RNA–Protein interactions for RNA: ENST00000448340.5

HLCS-205, Transcript of holocarboxylase synthetase, humanhuman

TSL 1 (best)

Gene HLCS, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-205ENST00000448340 UBR1Q8IWV7 1749 aa26.11■■□□□ 1.77
HLCS-205ENST00000448340 SLIT1O75093 1534 aa26.1■■□□□ 1.77
HLCS-205ENST00000448340 TXNDC2Q86VQ3 553 aa26.1■■□□□ 1.77
HLCS-205ENST00000448340 SENP3Q9H4L4 574 aaPredicted RBP26.07■■□□□ 1.76
HLCS-205ENST00000448340 RGS17Q9UGC6 210 aaPredicted RBP26.07■■□□□ 1.76
HLCS-205ENST00000448340 SLC52A1Q9NWF4 448 aa26.04■■□□□ 1.76
HLCS-205ENST00000448340 SPHKAPQ2M3C7 1700 aa26.04■■□□□ 1.76
HLCS-205ENST00000448340 FOXD1Q16676 465 aa26.01■■□□□ 1.75
HLCS-205ENST00000448340 TMEM2Q9UHN6 1383 aa26.01■■□□□ 1.75
HLCS-205ENST00000448340 IDI1Q13907 227 aa26■■□□□ 1.75
HLCS-205ENST00000448340 EID1Q9Y6B2 187 aa26■■□□□ 1.75
HLCS-205ENST00000448340 TRPM2O94759 1503 aa25.99■■□□□ 1.75
HLCS-205ENST00000448340 FAM135BQ49AJ0 1406 aa25.98■■□□□ 1.75
HLCS-205ENST00000448340 PIK3C2BO00750 1634 aa25.98■■□□□ 1.75
HLCS-205ENST00000448340 XIRP1Q702N8 1843 aaKnown RBP25.97■■□□□ 1.75
HLCS-205ENST00000448340 TMEM94Q12767 1356 aa25.93■■□□□ 1.74
HLCS-205ENST00000448340 KDM5AP29375 1690 aaKnown RBP25.93■■□□□ 1.74
HLCS-205ENST00000448340 KCNA6P17658 529 aa25.92■■□□□ 1.74
HLCS-205ENST00000448340 STAG3Q9UJ98 1225 aa25.91■■□□□ 1.74
HLCS-205ENST00000448340 CLTCL1P53675 1640 aa25.91■■□□□ 1.74
HLCS-205ENST00000448340 ADGRB3O60242 1522 aa25.89■■□□□ 1.74
HLCS-205ENST00000448340 ANKRD30BQ9BXX2 1392 aa25.89■■□□□ 1.74
HLCS-205ENST00000448340 CCDC144AA2RUR9 1427 aa25.88■■□□□ 1.73
HLCS-205ENST00000448340 DHX57Q6P158 1386 aaKnown RBP25.87■■□□□ 1.73
HLCS-205ENST00000448340 SLC26A8Q96RN1 970 aa25.87■■□□□ 1.73
HLCS-205ENST00000448340 TMEM131LA2VDJ0 1609 aa25.87■■□□□ 1.73
HLCS-205ENST00000448340 CHGAP10645 457 aaKnown RBP25.85■■□□□ 1.73
HLCS-205ENST00000448340 POTEAQ6S8J7 498 aa25.85■■□□□ 1.73
HLCS-205ENST00000448340 KIF1BO60333 1816 aa25.84■■□□□ 1.73
HLCS-205ENST00000448340 PROSER2Q86WR7 435 aaPredicted RBP25.84■■□□□ 1.73
HLCS-205ENST00000448340 RBM33Q96EV2 1170 aaKnown RBP25.84■■□□□ 1.73
HLCS-205ENST00000448340 MYO5BQ9ULV0 1848 aa25.82■■□□□ 1.72
HLCS-205ENST00000448340 NKTRP30414 1462 aaKnown RBP25.77■■□□□ 1.72
HLCS-205ENST00000448340 ROBO1Q9Y6N7 1651 aa25.77■■□□□ 1.72
HLCS-205ENST00000448340 NWD1Q149M9 1564 aa25.76■■□□□ 1.71
HLCS-205ENST00000448340 HDGFP51858 240 aaKnown RBP25.75■■□□□ 1.71
HLCS-205ENST00000448340 SPATA31E1Q6ZUB1 1445 aa25.74■■□□□ 1.71
HLCS-205ENST00000448340 ZNF326Q5BKZ1 582 aaKnown RBP25.74■■□□□ 1.71
HLCS-205ENST00000448340 SLAIN2Q9P270 581 aa25.74■■□□□ 1.71
HLCS-205ENST00000448340 ZFYVE9O95405 1425 aa25.73■■□□□ 1.71
HLCS-205ENST00000448340 RIMS2Q9UQ26 1411 aa25.73■■□□□ 1.71
HLCS-205ENST00000448340 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.71■■□□□ 1.71
HLCS-205ENST00000448340 MSH6P52701 1360 aa25.7■■□□□ 1.71
HLCS-205ENST00000448340 RPGRIP1LQ68CZ1 1315 aa25.7■■□□□ 1.71
HLCS-205ENST00000448340 PLEKHG1Q9ULL1 1385 aa25.69■■□□□ 1.7
HLCS-205ENST00000448340 RGL3Q3MIN7 710 aa25.68■■□□□ 1.7
HLCS-205ENST00000448340 NEXMIFQ5QGS0 1516 aa25.67■■□□□ 1.7
HLCS-205ENST00000448340 PPP1R15AO75807 674 aaPredicted RBP25.65■■□□□ 1.7
HLCS-205ENST00000448340 BCANQ96GW7 911 aa25.65■■□□□ 1.7
HLCS-205ENST00000448340 SIN3AQ96ST3 1273 aa25.65■■□□□ 1.7
HLCS-205ENST00000448340 TBX22Q9Y458 520 aa25.65■■□□□ 1.7
HLCS-205ENST00000448340 JCADQ9P266 1359 aa25.65■■□□□ 1.7
HLCS-205ENST00000448340 NUTM2DQ5VT03 806 aaPredicted RBP25.63■■□□□ 1.69
HLCS-205ENST00000448340 NCOA3Q9Y6Q9 1424 aa25.63■■□□□ 1.69
HLCS-205ENST00000448340 PPLO60437 1756 aa25.62■■□□□ 1.69
HLCS-205ENST00000448340 VGFO15240 615 aaPredicted RBP25.62■■□□□ 1.69
HLCS-205ENST00000448340 CLSPNQ9HAW4 1339 aa25.62■■□□□ 1.69
HLCS-205ENST00000448340 CHD2O14647 1828 aaKnown RBP25.6■■□□□ 1.69
HLCS-205ENST00000448340 IFT172Q9UG01 1749 aa25.6■■□□□ 1.69
HLCS-205ENST00000448340 NEUROD1Q13562 356 aa25.59■■□□□ 1.69
HLCS-205ENST00000448340 ADAMTS13Q76LX8 1427 aa25.58■■□□□ 1.69
HLCS-205ENST00000448340 CCER1Q8TC90 406 aaPredicted RBP25.58■■□□□ 1.69
HLCS-205ENST00000448340 PHLPP1O60346 1717 aa25.57■■□□□ 1.68
HLCS-205ENST00000448340 COL16A1Q07092 1604 aaPredicted RBP25.56■■□□□ 1.68
HLCS-205ENST00000448340 STAC3Q96MF2 364 aa25.55■■□□□ 1.68
HLCS-205ENST00000448340 LRP6O75581 1613 aa25.54■■□□□ 1.68
HLCS-205ENST00000448340 C19orf44Q9H6X5 657 aa25.53■■□□□ 1.68
HLCS-205ENST00000448340 SPATA31A6Q5VVP1 1343 aa25.53■■□□□ 1.68
HLCS-205ENST00000448340 MYOM2P54296 1465 aa25.53■■□□□ 1.68
HLCS-205ENST00000448340 SETBP1Q9Y6X0 1596 aa25.52■■□□□ 1.68
HLCS-205ENST00000448340 DCAF11Q8TEB1 546 aa25.52■■□□□ 1.68
HLCS-205ENST00000448340 PIK3R4Q99570 1358 aa25.52■■□□□ 1.68
HLCS-205ENST00000448340 CADPS2Q86UW7 1296 aa25.51■■□□□ 1.67
HLCS-205ENST00000448340 ADGRF5Q8IZF2 1346 aa25.51■■□□□ 1.67
HLCS-205ENST00000448340 NRXN3Q9Y4C0 1643 aa25.48■■□□□ 1.67
HLCS-205ENST00000448340 DIP2AQ14689 1571 aa25.48■■□□□ 1.67
HLCS-205ENST00000448340 NRXN1Q9ULB1 1477 aa25.48■■□□□ 1.67
HLCS-205ENST00000448340 L3MBTL2Q969R5 705 aa25.48■■□□□ 1.67
HLCS-205ENST00000448340 KDM2AQ9Y2K7 1162 aa25.48■■□□□ 1.67
HLCS-205ENST00000448340 SETD1AO15047 1707 aaKnown RBP25.48■■□□□ 1.67
HLCS-205ENST00000448340 AHDC1Q5TGY3 1603 aaPredicted RBP25.48■■□□□ 1.67
HLCS-205ENST00000448340 PTPRUQ92729 1446 aa25.46■■□□□ 1.67
HLCS-205ENST00000448340 PIK3C2GO75747 1445 aa25.46■■□□□ 1.67
HLCS-205ENST00000448340 TONSLQ96HA7 1378 aa25.45■■□□□ 1.67
HLCS-205ENST00000448340 ATF3P18847 181 aa25.45■■□□□ 1.66
HLCS-205ENST00000448340 ZNF772Q68DY9 489 aaPredicted RBP25.45■■□□□ 1.66
HLCS-205ENST00000448340 C14orf37Q86TY3 774 aa25.45■■□□□ 1.66
HLCS-205ENST00000448340 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.45■■□□□ 1.66
HLCS-205ENST00000448340 BRINP3Q76B58 766 aa25.44■■□□□ 1.66
HLCS-205ENST00000448340 UPF1Q92900 1129 aaKnown RBP eCLIP25.44■■□□□ 1.66
HLCS-205ENST00000448340 AMOTL2Q9Y2J4 779 aa25.44■■□□□ 1.66
HLCS-205ENST00000448340 MEX3CQ5U5Q3 659 aaKnown RBP25.4■■□□□ 1.66
HLCS-205ENST00000448340 C14orf93Q9H972 538 aaKnown RBP25.39■■□□□ 1.66
HLCS-205ENST00000448340 TIMELESSQ9UNS1 1208 aa25.39■■□□□ 1.66
HLCS-205ENST00000448340 SHPRHQ149N8 1683 aa25.39■■□□□ 1.65
HLCS-205ENST00000448340 METP08581 1390 aa25.37■■□□□ 1.65
HLCS-205ENST00000448340 LAMC1P11047 1609 aa25.37■■□□□ 1.65
HLCS-205ENST00000448340 DCCP43146 1447 aa25.37■■□□□ 1.65
HLCS-205ENST00000448340 PRAG1Q86YV5 1406 aa25.36■■□□□ 1.65
HLCS-205ENST00000448340 CFAP70Q5T0N1 1121 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms