RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 RIMS2Q9UQ26 1411 aa21.05■□□□□ 0.96
SHANK2-210ENST00000449116 STAC3Q96MF2 364 aa21.05■□□□□ 0.96
SHANK2-210ENST00000449116 ZFYVE9O95405 1425 aa21.04■□□□□ 0.96
SHANK2-210ENST00000449116 SLIT1O75093 1534 aa21.04■□□□□ 0.96
SHANK2-210ENST00000449116 IFT172Q9UG01 1749 aa21.04■□□□□ 0.96
SHANK2-210ENST00000449116 ARHGAP23Q9P227 1491 aa21.04■□□□□ 0.96
SHANK2-210ENST00000449116 PPLO60437 1756 aa21.03■□□□□ 0.96
SHANK2-210ENST00000449116 MYOM2P54296 1465 aa21.03■□□□□ 0.96
SHANK2-210ENST00000449116 HDGFP51858 240 aaKnown RBP21.03■□□□□ 0.96
SHANK2-210ENST00000449116 KDM2AQ9Y2K7 1162 aa21.03■□□□□ 0.96
SHANK2-210ENST00000449116 LMTK3Q96Q04 1460 aa21.02■□□□□ 0.96
SHANK2-210ENST00000449116 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.02■□□□□ 0.96
SHANK2-210ENST00000449116 VGFO15240 615 aaPredicted RBP21.01■□□□□ 0.95
SHANK2-210ENST00000449116 PPP1R15AO75807 674 aaPredicted RBP21.01■□□□□ 0.95
SHANK2-210ENST00000449116 NUTM2DQ5VT03 806 aaPredicted RBP20.99■□□□□ 0.95
SHANK2-210ENST00000449116 ILDR1Q86SU0 546 aaPredicted RBP20.99■□□□□ 0.95
SHANK2-210ENST00000449116 EID1Q9Y6B2 187 aa20.99■□□□□ 0.95
SHANK2-210ENST00000449116 TXNDC2Q86VQ3 553 aa20.98■□□□□ 0.95
SHANK2-210ENST00000449116 NRXN1Q9ULB1 1477 aa20.98■□□□□ 0.95
SHANK2-210ENST00000449116 ADGRF5Q8IZF2 1346 aa20.98■□□□□ 0.95
SHANK2-210ENST00000449116 PRAG1Q86YV5 1406 aa20.97■□□□□ 0.95
SHANK2-210ENST00000449116 LTKP29376 864 aa20.97■□□□□ 0.95
SHANK2-210ENST00000449116 SCAF11Q99590 1463 aaKnown RBP20.95■□□□□ 0.94
SHANK2-210ENST00000449116 ANKLE2Q86XL3 938 aa20.95■□□□□ 0.94
SHANK2-210ENST00000449116 PIK3C2GO75747 1445 aa20.94■□□□□ 0.94
SHANK2-210ENST00000449116 HSPA2P54652 639 aa20.93■□□□□ 0.94
SHANK2-210ENST00000449116 NBPF8Q3BBV2 869 aa20.93■□□□□ 0.94
SHANK2-210ENST00000449116 PLEKHG1Q9ULL1 1385 aa20.92■□□□□ 0.94
SHANK2-210ENST00000449116 SETBP1Q9Y6X0 1596 aa20.89■□□□□ 0.93
SHANK2-210ENST00000449116 NCKAP5LQ9HCH0 1330 aa20.88■□□□□ 0.93
SHANK2-210ENST00000449116 POLR1AO95602 1720 aaPredicted RBP20.88■□□□□ 0.93
SHANK2-210ENST00000449116 MED14O60244 1454 aa20.88■□□□□ 0.93
SHANK2-210ENST00000449116 BCANQ96GW7 911 aa20.87■□□□□ 0.93
SHANK2-210ENST00000449116 C14orf93Q9H972 538 aaKnown RBP20.87■□□□□ 0.93
SHANK2-210ENST00000449116 RALGAPBQ86X10 1494 aa20.87■□□□□ 0.93
SHANK2-210ENST00000449116 NRXN3Q9Y4C0 1643 aa20.86■□□□□ 0.93
SHANK2-210ENST00000449116 CFAP70Q5T0N1 1121 aa20.86■□□□□ 0.93
SHANK2-210ENST00000449116 SENP3Q9H4L4 574 aaPredicted RBP20.86■□□□□ 0.93
SHANK2-210ENST00000449116 NPHP4O75161 1426 aaPredicted RBP20.86■□□□□ 0.93
SHANK2-210ENST00000449116 TRPM1Q7Z4N2 1603 aa20.86■□□□□ 0.93
SHANK2-210ENST00000449116 KIAA1210Q9ULL0 1709 aa20.85■□□□□ 0.93
SHANK2-210ENST00000449116 LAMC1P11047 1609 aa20.85■□□□□ 0.93
SHANK2-210ENST00000449116 IQGAP1P46940 1657 aa20.84■□□□□ 0.93
SHANK2-210ENST00000449116 ALKQ9UM73 1620 aa20.84■□□□□ 0.93
SHANK2-210ENST00000449116 ADAMTS13Q76LX8 1427 aa20.84■□□□□ 0.93
SHANK2-210ENST00000449116 ROCK2O75116 1388 aaKnown RBP20.83■□□□□ 0.92
SHANK2-210ENST00000449116 DIP2AQ14689 1571 aa20.81■□□□□ 0.92
SHANK2-210ENST00000449116 NBPF1Q3BBV0 1214 aa20.81■□□□□ 0.92
SHANK2-210ENST00000449116 SLC26A8Q96RN1 970 aa20.8■□□□□ 0.92
SHANK2-210ENST00000449116 TBX22Q9Y458 520 aa20.8■□□□□ 0.92
SHANK2-210ENST00000449116 GPRASP1Q5JY77 1395 aa20.8■□□□□ 0.92
SHANK2-210ENST00000449116 STRCQ7RTU9 1775 aa20.8■□□□□ 0.92
SHANK2-210ENST00000449116 SETD1AO15047 1707 aaKnown RBP20.79■□□□□ 0.92
SHANK2-210ENST00000449116 ADGRB1O14514 1584 aa20.78■□□□□ 0.92
SHANK2-210ENST00000449116 ASXL1Q8IXJ9 1541 aa20.78■□□□□ 0.92
SHANK2-210ENST00000449116 CARD11Q9BXL7 1154 aa20.77■□□□□ 0.92
SHANK2-210ENST00000449116 TMEM132EQ6IEE7 984 aa20.76■□□□□ 0.91
SHANK2-210ENST00000449116 METP08581 1390 aa20.75■□□□□ 0.91
SHANK2-210ENST00000449116 PIK3R4Q99570 1358 aa20.74■□□□□ 0.91
SHANK2-210ENST00000449116 DMRT2Q9Y5R5 561 aa20.73■□□□□ 0.91
SHANK2-210ENST00000449116 YTHDC2Q9H6S0 1430 aaKnown RBP20.72■□□□□ 0.91
SHANK2-210ENST00000449116 LRPPRCP42704 1394 aaKnown RBP20.72■□□□□ 0.91
SHANK2-210ENST00000449116 USP47Q96K76 1375 aa20.69■□□□□ 0.9
SHANK2-210ENST00000449116 PTPRUQ92729 1446 aa20.69■□□□□ 0.9
SHANK2-210ENST00000449116 STK26Q9P289 416 aa20.68■□□□□ 0.9
SHANK2-210ENST00000449116 ABCC11Q96J66 1382 aa20.68■□□□□ 0.9
SHANK2-210ENST00000449116 TRAK1Q9UPV9 953 aa20.67■□□□□ 0.9
SHANK2-210ENST00000449116 EIF3AQ14152 1382 aaKnown RBP20.67■□□□□ 0.9
SHANK2-210ENST00000449116 EIF4G2P78344 907 aaKnown RBP eCLIP20.66■□□□□ 0.9
SHANK2-210ENST00000449116 AMOTL2Q9Y2J4 779 aa20.66■□□□□ 0.9
SHANK2-210ENST00000449116 TECPR2O15040 1411 aa20.66■□□□□ 0.9
SHANK2-210ENST00000449116 KNDC1Q76NI1 1749 aa20.65■□□□□ 0.9
SHANK2-210ENST00000449116 DLC1Q96QB1 1528 aa20.65■□□□□ 0.9
SHANK2-210ENST00000449116 CHD2O14647 1828 aaKnown RBP20.64■□□□□ 0.9
SHANK2-210ENST00000449116 KCNA6P17658 529 aa20.64■□□□□ 0.89
SHANK2-210ENST00000449116 XRN1Q8IZH2 1706 aaKnown RBP20.64■□□□□ 0.89
SHANK2-210ENST00000449116 NWD1Q149M9 1564 aa20.63■□□□□ 0.89
SHANK2-210ENST00000449116 CPS1P31327 1500 aa20.63■□□□□ 0.89
SHANK2-210ENST00000449116 SIRT1Q96EB6 747 aa20.63■□□□□ 0.89
SHANK2-210ENST00000449116 PTCH1Q13635 1447 aa20.62■□□□□ 0.89
SHANK2-210ENST00000449116 ARHGEF28Q8N1W1 1705 aaKnown RBP20.62■□□□□ 0.89
SHANK2-210ENST00000449116 HSPA5P11021 654 aaKnown RBP20.62■□□□□ 0.89
SHANK2-210ENST00000449116 FAM135BQ49AJ0 1406 aa20.61■□□□□ 0.89
SHANK2-210ENST00000449116 ROBO2Q9HCK4 1378 aa20.6■□□□□ 0.89
SHANK2-210ENST00000449116 CENPJQ9HC77 1338 aaPredicted RBP20.59■□□□□ 0.89
SHANK2-210ENST00000449116 ST20-MTHFSA0A0A6YYL1 179 aa20.59■□□□□ 0.89
SHANK2-210ENST00000449116 PRAM1Q96QH2 718 aa20.59■□□□□ 0.89
SHANK2-210ENST00000449116 NKTRP30414 1462 aaKnown RBP20.58■□□□□ 0.89
SHANK2-210ENST00000449116 POGKQ9P215 609 aa20.58■□□□□ 0.89
SHANK2-210ENST00000449116 ZNF335Q9H4Z2 1342 aaPredicted RBP20.56■□□□□ 0.88
SHANK2-210ENST00000449116 WAPLQ7Z5K2 1190 aa20.56■□□□□ 0.88
SHANK2-210ENST00000449116 PLEKHH1Q9ULM0 1364 aa20.56■□□□□ 0.88
SHANK2-210ENST00000449116 STRCP1A6NGW2 1772 aa20.54■□□□□ 0.88
SHANK2-210ENST00000449116 HIRIP3Q9BW71 556 aaPredicted RBP20.54■□□□□ 0.88
SHANK2-210ENST00000449116 SBNO2Q9Y2G9 1366 aa20.54■□□□□ 0.88
SHANK2-210ENST00000449116 SAFB2Q14151 953 aaKnown RBP eCLIP20.53■□□□□ 0.88
SHANK2-210ENST00000449116 TESK2Q96S53 571 aa20.53■□□□□ 0.88
SHANK2-210ENST00000449116 QRICH2Q9H0J4 1663 aa20.52■□□□□ 0.88
SHANK2-210ENST00000449116 SLC24A1O60721 1099 aa20.51■□□□□ 0.87
SHANK2-210ENST00000449116 PROSER2Q86WR7 435 aaPredicted RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms