RNA–Protein interactions for RNA: ENST00000448637.5

LPP-208, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 5 BASIC

Gene LPP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-208ENST00000448637 TMEM132AQ24JP5 1023 aa10.08□□□□□ -0.8
LPP-208ENST00000448637 ERCC4Q92889 916 aaPredicted RBP10.08□□□□□ -0.8
LPP-208ENST00000448637 PDE3BQ13370 1112 aa10.08□□□□□ -0.8
LPP-208ENST00000448637 DDX58O95786 925 aaKnown RBP10.08□□□□□ -0.8
LPP-208ENST00000448637 PKD2Q13563 968 aa10.08□□□□□ -0.8
LPP-208ENST00000448637 ANKRD18AQ8IVF6 992 aa10.08□□□□□ -0.8
LPP-208ENST00000448637 HSPA5P11021 654 aaKnown RBP10.08□□□□□ -0.8
LPP-208ENST00000448637 CCAR1Q8IX12 1150 aaKnown RBP10.08□□□□□ -0.8
LPP-208ENST00000448637 EFCAB2Q5VUJ9 269 aa10.07□□□□□ -0.8
LPP-208ENST00000448637 C9orf78Q9NZ63 289 aaPredicted RBP10.07□□□□□ -0.8
LPP-208ENST00000448637 KLHL34Q8N239 644 aa10.07□□□□□ -0.8
LPP-208ENST00000448637 MNS1Q8NEH6 495 aa10.07□□□□□ -0.8
LPP-208ENST00000448637 BICD2Q8TD16 824 aa10.07□□□□□ -0.8
LPP-208ENST00000448637 PHLDB1Q86UU1 1377 aa10.07□□□□□ -0.8
LPP-208ENST00000448637 REC8O95072 547 aa10.07□□□□□ -0.8
LPP-208ENST00000448637 IFIT2P09913 472 aaKnown RBP10.07□□□□□ -0.8
LPP-208ENST00000448637 CLUAP1Q96AJ1 413 aa10.07□□□□□ -0.8
LPP-208ENST00000448637 ANO2Q9NQ90 1003 aa10.06□□□□□ -0.8
LPP-208ENST00000448637 XBP1P17861 261 aa10.06□□□□□ -0.8
LPP-208ENST00000448637 PKNOX2Q96KN3 472 aa10.06□□□□□ -0.8
LPP-208ENST00000448637 SASS6Q6UVJ0 657 aa10.05□□□□□ -0.8
LPP-208ENST00000448637 SAMD1Q6SPF0 538 aaPredicted RBP10.05□□□□□ -0.8
LPP-208ENST00000448637 CCDC73Q6ZRK6 1079 aa10.05□□□□□ -0.8
LPP-208ENST00000448637 OLFM4Q6UX06 510 aa10.04□□□□□ -0.8
LPP-208ENST00000448637 G3BP1Q13283 466 aaKnown RBP eCLIP10.04□□□□□ -0.8
LPP-208ENST00000448637 SYCP1Q15431 976 aa10.04□□□□□ -0.8
LPP-208ENST00000448637 ANKRD45Q5TZF3 282 aa10.04□□□□□ -0.8
LPP-208ENST00000448637 CAGE1Q8TC20 777 aa10.04□□□□□ -0.8
LPP-208ENST00000448637 COG3Q96JB2 828 aa10.04□□□□□ -0.8
LPP-208ENST00000448637 CEP164Q9UPV0 1460 aa10.04□□□□□ -0.8
LPP-208ENST00000448637 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.03□□□□□ -0.88e-7■■■□□ 15
LPP-208ENST00000448637 CARMIL2Q6F5E8 1435 aa10.03□□□□□ -0.8
LPP-208ENST00000448637 HSP90AB4PQ58FF6 505 aa10.03□□□□□ -0.8
LPP-208ENST00000448637 AEBP2Q6ZN18 517 aaPredicted RBP10.03□□□□□ -0.8
LPP-208ENST00000448637 H0YHG0 523 aa10.03□□□□□ -0.8
LPP-208ENST00000448637 NAT10Q9H0A0 1025 aaKnown RBP10.03□□□□□ -0.8
LPP-208ENST00000448637 RALYLQ86SE5 291 aaKnown RBP10.03□□□□□ -0.8
LPP-208ENST00000448637 CWC15Q9P013 229 aaKnown RBP10.03□□□□□ -0.8
LPP-208ENST00000448637 IKQ13123 557 aaPredicted RBP10.02□□□□□ -0.8
LPP-208ENST00000448637 ERLIN2O94905 339 aa10.02□□□□□ -0.81
LPP-208ENST00000448637 NEFHP12036 1026 aa10.02□□□□□ -0.81
LPP-208ENST00000448637 PHF23Q9BUL5 403 aaPredicted RBP10.02□□□□□ -0.81
LPP-208ENST00000448637 NGEFQ8N5V2 710 aa10.02□□□□□ -0.81
LPP-208ENST00000448637 ROCK1Q13464 1354 aa10.01□□□□□ -0.81
LPP-208ENST00000448637 EIF4G1Q04637 1599 aaKnown RBP10.01□□□□□ -0.81
LPP-208ENST00000448637 EZRP15311 586 aaKnown RBP10.01□□□□□ -0.81
LPP-208ENST00000448637 ZKSCAN2Q63HK3 967 aa10.01□□□□□ -0.81
LPP-208ENST00000448637 SYTL4Q96C24 671 aaPredicted RBP10.01□□□□□ -0.81
LPP-208ENST00000448637 CGNL1Q0VF96 1302 aa10.01□□□□□ -0.81
LPP-208ENST00000448637 ANKRD30AQ9BXX3 1397 aa10.01□□□□□ -0.81
LPP-208ENST00000448637 ERC2O15083 957 aa10.01□□□□□ -0.81
LPP-208ENST00000448637 FOXD4L6Q3SYB3 417 aaPredicted RBP10.01□□□□□ -0.81
LPP-208ENST00000448637 FOXD4L3Q6VB84 417 aaPredicted RBP10.01□□□□□ -0.81
LPP-208ENST00000448637 NLRP13Q86W25 1043 aa10.01□□□□□ -0.81
LPP-208ENST00000448637 WASHC2CQ9Y4E1 1318 aa10□□□□□ -0.81
LPP-208ENST00000448637 CCDC146Q8IYE0 955 aa10□□□□□ -0.81
LPP-208ENST00000448637 SMC3Q9UQE7 1217 aa10□□□□□ -0.81
LPP-208ENST00000448637 WRNQ14191 1432 aaPredicted RBP eCLIP10□□□□□ -0.81
LPP-208ENST00000448637 PIP4K2AP48426 406 aaPredicted RBP10□□□□□ -0.81
LPP-208ENST00000448637 KIF3BO15066 747 aa10□□□□□ -0.81
LPP-208ENST00000448637 NUP155O75694 1391 aa10□□□□□ -0.81
LPP-208ENST00000448637 CENPQQ7L2Z9 268 aaPredicted RBP10□□□□□ -0.81
LPP-208ENST00000448637 SMARCE1Q969G3 411 aa10□□□□□ -0.81
LPP-208ENST00000448637 CDK5RAP3Q96JB5 506 aa10□□□□□ -0.81
LPP-208ENST00000448637 CHMP5Q9NZZ3 219 aa10□□□□□ -0.81
LPP-208ENST00000448637 EIF2S2P20042 333 aaKnown RBP9.99□□□□□ -0.81
LPP-208ENST00000448637 SEPT7Q16181 437 aaKnown RBP9.99□□□□□ -0.81
LPP-208ENST00000448637 SART3Q15020 963 aaKnown RBP9.99□□□□□ -0.81
LPP-208ENST00000448637 FOXD1Q16676 465 aa9.99□□□□□ -0.81
LPP-208ENST00000448637 API5Q9BZZ5 524 aaKnown RBP9.99□□□□□ -0.81
LPP-208ENST00000448637 SLC3A2P08195 630 aaKnown RBP9.99□□□□□ -0.81
LPP-208ENST00000448637 DESP17661 470 aa9.99□□□□□ -0.81
LPP-208ENST00000448637 MAGEC2Q9UBF1 373 aaPredicted RBP9.99□□□□□ -0.81
LPP-208ENST00000448637 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.99□□□□□ -0.81
LPP-208ENST00000448637 CCP110O43303 1012 aa9.99□□□□□ -0.81
LPP-208ENST00000448637 CCDC27Q2M243 656 aa9.99□□□□□ -0.81
LPP-208ENST00000448637 FILIP1LQ4L180 1135 aa9.98□□□□□ -0.81
LPP-208ENST00000448637 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.98□□□□□ -0.81
LPP-208ENST00000448637 GOLGA6L7A0A1B0GV03 622 aa9.98□□□□□ -0.81
LPP-208ENST00000448637 TXLNAP40222 546 aa9.98□□□□□ -0.81
LPP-208ENST00000448637 VPS37CA5D8V6 355 aaPredicted RBP9.98□□□□□ -0.81
LPP-208ENST00000448637 TXLNBQ8N3L3 684 aa9.98□□□□□ -0.81
LPP-208ENST00000448637 CCDC97Q96F63 343 aaPredicted RBP9.98□□□□□ -0.81
LPP-208ENST00000448637 PDCL3Q9H2J4 239 aa9.98□□□□□ -0.81
LPP-208ENST00000448637 IFT57Q9NWB7 429 aa9.98□□□□□ -0.81
LPP-208ENST00000448637 NUTM2FA1L443 756 aa9.98□□□□□ -0.81
LPP-208ENST00000448637 FAM161AQ3B820 660 aa9.98□□□□□ -0.81
LPP-208ENST00000448637 LUC7LQ9NQ29 371 aaKnown RBP9.98□□□□□ -0.81
LPP-208ENST00000448637 SETD5Q9C0A6 1442 aa9.98□□□□□ -0.81
LPP-208ENST00000448637 ANKRD62A6NC57 917 aa9.97□□□□□ -0.81
LPP-208ENST00000448637 KRT18P05783 430 aaKnown RBP9.97□□□□□ -0.81
LPP-208ENST00000448637 PDILTQ8N807 584 aa9.97□□□□□ -0.81
LPP-208ENST00000448637 RSPH4AQ5TD94 716 aa9.97□□□□□ -0.81
LPP-208ENST00000448637 NUCB2P80303 420 aa9.97□□□□□ -0.81
LPP-208ENST00000448637 WASHC4Q2M389 1173 aa9.96□□□□□ -0.81
LPP-208ENST00000448637 ARHGAP35Q9NRY4 1499 aa9.96□□□□□ -0.81
LPP-208ENST00000448637 E9PSI1 815 aa9.96□□□□□ -0.81
LPP-208ENST00000448637 NEBLO76041 1014 aa9.96□□□□□ -0.81
LPP-208ENST00000448637 FYB1O15117 783 aa9.96□□□□□ -0.82
LPP-208ENST00000448637 TSPYL1Q9H0U9 437 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms