RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 ARHGAP23Q9P227 1491 aa17.16■□□□□ 0.34
RCL1-208ENST00000448872 DCAF11Q8TEB1 546 aa17.16■□□□□ 0.34
RCL1-208ENST00000448872 KDM2AQ9Y2K7 1162 aa17.16■□□□□ 0.34
RCL1-208ENST00000448872 SLIT1O75093 1534 aa17.15■□□□□ 0.34
RCL1-208ENST00000448872 RPGRIP1LQ68CZ1 1315 aa17.14■□□□□ 0.33
RCL1-208ENST00000448872 ANKLE2Q86XL3 938 aa17.14■□□□□ 0.33
RCL1-208ENST00000448872 TONSLQ96HA7 1378 aa17.14■□□□□ 0.33
RCL1-208ENST00000448872 ADGRF5Q8IZF2 1346 aa17.13■□□□□ 0.33
RCL1-208ENST00000448872 PPP1R15AO75807 674 aaPredicted RBP17.13■□□□□ 0.33
RCL1-208ENST00000448872 EID1Q9Y6B2 187 aa17.13■□□□□ 0.33
RCL1-208ENST00000448872 SETD1BQ9UPS6 1966 aaKnown RBP17.13■□□□□ 0.33
RCL1-208ENST00000448872 NEXMIFQ5QGS0 1516 aa17.13■□□□□ 0.33
RCL1-208ENST00000448872 NEURL4Q96JN8 1562 aa17.12■□□□□ 0.33
RCL1-208ENST00000448872 PIAS4Q8N2W9 510 aaPredicted RBP17.12■□□□□ 0.33
RCL1-208ENST00000448872 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.12■□□□□ 0.33
RCL1-208ENST00000448872 KDM5AP29375 1690 aaKnown RBP17.11■□□□□ 0.33
RCL1-208ENST00000448872 SCAF11Q99590 1463 aaKnown RBP17.11■□□□□ 0.33
RCL1-208ENST00000448872 VGFO15240 615 aaPredicted RBP17.1■□□□□ 0.33
RCL1-208ENST00000448872 HDGFP51858 240 aaKnown RBP17.1■□□□□ 0.33
RCL1-208ENST00000448872 KIF1BO60333 1816 aa17.09■□□□□ 0.33
RCL1-208ENST00000448872 BCANQ96GW7 911 aa17.08■□□□□ 0.32
RCL1-208ENST00000448872 MYO5BQ9ULV0 1848 aa17.08■□□□□ 0.32
RCL1-208ENST00000448872 PLEKHG1Q9ULL1 1385 aa17.06■□□□□ 0.32
RCL1-208ENST00000448872 SLC26A8Q96RN1 970 aa17.06■□□□□ 0.32
RCL1-208ENST00000448872 NPHP4O75161 1426 aaPredicted RBP17.06■□□□□ 0.32
RCL1-208ENST00000448872 MYOM2P54296 1465 aa17.06■□□□□ 0.32
RCL1-208ENST00000448872 NBPF8Q3BBV2 869 aa17.05■□□□□ 0.32
RCL1-208ENST00000448872 NRXN1Q9ULB1 1477 aa17.04■□□□□ 0.32
RCL1-208ENST00000448872 PIK3C2GO75747 1445 aa17.04■□□□□ 0.32
RCL1-208ENST00000448872 TIMELESSQ9UNS1 1208 aa17.04■□□□□ 0.32
RCL1-208ENST00000448872 MED14O60244 1454 aa17.04■□□□□ 0.32
RCL1-208ENST00000448872 ADAMTS13Q76LX8 1427 aa17.03■□□□□ 0.32
RCL1-208ENST00000448872 CFAP70Q5T0N1 1121 aa17.03■□□□□ 0.32
RCL1-208ENST00000448872 PRAG1Q86YV5 1406 aa17.02■□□□□ 0.32
RCL1-208ENST00000448872 PPLO60437 1756 aa17.01■□□□□ 0.31
RCL1-208ENST00000448872 KCNA4P22459 653 aa17.01■□□□□ 0.31
RCL1-208ENST00000448872 STAC3Q96MF2 364 aa17.01■□□□□ 0.31
RCL1-208ENST00000448872 IFT172Q9UG01 1749 aa17■□□□□ 0.31
RCL1-208ENST00000448872 STRCQ7RTU9 1775 aa17■□□□□ 0.31
RCL1-208ENST00000448872 C14orf93Q9H972 538 aaKnown RBP16.99■□□□□ 0.31
RCL1-208ENST00000448872 METP08581 1390 aa16.99■□□□□ 0.31
RCL1-208ENST00000448872 NBPF1Q3BBV0 1214 aa16.99■□□□□ 0.31
RCL1-208ENST00000448872 TMEM132EQ6IEE7 984 aa16.99■□□□□ 0.31
RCL1-208ENST00000448872 SETBP1Q9Y6X0 1596 aa16.98■□□□□ 0.31
RCL1-208ENST00000448872 TBX22Q9Y458 520 aa16.98■□□□□ 0.31
RCL1-208ENST00000448872 NRXN3Q9Y4C0 1643 aa16.98■□□□□ 0.31
RCL1-208ENST00000448872 DMRT2Q9Y5R5 561 aa16.96■□□□□ 0.31
RCL1-208ENST00000448872 ALKQ9UM73 1620 aa16.96■□□□□ 0.3
RCL1-208ENST00000448872 POLR1AO95602 1720 aaPredicted RBP16.95■□□□□ 0.3
RCL1-208ENST00000448872 IQGAP1P46940 1657 aa16.95■□□□□ 0.3
RCL1-208ENST00000448872 PTPRUQ92729 1446 aa16.93■□□□□ 0.3
RCL1-208ENST00000448872 ZNF335Q9H4Z2 1342 aaPredicted RBP16.93■□□□□ 0.3
RCL1-208ENST00000448872 ASXL1Q8IXJ9 1541 aa16.93■□□□□ 0.3
RCL1-208ENST00000448872 STK26Q9P289 416 aa16.93■□□□□ 0.3
RCL1-208ENST00000448872 AMOTL2Q9Y2J4 779 aa16.91■□□□□ 0.3
RCL1-208ENST00000448872 ROCK2O75116 1388 aaKnown RBP16.9■□□□□ 0.3
RCL1-208ENST00000448872 ADGRB1O14514 1584 aa16.9■□□□□ 0.3
RCL1-208ENST00000448872 DIP2AQ14689 1571 aa16.89■□□□□ 0.29
RCL1-208ENST00000448872 KCNA6P17658 529 aa16.89■□□□□ 0.29
RCL1-208ENST00000448872 RALGAPBQ86X10 1494 aa16.89■□□□□ 0.29
RCL1-208ENST00000448872 TRAK1Q9UPV9 953 aa16.88■□□□□ 0.29
RCL1-208ENST00000448872 YTHDC2Q9H6S0 1430 aaKnown RBP16.88■□□□□ 0.29
RCL1-208ENST00000448872 RBM33Q96EV2 1170 aaKnown RBP16.87■□□□□ 0.29
RCL1-208ENST00000448872 CARD11Q9BXL7 1154 aa16.87■□□□□ 0.29
RCL1-208ENST00000448872 LRPPRCP42704 1394 aaKnown RBP16.87■□□□□ 0.29
RCL1-208ENST00000448872 PIK3R4Q99570 1358 aa16.87■□□□□ 0.29
RCL1-208ENST00000448872 SETD1AO15047 1707 aaKnown RBP16.87■□□□□ 0.29
RCL1-208ENST00000448872 GPRASP1Q5JY77 1395 aa16.86■□□□□ 0.29
RCL1-208ENST00000448872 ROBO2Q9HCK4 1378 aa16.86■□□□□ 0.29
RCL1-208ENST00000448872 TRPM1Q7Z4N2 1603 aa16.85■□□□□ 0.29
RCL1-208ENST00000448872 ZEB1P37275 1124 aaPredicted RBP16.85■□□□□ 0.29
RCL1-208ENST00000448872 ABCC11Q96J66 1382 aa16.84■□□□□ 0.29
RCL1-208ENST00000448872 LAMC1P11047 1609 aa16.83■□□□□ 0.29
RCL1-208ENST00000448872 PLEKHH1Q9ULM0 1364 aa16.83■□□□□ 0.29
RCL1-208ENST00000448872 WAPLQ7Z5K2 1190 aa16.83■□□□□ 0.28
RCL1-208ENST00000448872 PRAM1Q96QH2 718 aa16.82■□□□□ 0.28
RCL1-208ENST00000448872 SAFB2Q14151 953 aaKnown RBP eCLIP16.81■□□□□ 0.28
RCL1-208ENST00000448872 TECPR2O15040 1411 aa16.81■□□□□ 0.28
RCL1-208ENST00000448872 PROSER2Q86WR7 435 aaPredicted RBP16.8■□□□□ 0.28
RCL1-208ENST00000448872 KIAA1210Q9ULL0 1709 aa16.8■□□□□ 0.28
RCL1-208ENST00000448872 NWD1Q149M9 1564 aa16.8■□□□□ 0.28
RCL1-208ENST00000448872 PTCH1Q13635 1447 aa16.79■□□□□ 0.28
RCL1-208ENST00000448872 XRN1Q8IZH2 1706 aaKnown RBP16.78■□□□□ 0.28
RCL1-208ENST00000448872 LTBP4Q8N2S1 1624 aa16.78■□□□□ 0.28
RCL1-208ENST00000448872 POGKQ9P215 609 aa16.78■□□□□ 0.28
RCL1-208ENST00000448872 TMEM94Q12767 1356 aa16.78■□□□□ 0.28
RCL1-208ENST00000448872 USP47Q96K76 1375 aa16.78■□□□□ 0.28
RCL1-208ENST00000448872 STRCP1A6NGW2 1772 aa16.77■□□□□ 0.28
RCL1-208ENST00000448872 SIRT1Q96EB6 747 aa16.77■□□□□ 0.28
RCL1-208ENST00000448872 NKTRP30414 1462 aaKnown RBP16.77■□□□□ 0.27
RCL1-208ENST00000448872 LRRC7Q96NW7 1537 aa16.77■□□□□ 0.27
RCL1-208ENST00000448872 PPP4R3CPQ6ZMV5 832 aa16.76■□□□□ 0.27
RCL1-208ENST00000448872 HIRIP3Q9BW71 556 aaPredicted RBP16.76■□□□□ 0.27
RCL1-208ENST00000448872 FAM135BQ49AJ0 1406 aa16.76■□□□□ 0.27
RCL1-208ENST00000448872 CPS1P31327 1500 aa16.76■□□□□ 0.27
RCL1-208ENST00000448872 ST20-MTHFSA0A0A6YYL1 179 aa16.75■□□□□ 0.27
RCL1-208ENST00000448872 DLC1Q96QB1 1528 aa16.75■□□□□ 0.27
RCL1-208ENST00000448872 CENPJQ9HC77 1338 aaPredicted RBP16.74■□□□□ 0.27
RCL1-208ENST00000448872 HSPA5P11021 654 aaKnown RBP16.74■□□□□ 0.27
RCL1-208ENST00000448872 CHD2O14647 1828 aaKnown RBP16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms