6■□□□□ 0.89
TNF-208ENST00000449264 STK26Q9P289 416 aa20.6■□□□□ 0.89
TNF-208ENST00000449264 EIF3AQ14152 1382 aaKnown RBP20.6■□□□□ 0.89
TNF-208ENST00000449264 TRAK1Q9UPV9 953 aa20.59■□□□□ 0.89
TNF-208ENST00000449264 STRCQ7RTU9 1775 aa20.58■□□□□ 0.89
TNF-208ENST00000449264 ZNF316A6NFI3 1004 aaPredicted RBP20.58■□□□□ 0.88
TNF-208ENST00000449264 ST20-MTHFSA0A0A6YYL1 179 aa20.57■□□□□ 0.88
TNF-208ENST00000449264 KNDC1Q76NI1 1749 aa20.56■□□□□ 0.88
TNF-208ENST00000449264 LRPPRCP42704 1394 aaKnown RBP20.55■□□□□ 0.88
TNF-208ENST00000449264 TBX22Q9Y458 520 aa20.55■□□□□ 0.88
TNF-208ENST00000449264 QRICH2Q9H0J4 1663 aa20.55■□□□□ 0.88
TNF-208ENST00000449264 PTPRUQ92729 1446 aa20.52■□□□□ 0.88
TNF-208ENST00000449264 CPS1P31327 1500 aa20.51■□□□□ 0.87
TNF-208ENST00000449264 DLC1Q96QB1 1528 aa20.51■□□□□ 0.87
TNF-208ENST00000449264 CHD2O14647 1828 aaKnown RBP20.51■□□□□ 0.87
TNF-208ENST00000449264 CENPJQ9HC77 1338 aaPredicted RBP20.51■□□□□ 0.87
TNF-208ENST00000449264 XRN1Q8IZH2 1706 aaKnown RBP20.51■□□□□ 0.87
TNF-208ENST00000449264 ABCC11Q96J66 1382 aa20.5■□□□□ 0.87
TNF-208ENST00000449264 TECPR2O15040 1411 aa20.49■□□□□ 0.87
TNF-208ENST00000449264 PIK3R4Q99570 1358 aa20.49■□□□□ 0.87
TNF-208ENST00000449264 SAFB2Q14151 953 aaKnown RBP eCLIP20.48■□□□□ 0.87
TNF-208ENST00000449264 PRAM1Q96QH2 718 aa20.48■□□□□ 0.87
TNF-208ENST00000449264 POGKQ9P215 609 aa20.48■□□□□ 0.87
TNF-208ENST00000449264 AMOTL2Q9Y2J4 779 aa20.48■□□□□ 0.87
TNF-208ENST00000449264 TESK2Q96S53 571 aa20.46■□□□□ 0.87
TNF-208ENST00000449264 ROBO2Q9HCK4 1378 aa20.46■□□□□ 0.87
TNF-208ENST00000449264 PLEKHH1Q9ULM0 1364 aa20.46■□□□□ 0.87
TNF-208ENST00000449264 PTCH1Q13635 1447 aa20.45■□□□□ 0.86
TNF-208ENST00000449264 WAPLQ7Z5K2 1190 aa20.45■□□□□ 0.86
TNF-208ENST00000449264 NWD1Q149M9 1564 aa20.44■□□□□ 0.86
TNF-208ENST00000449264 DISP3Q9P2K9 1392 aa20.43■□□□□ 0.86
TNF-208ENST00000449264 FAM135BQ49AJ0 1406 aa20.43■□□□□ 0.86
TNF-208ENST00000449264 C11orf95C9JLR9 678 aaPredicted RBP20.43■□□□□ 0.86
TNF-208ENST00000449264 KCNA6P17658 529 aa20.43■□□□□ 0.86
TNF-208ENST00000449264 POLR3GLQ9BT43 218 aa20.42■□□□□ 0.86
TNF-208ENST00000449264 SBNO2Q9Y2G9 1366 aa20.42■□□□□ 0.86
TNF-208ENST00000449264 TMF1P82094 1093 aa20.42■□□□□ 0.86
TNF-208ENST00000449264 MINK1Q8N4C8 1332 aaPredicted RBP20.41■□□□□ 0.86
TNF-208ENST00000449264 WASHC2AQ641Q2 1341 aa20.41■□□□□ 0.86
TNF-208ENST00000449264 STRCP1A6NGW2 1772 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms