RNA–Protein interactions for RNA: ENST00000448471.2

CDK3-202, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDK3, Length 1,570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-202ENST00000448471 NWD1Q149M9 1564 aa21.71■■□□□ 1.07
CDK3-202ENST00000448471 NOS1P29475 1434 aa21.71■■□□□ 1.07
CDK3-202ENST00000448471 ANKRD30AQ9BXX3 1397 aa21.7■■□□□ 1.06
CDK3-202ENST00000448471 CHIC2Q9UKJ5 165 aa21.7■■□□□ 1.06
CDK3-202ENST00000448471 MSH6P52701 1360 aa21.69■■□□□ 1.06
CDK3-202ENST00000448471 FGD6Q6ZV73 1430 aa21.69■■□□□ 1.06
CDK3-202ENST00000448471 BCANQ96GW7 911 aa21.67■■□□□ 1.06
CDK3-202ENST00000448471 CCER1Q8TC90 406 aaPredicted RBP21.66■■□□□ 1.06
CDK3-202ENST00000448471 SLC52A1Q9NWF4 448 aa21.65■■□□□ 1.06
CDK3-202ENST00000448471 SLAIN2Q9P270 581 aa21.64■■□□□ 1.05
CDK3-202ENST00000448471 PHLPP1O60346 1717 aa21.64■■□□□ 1.05
CDK3-202ENST00000448471 JCADQ9P266 1359 aa21.63■■□□□ 1.05
CDK3-202ENST00000448471 PLEKHG1Q9ULL1 1385 aa21.61■■□□□ 1.05
CDK3-202ENST00000448471 ZFYVE9O95405 1425 aa21.61■■□□□ 1.05
CDK3-202ENST00000448471 SETD1AO15047 1707 aaKnown RBP21.6■■□□□ 1.05
CDK3-202ENST00000448471 FAM50AQ14320 339 aaKnown RBP21.6■■□□□ 1.05
CDK3-202ENST00000448471 RPRD2Q5VT52 1461 aaKnown RBP21.59■■□□□ 1.05
CDK3-202ENST00000448471 ADGRL2O95490 1459 aa21.59■■□□□ 1.05
CDK3-202ENST00000448471 PPP1R15AO75807 674 aaPredicted RBP21.58■■□□□ 1.05
CDK3-202ENST00000448471 RIMS2Q9UQ26 1411 aa21.58■■□□□ 1.04
CDK3-202ENST00000448471 CHD2O14647 1828 aaKnown RBP21.57■■□□□ 1.04
CDK3-202ENST00000448471 COL16A1Q07092 1604 aaPredicted RBP21.56■■□□□ 1.04
CDK3-202ENST00000448471 GCC2Q8IWJ2 1684 aa21.55■■□□□ 1.04
CDK3-202ENST00000448471 HDGFP51858 240 aaKnown RBP21.55■■□□□ 1.04
CDK3-202ENST00000448471 MYO5BQ9ULV0 1848 aa21.54■■□□□ 1.04
CDK3-202ENST00000448471 ANKRD50Q9ULJ7 1429 aa21.54■■□□□ 1.04
CDK3-202ENST00000448471 NCOA3Q9Y6Q9 1424 aa21.53■■□□□ 1.04
CDK3-202ENST00000448471 TBX22Q9Y458 520 aa21.53■■□□□ 1.04
CDK3-202ENST00000448471 TMEM131LA2VDJ0 1609 aa21.53■■□□□ 1.04
CDK3-202ENST00000448471 LRP6O75581 1613 aa21.53■■□□□ 1.04
CDK3-202ENST00000448471 ITGAEP38570 1179 aa21.52■■□□□ 1.04
CDK3-202ENST00000448471 C14orf37Q86TY3 774 aa21.52■■□□□ 1.04
CDK3-202ENST00000448471 SPATA31A6Q5VVP1 1343 aa21.52■■□□□ 1.03
CDK3-202ENST00000448471 CHGAP10645 457 aaKnown RBP21.49■■□□□ 1.03
CDK3-202ENST00000448471 MEX3CQ5U5Q3 659 aaKnown RBP21.49■■□□□ 1.03
CDK3-202ENST00000448471 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.49■■□□□ 1.03
CDK3-202ENST00000448471 ADAMTS13Q76LX8 1427 aa21.48■■□□□ 1.03
CDK3-202ENST00000448471 SETD5Q9C0A6 1442 aa21.48■■□□□ 1.03
CDK3-202ENST00000448471 CADPS2Q86UW7 1296 aa21.48■■□□□ 1.03
CDK3-202ENST00000448471 AHDC1Q5TGY3 1603 aaPredicted RBP21.47■■□□□ 1.03
CDK3-202ENST00000448471 DIP2AQ14689 1571 aa21.47■■□□□ 1.03
CDK3-202ENST00000448471 ZNF772Q68DY9 489 aaPredicted RBP21.47■■□□□ 1.03
CDK3-202ENST00000448471 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.46■■□□□ 1.03
CDK3-202ENST00000448471 CLSPNQ9HAW4 1339 aa21.46■■□□□ 1.03
CDK3-202ENST00000448471 NUTM2DQ5VT03 806 aaPredicted RBP21.46■■□□□ 1.03
CDK3-202ENST00000448471 C19orf44Q9H6X5 657 aa21.46■■□□□ 1.03
CDK3-202ENST00000448471 PIK3R4Q99570 1358 aa21.45■■□□□ 1.02
CDK3-202ENST00000448471 ATF3P18847 181 aa21.45■■□□□ 1.02
CDK3-202ENST00000448471 SHPRHQ149N8 1683 aa21.44■■□□□ 1.02
CDK3-202ENST00000448471 UNC13BO14795 1591 aa21.44■■□□□ 1.02
CDK3-202ENST00000448471 UPF1Q92900 1129 aaKnown RBP eCLIP21.44■■□□□ 1.02
CDK3-202ENST00000448471 TRIM52Q96A61 297 aa21.44■■□□□ 1.02
CDK3-202ENST00000448471 RAB3GAP2Q9H2M9 1393 aa21.43■■□□□ 1.02
CDK3-202ENST00000448471 DHX57Q6P158 1386 aaKnown RBP21.42■■□□□ 1.02
CDK3-202ENST00000448471 E9PCH4 1651 aa21.41■■□□□ 1.02
CDK3-202ENST00000448471 TRPM2O94759 1503 aa21.41■■□□□ 1.02
CDK3-202ENST00000448471 BRINP3Q76B58 766 aa21.4■■□□□ 1.02
CDK3-202ENST00000448471 AMOTL2Q9Y2J4 779 aa21.39■■□□□ 1.01
CDK3-202ENST00000448471 HFM1A2PYH4 1435 aa21.38■■□□□ 1.01
CDK3-202ENST00000448471 PTPRUQ92729 1446 aa21.38■■□□□ 1.01
CDK3-202ENST00000448471 NUTM2BA6NNL0 878 aaPredicted RBP21.37■■□□□ 1.01
CDK3-202ENST00000448471 NUTM2EB1AL46 878 aaPredicted RBP21.37■■□□□ 1.01
CDK3-202ENST00000448471 RXRBP28702 533 aa21.37■■□□□ 1.01
CDK3-202ENST00000448471 NUTM2AQ8IVF1 878 aaPredicted RBP21.37■■□□□ 1.01
CDK3-202ENST00000448471 IQGAP3Q86VI3 1631 aa21.35■■□□□ 1.01
CDK3-202ENST00000448471 DCCP43146 1447 aa21.35■■□□□ 1.01
CDK3-202ENST00000448471 ASXL1Q8IXJ9 1541 aa21.34■■□□□ 1.01
CDK3-202ENST00000448471 CDK12Q9NYV4 1490 aaPredicted RBP21.34■■□□□ 1.01
CDK3-202ENST00000448471 AFF2P51816 1311 aa21.31■■□□□ 1
CDK3-202ENST00000448471 ROCK1Q13464 1354 aa21.31■■□□□ 1
CDK3-202ENST00000448471 MST1RQ04912 1400 aa21.31■■□□□ 1
CDK3-202ENST00000448471 NAIPQ13075 1403 aa21.31■■□□□ 1
CDK3-202ENST00000448471 XRN1Q8IZH2 1706 aaKnown RBP21.31■■□□□ 1
CDK3-202ENST00000448471 NUP155O75694 1391 aa21.3■■□□□ 1
CDK3-202ENST00000448471 NRXN3Q9Y4C0 1643 aa21.3■■□□□ 1
CDK3-202ENST00000448471 SETBP1Q9Y6X0 1596 aa21.29■■□□□ 1
CDK3-202ENST00000448471 NHSL1Q5SYE7 1610 aa21.28■■□□□ 1
CDK3-202ENST00000448471 LRRC59Q96AG4 307 aaKnown RBP21.27■□□□□ 0.99
CDK3-202ENST00000448471 METP08581 1390 aa21.24■□□□□ 0.99
CDK3-202ENST00000448471 C8orf37Q96NL8 207 aa21.24■□□□□ 0.99
CDK3-202ENST00000448471 RGS12O14924 1447 aa21.24■□□□□ 0.99
CDK3-202ENST00000448471 ACIN1Q9UKV3 1341 aaKnown RBP21.23■□□□□ 0.99
CDK3-202ENST00000448471 ZNF326Q5BKZ1 582 aaKnown RBP21.23■□□□□ 0.99
CDK3-202ENST00000448471 ADGRL3Q9HAR2 1447 aa21.23■□□□□ 0.99
CDK3-202ENST00000448471 PNPLA6Q8IY17 1366 aa21.23■□□□□ 0.99
CDK3-202ENST00000448471 DDX17Q92841 729 aaKnown RBP21.23■□□□□ 0.99
CDK3-202ENST00000448471 RBM6P78332 1123 aaKnown RBP21.21■□□□□ 0.99
CDK3-202ENST00000448471 QTRT2Q9H974 415 aaKnown RBP21.21■□□□□ 0.99
CDK3-202ENST00000448471 SPHKAPQ2M3C7 1700 aa21.21■□□□□ 0.99
CDK3-202ENST00000448471 NALCNQ8IZF0 1738 aa21.19■□□□□ 0.98
CDK3-202ENST00000448471 NEXMIFQ5QGS0 1516 aa21.16■□□□□ 0.98
CDK3-202ENST00000448471 C1orf167Q5SNV9 1468 aa21.15■□□□□ 0.98
CDK3-202ENST00000448471 ADAMTS2O95450 1211 aa21.14■□□□□ 0.98
CDK3-202ENST00000448471 NGLY1Q96IV0 654 aa21.14■□□□□ 0.98
CDK3-202ENST00000448471 CLTCL1P53675 1640 aa21.13■□□□□ 0.97
CDK3-202ENST00000448471 LAMC1P11047 1609 aa21.11■□□□□ 0.97
CDK3-202ENST00000448471 PTCH1Q13635 1447 aa21.1■□□□□ 0.97
CDK3-202ENST00000448471 ORAI2Q96SN7 254 aa21.09■□□□□ 0.97
CDK3-202ENST00000448471 SOS2Q07890 1332 aaPredicted RBP21.09■□□□□ 0.97
CDK3-202ENST00000448471 ATAD2Q6PL18 1390 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms