RNA–Protein interactions for RNA: ENST00000449191.1

UBE2F-SCLY-201, Transcript of UBE2F-SCLY readthrough (NMD candidate), humanhuman

APPRIS P5 TSL 3 BASIC

Gene UBE2F-SCLY, Length 951 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-SCLY-201ENST00000449191 ILDR2Q71H61 639 aa15.24■□□□□ 0.03
UBE2F-SCLY-201ENST00000449191 RIMS2Q9UQ26 1411 aa15.24■□□□□ 0.03
UBE2F-SCLY-201ENST00000449191 NUP155O75694 1391 aa15.24■□□□□ 0.03
UBE2F-SCLY-201ENST00000449191 NKTRP30414 1462 aaKnown RBP15.23■□□□□ 0.03
UBE2F-SCLY-201ENST00000449191 MED1Q15648 1581 aaPredicted RBP15.23■□□□□ 0.03
UBE2F-SCLY-201ENST00000449191 PLEKHG1Q9ULL1 1385 aa15.23■□□□□ 0.03
UBE2F-SCLY-201ENST00000449191 SLC26A8Q96RN1 970 aa15.22■□□□□ 0.03
UBE2F-SCLY-201ENST00000449191 SPHKAPQ2M3C7 1700 aa15.21■□□□□ 0.03
UBE2F-SCLY-201ENST00000449191 KCNA6P17658 529 aa15.21■□□□□ 0.03
UBE2F-SCLY-201ENST00000449191 TMEM94Q12767 1356 aa15.21■□□□□ 0.02
UBE2F-SCLY-201ENST00000449191 CHD2O14647 1828 aaKnown RBP15.2■□□□□ 0.02
UBE2F-SCLY-201ENST00000449191 PPP1R15AO75807 674 aaPredicted RBP15.19■□□□□ 0.02
UBE2F-SCLY-201ENST00000449191 HDGFP51858 240 aaKnown RBP15.19■□□□□ 0.02
UBE2F-SCLY-201ENST00000449191 BCANQ96GW7 911 aa15.19■□□□□ 0.02
UBE2F-SCLY-201ENST00000449191 DIP2AQ14689 1571 aa15.19■□□□□ 0.02
UBE2F-SCLY-201ENST00000449191 CHGAP10645 457 aaKnown RBP15.18■□□□□ 0.02
UBE2F-SCLY-201ENST00000449191 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.17■□□□□ 0.02
UBE2F-SCLY-201ENST00000449191 NAIPQ13075 1403 aa15.16■□□□□ 0.02
UBE2F-SCLY-201ENST00000449191 PROSER2Q86WR7 435 aaPredicted RBP15.15■□□□□ 0.02
UBE2F-SCLY-201ENST00000449191 SENP3Q9H4L4 574 aaPredicted RBP15.15■□□□□ 0.02
UBE2F-SCLY-201ENST00000449191 ADAMTS13Q76LX8 1427 aa15.15■□□□□ 0.02
UBE2F-SCLY-201ENST00000449191 SOCS7O14512 581 aa15.14■□□□□ 0.01
UBE2F-SCLY-201ENST00000449191 FAM135BQ49AJ0 1406 aa15.14■□□□□ 0.01
UBE2F-SCLY-201ENST00000449191 TRPM2O94759 1503 aa15.13■□□□□ 0.01
UBE2F-SCLY-201ENST00000449191 ROBO1Q9Y6N7 1651 aa15.13■□□□□ 0.01
UBE2F-SCLY-201ENST00000449191 TBX22Q9Y458 520 aa15.13■□□□□ 0.01
UBE2F-SCLY-201ENST00000449191 MSH6P52701 1360 aa15.12■□□□□ 0.01
UBE2F-SCLY-201ENST00000449191 HFM1A2PYH4 1435 aa15.12■□□□□ 0.01
UBE2F-SCLY-201ENST00000449191 NUTM2DQ5VT03 806 aaPredicted RBP15.12■□□□□ 0.01
UBE2F-SCLY-201ENST00000449191 RBM33Q96EV2 1170 aaKnown RBP15.12■□□□□ 0.01
UBE2F-SCLY-201ENST00000449191 CLTCL1P53675 1640 aa15.12■□□□□ 0.01
UBE2F-SCLY-201ENST00000449191 PIK3R4Q99570 1358 aa15.11■□□□□ 0.01
UBE2F-SCLY-201ENST00000449191 NRXN3Q9Y4C0 1643 aa15.1■□□□□ 0.01
UBE2F-SCLY-201ENST00000449191 SETBP1Q9Y6X0 1596 aa15.1■□□□□ 0.01
UBE2F-SCLY-201ENST00000449191 NCOA3Q9Y6Q9 1424 aa15.09■□□□□ 0.01
UBE2F-SCLY-201ENST00000449191 KIF1BO60333 1816 aa15.09■□□□□ 0.01
UBE2F-SCLY-201ENST00000449191 NEXMIFQ5QGS0 1516 aa15.07■□□□□ 0
UBE2F-SCLY-201ENST00000449191 XRN1Q8IZH2 1706 aaKnown RBP15.07■□□□□ 0
UBE2F-SCLY-201ENST00000449191 PHF23Q9BUL5 403 aaPredicted RBP15.07■□□□□ 0
UBE2F-SCLY-201ENST00000449191 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.06■□□□□ 0
UBE2F-SCLY-201ENST00000449191 ZNF326Q5BKZ1 582 aaKnown RBP15.05■□□□□ -0
UBE2F-SCLY-201ENST00000449191 PTPRUQ92729 1446 aa15.05■□□□□ -0
UBE2F-SCLY-201ENST00000449191 PHLPP1O60346 1717 aa15.04■□□□□ -0
UBE2F-SCLY-201ENST00000449191 TRIM52Q96A61 297 aa15.03■□□□□ -0
UBE2F-SCLY-201ENST00000449191 SLAIN2Q9P270 581 aa15.03■□□□□ -0
UBE2F-SCLY-201ENST00000449191 C14orf37Q86TY3 774 aa15.02■□□□□ -0
UBE2F-SCLY-201ENST00000449191 AMOTL2Q9Y2J4 779 aa15.02■□□□□ -0
UBE2F-SCLY-201ENST00000449191 COL16A1Q07092 1604 aaPredicted RBP15□□□□□ -0.01
UBE2F-SCLY-201ENST00000449191 CADPS2Q86UW7 1296 aa15□□□□□ -0.01
UBE2F-SCLY-201ENST00000449191 SLC4A1APQ9BWU0 796 aaKnown RBP15□□□□□ -0.01
UBE2F-SCLY-201ENST00000449191 DCCP43146 1447 aa15□□□□□ -0.01
UBE2F-SCLY-201ENST00000449191 METP08581 1390 aa14.99□□□□□ -0.01
UBE2F-SCLY-201ENST00000449191 C19orf44Q9H6X5 657 aa14.99□□□□□ -0.01
UBE2F-SCLY-201ENST00000449191 SETD1AO15047 1707 aaKnown RBP14.99□□□□□ -0.01
UBE2F-SCLY-201ENST00000449191 AHDC1Q5TGY3 1603 aaPredicted RBP14.99□□□□□ -0.01
UBE2F-SCLY-201ENST00000449191 PPLO60437 1756 aa14.98□□□□□ -0.01
UBE2F-SCLY-201ENST00000449191 ATF3P18847 181 aa14.98□□□□□ -0.01
UBE2F-SCLY-201ENST00000449191 JCADQ9P266 1359 aa14.97□□□□□ -0.01
UBE2F-SCLY-201ENST00000449191 NALCNQ8IZF0 1738 aa14.96□□□□□ -0.01
UBE2F-SCLY-201ENST00000449191 RPGRIP1LQ68CZ1 1315 aa14.94□□□□□ -0.02
UBE2F-SCLY-201ENST00000449191 ADGRL3Q9HAR2 1447 aa14.94□□□□□ -0.02
UBE2F-SCLY-201ENST00000449191 VGFO15240 615 aaPredicted RBP14.94□□□□□ -0.02
UBE2F-SCLY-201ENST00000449191 RGS17Q9UGC6 210 aaPredicted RBP14.94□□□□□ -0.02
UBE2F-SCLY-201ENST00000449191 SHPRHQ149N8 1683 aa14.93□□□□□ -0.02
UBE2F-SCLY-201ENST00000449191 MST1RQ04912 1400 aa14.93□□□□□ -0.02
UBE2F-SCLY-201ENST00000449191 PTCH1Q13635 1447 aa14.93□□□□□ -0.02
UBE2F-SCLY-201ENST00000449191 ASXL1Q8IXJ9 1541 aa14.93□□□□□ -0.02
UBE2F-SCLY-201ENST00000449191 CCDC144AA2RUR9 1427 aa14.92□□□□□ -0.02
UBE2F-SCLY-201ENST00000449191 PRAG1Q86YV5 1406 aa14.92□□□□□ -0.02
UBE2F-SCLY-201ENST00000449191 IFT172Q9UG01 1749 aa14.92□□□□□ -0.02
UBE2F-SCLY-201ENST00000449191 NHSL1Q5SYE7 1610 aa14.92□□□□□ -0.02
UBE2F-SCLY-201ENST00000449191 FOXD1Q16676 465 aa14.91□□□□□ -0.02
UBE2F-SCLY-201ENST00000449191 BRINP3Q76B58 766 aa14.91□□□□□ -0.02
UBE2F-SCLY-201ENST00000449191 MPHOSPH9Q99550 1183 aa14.89□□□□□ -0.03
UBE2F-SCLY-201ENST00000449191 SPATA31E1Q6ZUB1 1445 aa14.89□□□□□ -0.03
UBE2F-SCLY-201ENST00000449191 SPATA31A6Q5VVP1 1343 aa14.89□□□□□ -0.03
UBE2F-SCLY-201ENST00000449191 LRP6O75581 1613 aa14.88□□□□□ -0.03
UBE2F-SCLY-201ENST00000449191 ROBO2Q9HCK4 1378 aa14.88□□□□□ -0.03
UBE2F-SCLY-201ENST00000449191 ACIN1Q9UKV3 1341 aaKnown RBP14.88□□□□□ -0.03
UBE2F-SCLY-201ENST00000449191 SETD5Q9C0A6 1442 aa14.87□□□□□ -0.03
UBE2F-SCLY-201ENST00000449191 ANKRD30BQ9BXX2 1392 aa14.85□□□□□ -0.03
UBE2F-SCLY-201ENST00000449191 POTEAQ6S8J7 498 aa14.85□□□□□ -0.03
UBE2F-SCLY-201ENST00000449191 ADGRF5Q8IZF2 1346 aa14.85□□□□□ -0.03
UBE2F-SCLY-201ENST00000449191 LAMC1P11047 1609 aa14.84□□□□□ -0.03
UBE2F-SCLY-201ENST00000449191 C1orf167Q5SNV9 1468 aa14.84□□□□□ -0.03
UBE2F-SCLY-201ENST00000449191 KNDC1Q76NI1 1749 aa14.84□□□□□ -0.03
UBE2F-SCLY-201ENST00000449191 CDC42BPGQ6DT37 1551 aa14.83□□□□□ -0.04
UBE2F-SCLY-201ENST00000449191 RGL3Q3MIN7 710 aa14.83□□□□□ -0.04
UBE2F-SCLY-201ENST00000449191 PIK3C2GO75747 1445 aa14.83□□□□□ -0.04
UBE2F-SCLY-201ENST00000449191 MEX3CQ5U5Q3 659 aaKnown RBP14.82□□□□□ -0.04
UBE2F-SCLY-201ENST00000449191 RAB3GAP2Q9H2M9 1393 aa14.82□□□□□ -0.04
UBE2F-SCLY-201ENST00000449191 TECPR2O15040 1411 aa14.82□□□□□ -0.04
UBE2F-SCLY-201ENST00000449191 LRPPRCP42704 1394 aaKnown RBP14.8□□□□□ -0.04
UBE2F-SCLY-201ENST00000449191 MYOM2P54296 1465 aa14.79□□□□□ -0.04
UBE2F-SCLY-201ENST00000449191 LRRC59Q96AG4 307 aaKnown RBP14.79□□□□□ -0.04
UBE2F-SCLY-201ENST00000449191 NRXN1Q9ULB1 1477 aa14.78□□□□□ -0.04
UBE2F-SCLY-201ENST00000449191 PNPLA6Q8IY17 1366 aa14.78□□□□□ -0.04
UBE2F-SCLY-201ENST00000449191 DDX17Q92841 729 aaKnown RBP14.78□□□□□ -0.04
UBE2F-SCLY-201ENST00000449191 NUTM2BA6NNL0 878 aaPredicted RBP14.77□□□□□ -0.05
UBE2F-SCLY-201ENST00000449191 NUTM2EB1AL46 878 aaPredicted RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms