RNA–Protein interactions for RNA: ENST00000447394.1

HLA-DOB-207, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-207ENST00000447394 RIMS2Q9UQ26 1411 aa19.47■□□□□ 0.71
HLA-DOB-207ENST00000447394 NUTM2DQ5VT03 806 aaPredicted RBP19.46■□□□□ 0.71
HLA-DOB-207ENST00000447394 SCAF11Q99590 1463 aaKnown RBP19.46■□□□□ 0.71
HLA-DOB-207ENST00000447394 LTKP29376 864 aa19.44■□□□□ 0.7
HLA-DOB-207ENST00000447394 ZNF326Q5BKZ1 582 aaKnown RBP19.43■□□□□ 0.7
HLA-DOB-207ENST00000447394 NRXN3Q9Y4C0 1643 aa19.41■□□□□ 0.7
HLA-DOB-207ENST00000447394 RGL3Q3MIN7 710 aa19.41■□□□□ 0.7
HLA-DOB-207ENST00000447394 SIN3AQ96ST3 1273 aa19.41■□□□□ 0.7
HLA-DOB-207ENST00000447394 NPHP4O75161 1426 aaPredicted RBP19.41■□□□□ 0.7
HLA-DOB-207ENST00000447394 TXNDC2Q86VQ3 553 aa19.4■□□□□ 0.7
HLA-DOB-207ENST00000447394 ANKLE2Q86XL3 938 aa19.4■□□□□ 0.7
HLA-DOB-207ENST00000447394 MED14O60244 1454 aa19.4■□□□□ 0.7
HLA-DOB-207ENST00000447394 PPP1R15AO75807 674 aaPredicted RBP19.36■□□□□ 0.69
HLA-DOB-207ENST00000447394 EID1Q9Y6B2 187 aa19.36■□□□□ 0.69
HLA-DOB-207ENST00000447394 STRCP1A6NGW2 1772 aa19.35■□□□□ 0.69
HLA-DOB-207ENST00000447394 SETD1AO15047 1707 aaKnown RBP19.35■□□□□ 0.69
HLA-DOB-207ENST00000447394 NEUROD1Q13562 356 aa19.35■□□□□ 0.69
HLA-DOB-207ENST00000447394 PLEKHG1Q9ULL1 1385 aa19.33■□□□□ 0.69
HLA-DOB-207ENST00000447394 SETBP1Q9Y6X0 1596 aa19.33■□□□□ 0.69
HLA-DOB-207ENST00000447394 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.31■□□□□ 0.68
HLA-DOB-207ENST00000447394 ADGRF5Q8IZF2 1346 aa19.3■□□□□ 0.68
HLA-DOB-207ENST00000447394 MYOM2P54296 1465 aa19.3■□□□□ 0.68
HLA-DOB-207ENST00000447394 BCANQ96GW7 911 aa19.3■□□□□ 0.68
HLA-DOB-207ENST00000447394 SLC26A8Q96RN1 970 aa19.3■□□□□ 0.68
HLA-DOB-207ENST00000447394 ADAMTS13Q76LX8 1427 aa19.3■□□□□ 0.68
HLA-DOB-207ENST00000447394 RPGRIP1LQ68CZ1 1315 aa19.29■□□□□ 0.68
HLA-DOB-207ENST00000447394 CCER1Q8TC90 406 aaPredicted RBP19.29■□□□□ 0.68
HLA-DOB-207ENST00000447394 DIP2AQ14689 1571 aa19.28■□□□□ 0.68
HLA-DOB-207ENST00000447394 ALKQ9UM73 1620 aa19.27■□□□□ 0.68
HLA-DOB-207ENST00000447394 CHD2O14647 1828 aaKnown RBP19.27■□□□□ 0.68
HLA-DOB-207ENST00000447394 NRXN1Q9ULB1 1477 aa19.27■□□□□ 0.67
HLA-DOB-207ENST00000447394 HDGFP51858 240 aaKnown RBP19.26■□□□□ 0.67
HLA-DOB-207ENST00000447394 DCAF11Q8TEB1 546 aa19.26■□□□□ 0.67
HLA-DOB-207ENST00000447394 KDM2AQ9Y2K7 1162 aa19.26■□□□□ 0.67
HLA-DOB-207ENST00000447394 DMRT2Q9Y5R5 561 aa19.26■□□□□ 0.67
HLA-DOB-207ENST00000447394 ZNF335Q9H4Z2 1342 aaPredicted RBP19.25■□□□□ 0.67
HLA-DOB-207ENST00000447394 PIK3C2GO75747 1445 aa19.25■□□□□ 0.67
HLA-DOB-207ENST00000447394 ASXL1Q8IXJ9 1541 aa19.25■□□□□ 0.67
HLA-DOB-207ENST00000447394 VGFO15240 615 aaPredicted RBP19.24■□□□□ 0.67
HLA-DOB-207ENST00000447394 LTBP4Q8N2S1 1624 aa19.24■□□□□ 0.67
HLA-DOB-207ENST00000447394 LAMC1P11047 1609 aa19.23■□□□□ 0.67
HLA-DOB-207ENST00000447394 L3MBTL2Q969R5 705 aa19.23■□□□□ 0.67
HLA-DOB-207ENST00000447394 NWD1Q149M9 1564 aa19.23■□□□□ 0.67
HLA-DOB-207ENST00000447394 XRN1Q8IZH2 1706 aaKnown RBP19.22■□□□□ 0.67
HLA-DOB-207ENST00000447394 METP08581 1390 aa19.21■□□□□ 0.67
HLA-DOB-207ENST00000447394 XIRP1Q702N8 1843 aaKnown RBP19.21■□□□□ 0.67
HLA-DOB-207ENST00000447394 TONSLQ96HA7 1378 aa19.2■□□□□ 0.66
HLA-DOB-207ENST00000447394 PTPRUQ92729 1446 aa19.2■□□□□ 0.66
HLA-DOB-207ENST00000447394 TRPM1Q7Z4N2 1603 aa19.18■□□□□ 0.66
HLA-DOB-207ENST00000447394 PRAG1Q86YV5 1406 aa19.18■□□□□ 0.66
HLA-DOB-207ENST00000447394 KIAA1210Q9ULL0 1709 aa19.17■□□□□ 0.66
HLA-DOB-207ENST00000447394 TBX22Q9Y458 520 aa19.17■□□□□ 0.66
HLA-DOB-207ENST00000447394 CLSPNQ9HAW4 1339 aa19.17■□□□□ 0.66
HLA-DOB-207ENST00000447394 CFAP70Q5T0N1 1121 aa19.16■□□□□ 0.66
HLA-DOB-207ENST00000447394 ADGRB1O14514 1584 aa19.15■□□□□ 0.66
HLA-DOB-207ENST00000447394 KNDC1Q76NI1 1749 aa19.14■□□□□ 0.66
HLA-DOB-207ENST00000447394 TMEM132EQ6IEE7 984 aa19.13■□□□□ 0.65
HLA-DOB-207ENST00000447394 CPS1P31327 1500 aa19.13■□□□□ 0.65
HLA-DOB-207ENST00000447394 LRRC7Q96NW7 1537 aa19.12■□□□□ 0.65
HLA-DOB-207ENST00000447394 NKTRP30414 1462 aaKnown RBP19.11■□□□□ 0.65
HLA-DOB-207ENST00000447394 NBPF8Q3BBV2 869 aa19.11■□□□□ 0.65
HLA-DOB-207ENST00000447394 RBM33Q96EV2 1170 aaKnown RBP19.11■□□□□ 0.65
HLA-DOB-207ENST00000447394 C14orf93Q9H972 538 aaKnown RBP19.11■□□□□ 0.65
HLA-DOB-207ENST00000447394 PIK3R4Q99570 1358 aa19.1■□□□□ 0.65
HLA-DOB-207ENST00000447394 KCNA6P17658 529 aa19.1■□□□□ 0.65
HLA-DOB-207ENST00000447394 NALCNQ8IZF0 1738 aa19.09■□□□□ 0.65
HLA-DOB-207ENST00000447394 ARHGEF28Q8N1W1 1705 aaKnown RBP19.09■□□□□ 0.65
HLA-DOB-207ENST00000447394 AMOTL2Q9Y2J4 779 aa19.09■□□□□ 0.65
HLA-DOB-207ENST00000447394 STK26Q9P289 416 aa19.08■□□□□ 0.64
HLA-DOB-207ENST00000447394 YTHDC2Q9H6S0 1430 aaKnown RBP19.08■□□□□ 0.64
HLA-DOB-207ENST00000447394 NBPF1Q3BBV0 1214 aa19.07■□□□□ 0.64
HLA-DOB-207ENST00000447394 ROBO2Q9HCK4 1378 aa19.06■□□□□ 0.64
HLA-DOB-207ENST00000447394 STAC3Q96MF2 364 aa19.06■□□□□ 0.64
HLA-DOB-207ENST00000447394 LRPPRCP42704 1394 aaKnown RBP19.06■□□□□ 0.64
HLA-DOB-207ENST00000447394 TMEM94Q12767 1356 aa19.05■□□□□ 0.64
HLA-DOB-207ENST00000447394 RALGAPBQ86X10 1494 aa19.04■□□□□ 0.64
HLA-DOB-207ENST00000447394 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.03■□□□□ 0.64
HLA-DOB-207ENST00000447394 TECPR2O15040 1411 aa19.03■□□□□ 0.64
HLA-DOB-207ENST00000447394 PTCH1Q13635 1447 aa19.03■□□□□ 0.64
HLA-DOB-207ENST00000447394 PROSER2Q86WR7 435 aaPredicted RBP19.03■□□□□ 0.64
HLA-DOB-207ENST00000447394 CERKQ8TCT0 537 aa19.02■□□□□ 0.64
HLA-DOB-207ENST00000447394 PLEKHH1Q9ULM0 1364 aa19.02■□□□□ 0.64
HLA-DOB-207ENST00000447394 DLC1Q96QB1 1528 aa19■□□□□ 0.63
HLA-DOB-207ENST00000447394 ROCK2O75116 1388 aaKnown RBP19■□□□□ 0.63
HLA-DOB-207ENST00000447394 ABCC11Q96J66 1382 aa18.99■□□□□ 0.63
HLA-DOB-207ENST00000447394 TRAK1Q9UPV9 953 aa18.99■□□□□ 0.63
HLA-DOB-207ENST00000447394 QRICH2Q9H0J4 1663 aa18.98■□□□□ 0.63
HLA-DOB-207ENST00000447394 WAPLQ7Z5K2 1190 aa18.98■□□□□ 0.63
HLA-DOB-207ENST00000447394 TIMELESSQ9UNS1 1208 aa18.97■□□□□ 0.63
HLA-DOB-207ENST00000447394 IQSEC2Q5JU85 1478 aa18.97■□□□□ 0.63
HLA-DOB-207ENST00000447394 SAFB2Q14151 953 aaKnown RBP eCLIP18.96■□□□□ 0.63
HLA-DOB-207ENST00000447394 GPRASP1Q5JY77 1395 aa18.95■□□□□ 0.62
HLA-DOB-207ENST00000447394 FAM135BQ49AJ0 1406 aa18.94■□□□□ 0.62
HLA-DOB-207ENST00000447394 ADGRL3Q9HAR2 1447 aa18.94■□□□□ 0.62
HLA-DOB-207ENST00000447394 C14orf37Q86TY3 774 aa18.94■□□□□ 0.62
HLA-DOB-207ENST00000447394 PRAM1Q96QH2 718 aa18.94■□□□□ 0.62
HLA-DOB-207ENST00000447394 FMN2Q9NZ56 1722 aa18.92■□□□□ 0.62
HLA-DOB-207ENST00000447394 RGPD8O14715 1765 aaPredicted RBP18.91■□□□□ 0.62
HLA-DOB-207ENST00000447394 ADGRB2O60241 1585 aa18.91■□□□□ 0.62
HLA-DOB-207ENST00000447394 CDC42BPGQ6DT37 1551 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms