RNA–Protein interactions for RNA: ENST00000448874.5

PTMA-208, Transcript of prothymosin alpha, humanhuman

TSL 2

Gene PTMA, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-208ENST00000448874 TMEM131LA2VDJ0 1609 aa25.52■■□□□ 1.68
PTMA-208ENST00000448874 ZFYVE9O95405 1425 aa25.51■■□□□ 1.67
PTMA-208ENST00000448874 KCNA6P17658 529 aa25.5■■□□□ 1.67
PTMA-208ENST00000448874 SENP3Q9H4L4 574 aaPredicted RBP25.5■■□□□ 1.67
PTMA-208ENST00000448874 NWD1Q149M9 1564 aa25.49■■□□□ 1.67
PTMA-208ENST00000448874 RIMS2Q9UQ26 1411 aa25.48■■□□□ 1.67
PTMA-208ENST00000448874 TMEM94Q12767 1356 aa25.48■■□□□ 1.67
PTMA-208ENST00000448874 BCANQ96GW7 911 aa25.48■■□□□ 1.67
PTMA-208ENST00000448874 NUP155O75694 1391 aa25.46■■□□□ 1.67
PTMA-208ENST00000448874 NKTRP30414 1462 aaKnown RBP25.46■■□□□ 1.67
PTMA-208ENST00000448874 PLEKHG1Q9ULL1 1385 aa25.45■■□□□ 1.67
PTMA-208ENST00000448874 PPP1R15AO75807 674 aaPredicted RBP25.45■■□□□ 1.66
PTMA-208ENST00000448874 CHGAP10645 457 aaKnown RBP25.44■■□□□ 1.66
PTMA-208ENST00000448874 PROSER2Q86WR7 435 aaPredicted RBP25.42■■□□□ 1.66
PTMA-208ENST00000448874 HDGFP51858 240 aaKnown RBP25.41■■□□□ 1.66
PTMA-208ENST00000448874 RBM33Q96EV2 1170 aaKnown RBP25.41■■□□□ 1.66
PTMA-208ENST00000448874 CHD2O14647 1828 aaKnown RBP25.4■■□□□ 1.66
PTMA-208ENST00000448874 FAM135BQ49AJ0 1406 aa25.37■■□□□ 1.65
PTMA-208ENST00000448874 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.37■■□□□ 1.65
PTMA-208ENST00000448874 RRBP1Q9P2E9 1410 aaKnown RBP25.37■■□□□ 1.65
PTMA-208ENST00000448874 SPHKAPQ2M3C7 1700 aa25.35■■□□□ 1.65
PTMA-208ENST00000448874 NUTM2DQ5VT03 806 aaPredicted RBP25.35■■□□□ 1.65
PTMA-208ENST00000448874 ROBO1Q9Y6N7 1651 aa25.35■■□□□ 1.65
PTMA-208ENST00000448874 PHF23Q9BUL5 403 aaPredicted RBP25.34■■□□□ 1.65
PTMA-208ENST00000448874 MSH6P52701 1360 aa25.33■■□□□ 1.65
PTMA-208ENST00000448874 DIP2AQ14689 1571 aa25.33■■□□□ 1.65
PTMA-208ENST00000448874 ADAMTS13Q76LX8 1427 aa25.33■■□□□ 1.65
PTMA-208ENST00000448874 TBX22Q9Y458 520 aa25.33■■□□□ 1.65
PTMA-208ENST00000448874 NAIPQ13075 1403 aa25.28■■□□□ 1.64
PTMA-208ENST00000448874 PIK3R4Q99570 1358 aa25.26■■□□□ 1.63
PTMA-208ENST00000448874 TRPM2O94759 1503 aa25.26■■□□□ 1.63
PTMA-208ENST00000448874 CLTCL1P53675 1640 aa25.23■■□□□ 1.63
PTMA-208ENST00000448874 NCOA3Q9Y6Q9 1424 aa25.23■■□□□ 1.63
PTMA-208ENST00000448874 NRXN3Q9Y4C0 1643 aa25.23■■□□□ 1.63
PTMA-208ENST00000448874 SLAIN2Q9P270 581 aa25.22■■□□□ 1.63
PTMA-208ENST00000448874 SETBP1Q9Y6X0 1596 aa25.21■■□□□ 1.63
PTMA-208ENST00000448874 ZNF326Q5BKZ1 582 aaKnown RBP25.2■■□□□ 1.62
PTMA-208ENST00000448874 C14orf37Q86TY3 774 aa25.2■■□□□ 1.62
PTMA-208ENST00000448874 PHLPP1O60346 1717 aa25.2■■□□□ 1.62
PTMA-208ENST00000448874 PTPRUQ92729 1446 aa25.2■■□□□ 1.62
PTMA-208ENST00000448874 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.18■■□□□ 1.62
PTMA-208ENST00000448874 HFM1A2PYH4 1435 aa25.18■■□□□ 1.62
PTMA-208ENST00000448874 AMOTL2Q9Y2J4 779 aa25.17■■□□□ 1.62
PTMA-208ENST00000448874 XRN1Q8IZH2 1706 aaKnown RBP25.16■■□□□ 1.62
PTMA-208ENST00000448874 KIF1BO60333 1816 aa25.16■■□□□ 1.62
PTMA-208ENST00000448874 NEXMIFQ5QGS0 1516 aa25.16■■□□□ 1.62
PTMA-208ENST00000448874 RGS17Q9UGC6 210 aaPredicted RBP25.14■■□□□ 1.62
PTMA-208ENST00000448874 C19orf44Q9H6X5 657 aa25.13■■□□□ 1.61
PTMA-208ENST00000448874 CADPS2Q86UW7 1296 aa25.12■■□□□ 1.61
PTMA-208ENST00000448874 TRIM52Q96A61 297 aa25.12■■□□□ 1.61
PTMA-208ENST00000448874 COL16A1Q07092 1604 aaPredicted RBP25.12■■□□□ 1.61
PTMA-208ENST00000448874 ATF3P18847 181 aa25.11■■□□□ 1.61
PTMA-208ENST00000448874 METP08581 1390 aa25.1■■□□□ 1.61
PTMA-208ENST00000448874 JCADQ9P266 1359 aa25.08■■□□□ 1.61
PTMA-208ENST00000448874 AHDC1Q5TGY3 1603 aaPredicted RBP25.07■■□□□ 1.6
PTMA-208ENST00000448874 DCCP43146 1447 aa25.06■■□□□ 1.6
PTMA-208ENST00000448874 SLC4A1APQ9BWU0 796 aaKnown RBP25.05■■□□□ 1.6
PTMA-208ENST00000448874 SETD1AO15047 1707 aaKnown RBP25■■□□□ 1.59
PTMA-208ENST00000448874 POTEAQ6S8J7 498 aa25■■□□□ 1.59
PTMA-208ENST00000448874 BRINP3Q76B58 766 aa25■■□□□ 1.59
PTMA-208ENST00000448874 NALCNQ8IZF0 1738 aa24.99■■□□□ 1.59
PTMA-208ENST00000448874 ADGRL3Q9HAR2 1447 aa24.99■■□□□ 1.59
PTMA-208ENST00000448874 PPLO60437 1756 aa24.98■■□□□ 1.59
PTMA-208ENST00000448874 SHPRHQ149N8 1683 aa24.98■■□□□ 1.59
PTMA-208ENST00000448874 ASXL1Q8IXJ9 1541 aa24.98■■□□□ 1.59
PTMA-208ENST00000448874 MST1RQ04912 1400 aa24.98■■□□□ 1.59
PTMA-208ENST00000448874 VGFO15240 615 aaPredicted RBP24.97■■□□□ 1.59
PTMA-208ENST00000448874 LRP6O75581 1613 aa24.97■■□□□ 1.59
PTMA-208ENST00000448874 SPATA31A6Q5VVP1 1343 aa24.95■■□□□ 1.58
PTMA-208ENST00000448874 RPGRIP1LQ68CZ1 1315 aa24.95■■□□□ 1.58
PTMA-208ENST00000448874 FOXD1Q16676 465 aa24.95■■□□□ 1.58
PTMA-208ENST00000448874 PTCH1Q13635 1447 aa24.94■■□□□ 1.58
PTMA-208ENST00000448874 NHSL1Q5SYE7 1610 aa24.94■■□□□ 1.58
PTMA-208ENST00000448874 CCDC144AA2RUR9 1427 aa24.9■■□□□ 1.58
PTMA-208ENST00000448874 MEX3CQ5U5Q3 659 aaKnown RBP24.89■■□□□ 1.58
PTMA-208ENST00000448874 ROBO2Q9HCK4 1378 aa24.89■■□□□ 1.57
PTMA-208ENST00000448874 PRAG1Q86YV5 1406 aa24.88■■□□□ 1.57
PTMA-208ENST00000448874 SETD5Q9C0A6 1442 aa24.87■■□□□ 1.57
PTMA-208ENST00000448874 MPHOSPH9Q99550 1183 aa24.86■■□□□ 1.57
PTMA-208ENST00000448874 C1orf167Q5SNV9 1468 aa24.84■■□□□ 1.57
PTMA-208ENST00000448874 IFT172Q9UG01 1749 aa24.84■■□□□ 1.57
PTMA-208ENST00000448874 SPATA31E1Q6ZUB1 1445 aa24.84■■□□□ 1.57
PTMA-208ENST00000448874 DDX17Q92841 729 aaKnown RBP24.83■■□□□ 1.57
PTMA-208ENST00000448874 NUTM2BA6NNL0 878 aaPredicted RBP24.82■■□□□ 1.56
PTMA-208ENST00000448874 NUTM2EB1AL46 878 aaPredicted RBP24.82■■□□□ 1.56
PTMA-208ENST00000448874 NUTM2AQ8IVF1 878 aaPredicted RBP24.82■■□□□ 1.56
PTMA-208ENST00000448874 ADGRF5Q8IZF2 1346 aa24.82■■□□□ 1.56
PTMA-208ENST00000448874 RGL3Q3MIN7 710 aa24.81■■□□□ 1.56
PTMA-208ENST00000448874 ZNF772Q68DY9 489 aaPredicted RBP24.8■■□□□ 1.56
PTMA-208ENST00000448874 LRRC59Q96AG4 307 aaKnown RBP24.8■■□□□ 1.56
PTMA-208ENST00000448874 LAMC1P11047 1609 aa24.79■■□□□ 1.56
PTMA-208ENST00000448874 ANKRD30BQ9BXX2 1392 aa24.79■■□□□ 1.56
PTMA-208ENST00000448874 PNPLA6Q8IY17 1366 aa24.78■■□□□ 1.56
PTMA-208ENST00000448874 CDC42BPGQ6DT37 1551 aa24.76■■□□□ 1.55
PTMA-208ENST00000448874 ORAI2Q96SN7 254 aa24.75■■□□□ 1.55
PTMA-208ENST00000448874 PIK3C2GO75747 1445 aa24.73■■□□□ 1.55
PTMA-208ENST00000448874 ACIN1Q9UKV3 1341 aaKnown RBP24.73■■□□□ 1.55
PTMA-208ENST00000448874 KNDC1Q76NI1 1749 aa24.72■■□□□ 1.55
PTMA-208ENST00000448874 TECPR2O15040 1411 aa24.72■■□□□ 1.55
PTMA-208ENST00000448874 LRPPRCP42704 1394 aaKnown RBP24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms