RNA–Protein interactions for RNA: ENST00000447872.5

VSTM1-206, Transcript of V-set and transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene VSTM1, Length 1,041 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-206ENST00000447872 RBM33Q96EV2 1170 aaKnown RBP15.86■□□□□ 0.13
VSTM1-206ENST00000447872 ROCK1Q13464 1354 aa15.86■□□□□ 0.13
VSTM1-206ENST00000447872 SETD1AO15047 1707 aaKnown RBP15.85■□□□□ 0.13
VSTM1-206ENST00000447872 ITGAEP38570 1179 aa15.85■□□□□ 0.13
VSTM1-206ENST00000447872 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.85■□□□□ 0.13
VSTM1-206ENST00000447872 UPF1Q92900 1129 aaKnown RBP eCLIP15.85■□□□□ 0.13
VSTM1-206ENST00000447872 KDM5AP29375 1690 aaKnown RBP15.85■□□□□ 0.13
VSTM1-206ENST00000447872 FAM135BQ49AJ0 1406 aa15.85■□□□□ 0.13
VSTM1-206ENST00000447872 ADGRB3O60242 1522 aa15.84■□□□□ 0.13
VSTM1-206ENST00000447872 TET3O43151 1660 aa15.84■□□□□ 0.13
VSTM1-206ENST00000447872 PLEKHG1Q9ULL1 1385 aa15.83■□□□□ 0.12
VSTM1-206ENST00000447872 RIMS2Q9UQ26 1411 aa15.83■□□□□ 0.12
VSTM1-206ENST00000447872 TBX22Q9Y458 520 aa15.82■□□□□ 0.12
VSTM1-206ENST00000447872 NUP155O75694 1391 aa15.81■□□□□ 0.12
VSTM1-206ENST00000447872 ZFYVE9O95405 1425 aa15.81■□□□□ 0.12
VSTM1-206ENST00000447872 MSH6P52701 1360 aa15.81■□□□□ 0.12
VSTM1-206ENST00000447872 PPARGC1BQ86YN6 1023 aaKnown RBP15.81■□□□□ 0.12
VSTM1-206ENST00000447872 SLAIN2Q9P270 581 aa15.8■□□□□ 0.12
VSTM1-206ENST00000447872 NKTRP30414 1462 aaKnown RBP15.79■□□□□ 0.12
VSTM1-206ENST00000447872 NUTM2DQ5VT03 806 aaPredicted RBP15.79■□□□□ 0.12
VSTM1-206ENST00000447872 C14orf37Q86TY3 774 aa15.77■□□□□ 0.12
VSTM1-206ENST00000447872 UNC13BO14795 1591 aa15.75■□□□□ 0.11
VSTM1-206ENST00000447872 TMEM131LA2VDJ0 1609 aa15.74■□□□□ 0.11
VSTM1-206ENST00000447872 C19orf44Q9H6X5 657 aa15.73■□□□□ 0.11
VSTM1-206ENST00000447872 NCOA3Q9Y6Q9 1424 aa15.73■□□□□ 0.11
VSTM1-206ENST00000447872 NWD1Q149M9 1564 aa15.73■□□□□ 0.11
VSTM1-206ENST00000447872 ATF3P18847 181 aa15.72■□□□□ 0.11
VSTM1-206ENST00000447872 CADPS2Q86UW7 1296 aa15.72■□□□□ 0.11
VSTM1-206ENST00000447872 XIRP1Q702N8 1843 aaKnown RBP15.72■□□□□ 0.11
VSTM1-206ENST00000447872 PIK3R4Q99570 1358 aa15.72■□□□□ 0.11
VSTM1-206ENST00000447872 ADAMTS13Q76LX8 1427 aa15.71■□□□□ 0.11
VSTM1-206ENST00000447872 AMOTL2Q9Y2J4 779 aa15.71■□□□□ 0.11
VSTM1-206ENST00000447872 ZNF326Q5BKZ1 582 aaKnown RBP15.7■□□□□ 0.1
VSTM1-206ENST00000447872 GCC2Q8IWJ2 1684 aa15.7■□□□□ 0.1
VSTM1-206ENST00000447872 IQGAP3Q86VI3 1631 aa15.69■□□□□ 0.1
VSTM1-206ENST00000447872 E9PCH4 1651 aa15.68■□□□□ 0.1
VSTM1-206ENST00000447872 ROBO1Q9Y6N7 1651 aa15.67■□□□□ 0.1
VSTM1-206ENST00000447872 JCADQ9P266 1359 aa15.67■□□□□ 0.1
VSTM1-206ENST00000447872 PCGF6Q9BYE7 350 aa15.67■□□□□ 0.1
VSTM1-206ENST00000447872 DIP2AQ14689 1571 aa15.65■□□□□ 0.1
VSTM1-206ENST00000447872 PTPRUQ92729 1446 aa15.63■□□□□ 0.09
VSTM1-206ENST00000447872 TRIM52Q96A61 297 aa15.63■□□□□ 0.09
VSTM1-206ENST00000447872 CHD2O14647 1828 aaKnown RBP15.63■□□□□ 0.09
VSTM1-206ENST00000447872 TRPM2O94759 1503 aa15.63■□□□□ 0.09
VSTM1-206ENST00000447872 RRBP1Q9P2E9 1410 aaKnown RBP15.62■□□□□ 0.09
VSTM1-206ENST00000447872 SPATA31A6Q5VVP1 1343 aa15.62■□□□□ 0.09
VSTM1-206ENST00000447872 MYO5BQ9ULV0 1848 aa15.61■□□□□ 0.09
VSTM1-206ENST00000447872 BRINP3Q76B58 766 aa15.61■□□□□ 0.09
VSTM1-206ENST00000447872 METP08581 1390 aa15.61■□□□□ 0.09
VSTM1-206ENST00000447872 NAIPQ13075 1403 aa15.6■□□□□ 0.09
VSTM1-206ENST00000447872 MEX3CQ5U5Q3 659 aaKnown RBP15.6■□□□□ 0.09
VSTM1-206ENST00000447872 VGFO15240 615 aaPredicted RBP15.59■□□□□ 0.09
VSTM1-206ENST00000447872 HRCP23327 699 aa15.59■□□□□ 0.09
VSTM1-206ENST00000447872 SLC4A1APQ9BWU0 796 aaKnown RBP15.58■□□□□ 0.08
VSTM1-206ENST00000447872 DCCP43146 1447 aa15.58■□□□□ 0.08
VSTM1-206ENST00000447872 TRIM26Q12899 539 aaPredicted RBP15.57■□□□□ 0.08
VSTM1-206ENST00000447872 SETBP1Q9Y6X0 1596 aa15.57■□□□□ 0.08
VSTM1-206ENST00000447872 PHLPP1O60346 1717 aa15.57■□□□□ 0.08
VSTM1-206ENST00000447872 ZNF772Q68DY9 489 aaPredicted RBP15.56■□□□□ 0.08
VSTM1-206ENST00000447872 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.54■□□□□ 0.08
VSTM1-206ENST00000447872 RPGRIP1LQ68CZ1 1315 aa15.54■□□□□ 0.08
VSTM1-206ENST00000447872 NUTM2BA6NNL0 878 aaPredicted RBP15.54■□□□□ 0.08
VSTM1-206ENST00000447872 NUTM2EB1AL46 878 aaPredicted RBP15.54■□□□□ 0.08
VSTM1-206ENST00000447872 NUTM2AQ8IVF1 878 aaPredicted RBP15.54■□□□□ 0.08
VSTM1-206ENST00000447872 COL16A1Q07092 1604 aaPredicted RBP15.54■□□□□ 0.08
VSTM1-206ENST00000447872 HFM1A2PYH4 1435 aa15.53■□□□□ 0.08
VSTM1-206ENST00000447872 LRRC59Q96AG4 307 aaKnown RBP15.53■□□□□ 0.08
VSTM1-206ENST00000447872 AHDC1Q5TGY3 1603 aaPredicted RBP15.53■□□□□ 0.08
VSTM1-206ENST00000447872 SPHKAPQ2M3C7 1700 aa15.52■□□□□ 0.08
VSTM1-206ENST00000447872 FOXD1Q16676 465 aa15.52■□□□□ 0.08
VSTM1-206ENST00000447872 MST1RQ04912 1400 aa15.51■□□□□ 0.07
VSTM1-206ENST00000447872 ADGRL3Q9HAR2 1447 aa15.51■□□□□ 0.07
VSTM1-206ENST00000447872 LRP6O75581 1613 aa15.5■□□□□ 0.07
VSTM1-206ENST00000447872 CLTCL1P53675 1640 aa15.5■□□□□ 0.07
VSTM1-206ENST00000447872 NRXN3Q9Y4C0 1643 aa15.5■□□□□ 0.07
VSTM1-206ENST00000447872 NEXMIFQ5QGS0 1516 aa15.5■□□□□ 0.07
VSTM1-206ENST00000447872 ZRANB1Q9UGI0 708 aa15.5■□□□□ 0.07
VSTM1-206ENST00000447872 ASXL1Q8IXJ9 1541 aa15.49■□□□□ 0.07
VSTM1-206ENST00000447872 XRN1Q8IZH2 1706 aaKnown RBP15.49■□□□□ 0.07
VSTM1-206ENST00000447872 CDK12Q9NYV4 1490 aaPredicted RBP15.49■□□□□ 0.07
VSTM1-206ENST00000447872 RXRBP28702 533 aa15.49■□□□□ 0.07
VSTM1-206ENST00000447872 DDX17Q92841 729 aaKnown RBP15.49■□□□□ 0.07
VSTM1-206ENST00000447872 SETD5Q9C0A6 1442 aa15.49■□□□□ 0.07
VSTM1-206ENST00000447872 ROBO2Q9HCK4 1378 aa15.47■□□□□ 0.07
VSTM1-206ENST00000447872 PTCH1Q13635 1447 aa15.45■□□□□ 0.06
VSTM1-206ENST00000447872 RGL3Q3MIN7 710 aa15.45■□□□□ 0.06
VSTM1-206ENST00000447872 C1orf167Q5SNV9 1468 aa15.45■□□□□ 0.06
VSTM1-206ENST00000447872 AFF2P51816 1311 aa15.44■□□□□ 0.06
VSTM1-206ENST00000447872 C8orf37Q96NL8 207 aa15.44■□□□□ 0.06
VSTM1-206ENST00000447872 ORAI2Q96SN7 254 aa15.44■□□□□ 0.06
VSTM1-206ENST00000447872 MPHOSPH9Q99550 1183 aa15.44■□□□□ 0.06
VSTM1-206ENST00000447872 SHPRHQ149N8 1683 aa15.42■□□□□ 0.06
VSTM1-206ENST00000447872 PNPLA6Q8IY17 1366 aa15.42■□□□□ 0.06
VSTM1-206ENST00000447872 QTRT2Q9H974 415 aaKnown RBP15.42■□□□□ 0.06
VSTM1-206ENST00000447872 CCDC144AA2RUR9 1427 aa15.42■□□□□ 0.06
VSTM1-206ENST00000447872 ADGRF5Q8IZF2 1346 aa15.42■□□□□ 0.06
VSTM1-206ENST00000447872 ADAMTS2O95450 1211 aa15.41■□□□□ 0.06
VSTM1-206ENST00000447872 IFFO2Q5TF58 517 aa15.41■□□□□ 0.06
VSTM1-206ENST00000447872 NGLY1Q96IV0 654 aa15.41■□□□□ 0.06
VSTM1-206ENST00000447872 STK26Q9P289 416 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms