RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 MROH2AA6NES4 1674 aa26.62■■□□□ 1.85
FAM3A-215ENST00000447601 SUPT16HQ9Y5B9 1047 aaKnown RBP26.62■■□□□ 1.85
FAM3A-215ENST00000447601 ADGRF5Q8IZF2 1346 aa26.62■■□□□ 1.85
FAM3A-215ENST00000447601 IFT172Q9UG01 1749 aa26.61■■□□□ 1.85
FAM3A-215ENST00000447601 CHGAP10645 457 aaKnown RBP26.6■■□□□ 1.85
FAM3A-215ENST00000447601 CNGB1Q14028 1251 aaPredicted RBP26.6■■□□□ 1.85
FAM3A-215ENST00000447601 RPGRIP1LQ68CZ1 1315 aa26.59■■□□□ 1.85
FAM3A-215ENST00000447601 CDCA8Q53HL2 280 aa26.59■■□□□ 1.85
FAM3A-215ENST00000447601 MYBBP1AQ9BQG0 1328 aaKnown RBP26.58■■□□□ 1.85
FAM3A-215ENST00000447601 CFAP70Q5T0N1 1121 aa26.57■■□□□ 1.84
FAM3A-215ENST00000447601 SLC24A1O60721 1099 aa26.56■■□□□ 1.84
FAM3A-215ENST00000447601 DNAJC5Q9H3Z4 198 aa26.56■■□□□ 1.84
FAM3A-215ENST00000447601 PER1O15534 1290 aaPredicted RBP26.55■■□□□ 1.84
FAM3A-215ENST00000447601 BRD4O60885 1362 aaPredicted RBP26.54■■□□□ 1.84
FAM3A-215ENST00000447601 PIK3C2BO00750 1634 aa26.53■■□□□ 1.84
FAM3A-215ENST00000447601 PARD3Q8TEW0 1356 aa26.53■■□□□ 1.84
FAM3A-215ENST00000447601 ZBED9Q6R2W3 1325 aa26.53■■□□□ 1.84
FAM3A-215ENST00000447601 TMC1Q8TDI8 760 aa26.53■■□□□ 1.84
FAM3A-215ENST00000447601 REREQ9P2R6 1566 aa26.52■■□□□ 1.84
FAM3A-215ENST00000447601 SYNMO15061 1565 aa26.52■■□□□ 1.84
FAM3A-215ENST00000447601 PANK3Q9H999 370 aa26.51■■□□□ 1.83
FAM3A-215ENST00000447601 PIK3C2GO75747 1445 aa26.51■■□□□ 1.83
FAM3A-215ENST00000447601 SIGLEC1Q9BZZ2 1709 aa26.51■■□□□ 1.83
FAM3A-215ENST00000447601 SETBP1Q9Y6X0 1596 aa26.5■■□□□ 1.83
FAM3A-215ENST00000447601 NEFLP07196 543 aa26.5■■□□□ 1.83
FAM3A-215ENST00000447601 TSPOAP1O95153 1857 aa26.49■■□□□ 1.83
FAM3A-215ENST00000447601 SLC52A1Q9NWF4 448 aa26.49■■□□□ 1.83
FAM3A-215ENST00000447601 AGLP35573 1532 aa26.48■■□□□ 1.83
FAM3A-215ENST00000447601 PPLO60437 1756 aa26.48■■□□□ 1.83
FAM3A-215ENST00000447601 PNISRQ8TF01 805 aaKnown RBP26.47■■□□□ 1.83
FAM3A-215ENST00000447601 PPP6R1Q9UPN7 881 aa26.46■■□□□ 1.83
FAM3A-215ENST00000447601 NLRP13Q86W25 1043 aa26.46■■□□□ 1.83
FAM3A-215ENST00000447601 C14orf93Q9H972 538 aaKnown RBP26.46■■□□□ 1.83
FAM3A-215ENST00000447601 SBNO2Q9Y2G9 1366 aa26.43■■□□□ 1.82
FAM3A-215ENST00000447601 VGFO15240 615 aaPredicted RBP26.43■■□□□ 1.82
FAM3A-215ENST00000447601 FKBP8Q14318 412 aa26.43■■□□□ 1.82
FAM3A-215ENST00000447601 CFAP65Q6ZU64 1925 aaKnown RBP26.42■■□□□ 1.82
FAM3A-215ENST00000447601 IDI1Q13907 227 aa26.42■■□□□ 1.82
FAM3A-215ENST00000447601 MYO3AQ8NEV4 1616 aa26.41■■□□□ 1.82
FAM3A-215ENST00000447601 LRPPRCP42704 1394 aaKnown RBP26.41■■□□□ 1.82
FAM3A-215ENST00000447601 NEXMIFQ5QGS0 1516 aa26.4■■□□□ 1.82
FAM3A-215ENST00000447601 ADGRB1O14514 1584 aa26.39■■□□□ 1.81
FAM3A-215ENST00000447601 PREX1Q8TCU6 1659 aa26.39■■□□□ 1.81
FAM3A-215ENST00000447601 CC2D1BQ5T0F9 858 aaKnown RBP26.38■■□□□ 1.81
FAM3A-215ENST00000447601 KNSTRNQ9Y448 316 aa26.38■■□□□ 1.81
FAM3A-215ENST00000447601 CENPJQ9HC77 1338 aaPredicted RBP26.37■■□□□ 1.81
FAM3A-215ENST00000447601 ZFYVE9O95405 1425 aa26.37■■□□□ 1.81
FAM3A-215ENST00000447601 ERVK-7P63135 1459 aa26.37■■□□□ 1.81
FAM3A-215ENST00000447601 KDM5AP29375 1690 aaKnown RBP26.37■■□□□ 1.81
FAM3A-215ENST00000447601 KIF13AQ9H1H9 1805 aa26.36■■□□□ 1.81
FAM3A-215ENST00000447601 ARHGEF40Q8TER5 1519 aa26.35■■□□□ 1.81
FAM3A-215ENST00000447601 PELP1Q8IZL8 1130 aaKnown RBP26.33■■□□□ 1.81
FAM3A-215ENST00000447601 MYOM1P52179 1685 aa26.32■■□□□ 1.8
FAM3A-215ENST00000447601 TRAK1Q9UPV9 953 aa26.31■■□□□ 1.8
FAM3A-215ENST00000447601 NPC1L1Q9UHC9 1359 aa26.31■■□□□ 1.8
FAM3A-215ENST00000447601 TMEM131LA2VDJ0 1609 aa26.3■■□□□ 1.8
FAM3A-215ENST00000447601 ASXL1Q8IXJ9 1541 aa26.3■■□□□ 1.8
FAM3A-215ENST00000447601 AMER1Q5JTC6 1135 aaPredicted RBP26.29■■□□□ 1.8
FAM3A-215ENST00000447601 FBXO31Q5XUX0 539 aaPredicted RBP26.29■■□□□ 1.8
FAM3A-215ENST00000447601 TMEM132EQ6IEE7 984 aa26.28■■□□□ 1.8
FAM3A-215ENST00000447601 NUTM2DQ5VT03 806 aaPredicted RBP26.27■■□□□ 1.8
FAM3A-215ENST00000447601 INSRP06213 1382 aa26.26■■□□□ 1.79
FAM3A-215ENST00000447601 SMG6Q86US8 1419 aaKnown RBP26.25■■□□□ 1.79
FAM3A-215ENST00000447601 CLTCQ00610 1675 aaKnown RBP26.23■■□□□ 1.79
FAM3A-215ENST00000447601 SPATA31D1Q6ZQQ2 1576 aa26.23■■□□□ 1.79
FAM3A-215ENST00000447601 BCANQ96GW7 911 aa26.23■■□□□ 1.79
FAM3A-215ENST00000447601 QRICH2Q9H0J4 1663 aa26.22■■□□□ 1.79
FAM3A-215ENST00000447601 STAG3Q9UJ98 1225 aa26.21■■□□□ 1.79
FAM3A-215ENST00000447601 MLECQ14165 292 aa26.2■■□□□ 1.78
FAM3A-215ENST00000447601 NUDCQ9Y266 331 aa26.19■■□□□ 1.78
FAM3A-215ENST00000447601 PPP2R1AP30153 589 aa26.18■■□□□ 1.78
FAM3A-215ENST00000447601 PUS7Q96PZ0 661 aaKnown RBP26.18■■□□□ 1.78
FAM3A-215ENST00000447601 ERICH6BQ5W0A0 696 aa26.17■■□□□ 1.78
FAM3A-215ENST00000447601 ESF1Q9H501 851 aaKnown RBP26.17■■□□□ 1.78
FAM3A-215ENST00000447601 MYO5BQ9ULV0 1848 aa26.15■■□□□ 1.78
FAM3A-215ENST00000447601 EVC2Q86UK5 1308 aa26.15■■□□□ 1.78
FAM3A-215ENST00000447601 ARHGEF28Q8N1W1 1705 aaKnown RBP26.15■■□□□ 1.78
FAM3A-215ENST00000447601 BLMP54132 1417 aaPredicted RBP26.14■■□□□ 1.78
FAM3A-215ENST00000447601 CARD14Q9BXL6 1004 aa26.14■■□□□ 1.77
FAM3A-215ENST00000447601 A2ML1A8K2U0 1454 aa26.13■■□□□ 1.77
FAM3A-215ENST00000447601 ZMYM3Q14202 1370 aa26.11■■□□□ 1.77
FAM3A-215ENST00000447601 TULP4Q9NRJ4 1543 aa26.09■■□□□ 1.77
FAM3A-215ENST00000447601 YTHDC2Q9H6S0 1430 aaKnown RBP26.09■■□□□ 1.77
FAM3A-215ENST00000447601 PDE3BQ13370 1112 aa26.08■■□□□ 1.77
FAM3A-215ENST00000447601 ALKQ9UM73 1620 aa26.07■■□□□ 1.76
FAM3A-215ENST00000447601 RIMS2Q9UQ26 1411 aa26.07■■□□□ 1.76
FAM3A-215ENST00000447601 WDR43Q15061 677 aaKnown RBP eCLIP26.07■■□□□ 1.76
FAM3A-215ENST00000447601 STK26Q9P289 416 aa26.07■■□□□ 1.76
FAM3A-215ENST00000447601 NSD3Q9BZ95 1437 aa26.06■■□□□ 1.76
FAM3A-215ENST00000447601 IRX6P78412 446 aaPredicted RBP26.06■■□□□ 1.76
FAM3A-215ENST00000447601 SLC12A5Q9H2X9 1139 aa26.06■■□□□ 1.76
FAM3A-215ENST00000447601 PTPRMP28827 1452 aa26.05■■□□□ 1.76
FAM3A-215ENST00000447601 SENP3-EIF4A1A0A087X0R7 540 aa26.04■■□□□ 1.76
FAM3A-215ENST00000447601 NINLQ9Y2I6 1382 aa26.03■■□□□ 1.76
FAM3A-215ENST00000447601 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.02■■□□□ 1.76
FAM3A-215ENST00000447601 ADAMTS8Q9UP79 889 aa26.02■■□□□ 1.76
FAM3A-215ENST00000447601 ANKRD36BQ8N2N9 1353 aa26.01■■□□□ 1.75
FAM3A-215ENST00000447601 TNRQ92752 1358 aa26■■□□□ 1.75
FAM3A-215ENST00000447601 RNF123Q5XPI4 1314 aa26■■□□□ 1.75
FAM3A-215ENST00000447601 USP32Q8NFA0 1604 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms