RNA–Protein interactions for RNA: ENST00000448450.5

HTATSF1-203, Transcript of HIV-1 Tat specific factor 1, humanhuman

TSL 5

Gene HTATSF1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-203ENST00000448450 KCNA6P17658 529 aa37.71■■■■□ 3.63
HTATSF1-203ENST00000448450 SLC26A8Q96RN1 970 aa37.7■■■■□ 3.63
HTATSF1-203ENST00000448450 RPRD2Q5VT52 1461 aaKnown RBP37.7■■■■□ 3.63
HTATSF1-203ENST00000448450 SLC52A1Q9NWF4 448 aa37.69■■■■□ 3.62
HTATSF1-203ENST00000448450 NKTRP30414 1462 aaKnown RBP37.68■■■■□ 3.62
HTATSF1-203ENST00000448450 NWD1Q149M9 1564 aa37.68■■■■□ 3.62
HTATSF1-203ENST00000448450 ROBO1Q9Y6N7 1651 aa37.65■■■■□ 3.62
HTATSF1-203ENST00000448450 GCC2Q8IWJ2 1684 aa37.64■■■■□ 3.62
HTATSF1-203ENST00000448450 PROSER2Q86WR7 435 aaPredicted RBP37.64■■■■□ 3.62
HTATSF1-203ENST00000448450 IQGAP3Q86VI3 1631 aa37.64■■■■□ 3.62
HTATSF1-203ENST00000448450 HFM1A2PYH4 1435 aa37.63■■■■□ 3.61
HTATSF1-203ENST00000448450 BCANQ96GW7 911 aa37.61■■■■□ 3.61
HTATSF1-203ENST00000448450 MYO5BQ9ULV0 1848 aa37.6■■■■□ 3.61
HTATSF1-203ENST00000448450 TRIM52Q96A61 297 aa37.57■■■■□ 3.6
HTATSF1-203ENST00000448450 E9PCH4 1651 aa37.56■■■■□ 3.6
HTATSF1-203ENST00000448450 RBM33Q96EV2 1170 aaKnown RBP37.56■■■■□ 3.6
HTATSF1-203ENST00000448450 ZFYVE9O95405 1425 aa37.55■■■■□ 3.6
HTATSF1-203ENST00000448450 RGS17Q9UGC6 210 aaPredicted RBP37.55■■■■□ 3.6
HTATSF1-203ENST00000448450 MSH6P52701 1360 aa37.55■■■■□ 3.6
HTATSF1-203ENST00000448450 PLEKHG1Q9ULL1 1385 aa37.53■■■■□ 3.6
HTATSF1-203ENST00000448450 TMEM131LA2VDJ0 1609 aa37.52■■■■□ 3.6
HTATSF1-203ENST00000448450 PPP1R15AO75807 674 aaPredicted RBP37.51■■■■□ 3.6
HTATSF1-203ENST00000448450 CHD2O14647 1828 aaKnown RBP37.51■■■■□ 3.6
HTATSF1-203ENST00000448450 RIMS2Q9UQ26 1411 aa37.51■■■■□ 3.59
HTATSF1-203ENST00000448450 HDGFP51858 240 aaKnown RBP37.5■■■■□ 3.59
HTATSF1-203ENST00000448450 PHLPP1O60346 1717 aa37.44■■■■□ 3.58
HTATSF1-203ENST00000448450 CHGAP10645 457 aaKnown RBP37.41■■■■□ 3.58
HTATSF1-203ENST00000448450 SLAIN2Q9P270 581 aa37.41■■■■□ 3.58
HTATSF1-203ENST00000448450 ABCF1Q8NE71 845 aaKnown RBP eCLIP37.39■■■■□ 3.58
HTATSF1-203ENST00000448450 SLC4A1APQ9BWU0 796 aaKnown RBP37.37■■■■□ 3.57
HTATSF1-203ENST00000448450 DIP2AQ14689 1571 aa37.37■■■■□ 3.57
HTATSF1-203ENST00000448450 TBX22Q9Y458 520 aa37.36■■■■□ 3.57
HTATSF1-203ENST00000448450 NCOA3Q9Y6Q9 1424 aa37.35■■■■□ 3.57
HTATSF1-203ENST00000448450 POTEAQ6S8J7 498 aa37.33■■■■□ 3.57
HTATSF1-203ENST00000448450 SETD5Q9C0A6 1442 aa37.33■■■■□ 3.57
HTATSF1-203ENST00000448450 JCADQ9P266 1359 aa37.32■■■■□ 3.57
HTATSF1-203ENST00000448450 SPHKAPQ2M3C7 1700 aa37.3■■■■□ 3.56
HTATSF1-203ENST00000448450 ADAMTS13Q76LX8 1427 aa37.29■■■■□ 3.56
HTATSF1-203ENST00000448450 C14orf37Q86TY3 774 aa37.29■■■■□ 3.56
HTATSF1-203ENST00000448450 COL16A1Q07092 1604 aaPredicted RBP37.28■■■■□ 3.56
HTATSF1-203ENST00000448450 PIK3R4Q99570 1358 aa37.28■■■■□ 3.56
HTATSF1-203ENST00000448450 SIPA1L2Q9P2F8 1722 aaPredicted RBP37.25■■■■□ 3.55
HTATSF1-203ENST00000448450 NUTM2DQ5VT03 806 aaPredicted RBP37.25■■■■□ 3.55
HTATSF1-203ENST00000448450 TRPM2O94759 1503 aa37.24■■■■□ 3.55
HTATSF1-203ENST00000448450 FOXD1Q16676 465 aa37.23■■■■□ 3.55
HTATSF1-203ENST00000448450 MPHOSPH9Q99550 1183 aa37.22■■■■□ 3.55
HTATSF1-203ENST00000448450 RAB3GAP2Q9H2M9 1393 aa37.21■■■■□ 3.55
HTATSF1-203ENST00000448450 CADPS2Q86UW7 1296 aa37.21■■■■□ 3.55
HTATSF1-203ENST00000448450 C19orf44Q9H6X5 657 aa37.18■■■■□ 3.54
HTATSF1-203ENST00000448450 AHDC1Q5TGY3 1603 aaPredicted RBP37.18■■■■□ 3.54
HTATSF1-203ENST00000448450 ATF3P18847 181 aa37.17■■■■□ 3.54
HTATSF1-203ENST00000448450 CLTCL1P53675 1640 aa37.14■■■■□ 3.54
HTATSF1-203ENST00000448450 SETD1AO15047 1707 aaKnown RBP37.14■■■■□ 3.54
HTATSF1-203ENST00000448450 SPATA31A6Q5VVP1 1343 aa37.13■■■■□ 3.54
HTATSF1-203ENST00000448450 ZNF326Q5BKZ1 582 aaKnown RBP37.13■■■■□ 3.53
HTATSF1-203ENST00000448450 ACIN1Q9UKV3 1341 aaKnown RBP37.12■■■■□ 3.53
HTATSF1-203ENST00000448450 SHPRHQ149N8 1683 aa37.12■■■■□ 3.53
HTATSF1-203ENST00000448450 AMOTL2Q9Y2J4 779 aa37.1■■■■□ 3.53
HTATSF1-203ENST00000448450 LRP6O75581 1613 aa37.1■■■■□ 3.53
HTATSF1-203ENST00000448450 PTPRUQ92729 1446 aa37.09■■■■□ 3.53
HTATSF1-203ENST00000448450 NRXN3Q9Y4C0 1643 aa37.08■■■■□ 3.53
HTATSF1-203ENST00000448450 SETBP1Q9Y6X0 1596 aa37.08■■■■□ 3.53
HTATSF1-203ENST00000448450 XRN1Q8IZH2 1706 aaKnown RBP37.07■■■■□ 3.53
HTATSF1-203ENST00000448450 MEX3CQ5U5Q3 659 aaKnown RBP37.07■■■■□ 3.52
HTATSF1-203ENST00000448450 DCCP43146 1447 aa37.07■■■■□ 3.52
HTATSF1-203ENST00000448450 KIF1BO60333 1816 aa37.03■■■■□ 3.52
HTATSF1-203ENST00000448450 BRINP3Q76B58 766 aa37■■■■□ 3.51
HTATSF1-203ENST00000448450 ZNF772Q68DY9 489 aaPredicted RBP36.99■■■■□ 3.51
HTATSF1-203ENST00000448450 ASXL1Q8IXJ9 1541 aa36.97■■■■□ 3.51
HTATSF1-203ENST00000448450 HRCP23327 699 aa36.96■■■■□ 3.51
HTATSF1-203ENST00000448450 CCDC144AA2RUR9 1427 aa36.93■■■■□ 3.5
HTATSF1-203ENST00000448450 MST1RQ04912 1400 aa36.92■■■■□ 3.5
HTATSF1-203ENST00000448450 NHSL1Q5SYE7 1610 aa36.92■■■■□ 3.5
HTATSF1-203ENST00000448450 METP08581 1390 aa36.91■■■■□ 3.5
HTATSF1-203ENST00000448450 NEXMIFQ5QGS0 1516 aa36.9■■■■□ 3.5
HTATSF1-203ENST00000448450 RGL3Q3MIN7 710 aa36.87■■■■□ 3.49
HTATSF1-203ENST00000448450 ADGRL3Q9HAR2 1447 aa36.86■■■■□ 3.49
HTATSF1-203ENST00000448450 NALCNQ8IZF0 1738 aa36.85■■■■□ 3.49
HTATSF1-203ENST00000448450 NUTM2BA6NNL0 878 aaPredicted RBP36.85■■■■□ 3.49
HTATSF1-203ENST00000448450 NUTM2EB1AL46 878 aaPredicted RBP36.85■■■■□ 3.49
HTATSF1-203ENST00000448450 NUTM2AQ8IVF1 878 aaPredicted RBP36.85■■■■□ 3.49
HTATSF1-203ENST00000448450 RPGRIP1LQ68CZ1 1315 aa36.82■■■■□ 3.48
HTATSF1-203ENST00000448450 VGFO15240 615 aaPredicted RBP36.8■■■■□ 3.48
HTATSF1-203ENST00000448450 RXRBP28702 533 aa36.79■■■■□ 3.48
HTATSF1-203ENST00000448450 LRRC59Q96AG4 307 aaKnown RBP36.78■■■■□ 3.48
HTATSF1-203ENST00000448450 SPATA31E1Q6ZUB1 1445 aa36.76■■■■□ 3.48
HTATSF1-203ENST00000448450 CDK12Q9NYV4 1490 aaPredicted RBP36.76■■■■□ 3.48
HTATSF1-203ENST00000448450 AFF2P51816 1311 aa36.75■■■■□ 3.47
HTATSF1-203ENST00000448450 UPF1Q92900 1129 aaKnown RBP eCLIP36.74■■■■□ 3.47
HTATSF1-203ENST00000448450 ANKRD30BQ9BXX2 1392 aa36.73■■■■□ 3.47
HTATSF1-203ENST00000448450 PPLO60437 1756 aa36.73■■■■□ 3.47
HTATSF1-203ENST00000448450 PTCH1Q13635 1447 aa36.71■■■■□ 3.47
HTATSF1-203ENST00000448450 PNPLA6Q8IY17 1366 aa36.7■■■■□ 3.47
HTATSF1-203ENST00000448450 DDX17Q92841 729 aaKnown RBP36.68■■■■□ 3.46
HTATSF1-203ENST00000448450 C1orf167Q5SNV9 1468 aa36.68■■■■□ 3.46
HTATSF1-203ENST00000448450 TRIM26Q12899 539 aaPredicted RBP36.67■■■■□ 3.46
HTATSF1-203ENST00000448450 ADGRF5Q8IZF2 1346 aa36.66■■■■□ 3.46
HTATSF1-203ENST00000448450 LAMC1P11047 1609 aa36.66■■■■□ 3.46
HTATSF1-203ENST00000448450 C8orf37Q96NL8 207 aa36.64■■■■□ 3.46
HTATSF1-203ENST00000448450 PRAG1Q86YV5 1406 aa36.61■■■■□ 3.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms