RNA–Protein interactions for RNA: ENST00000447283.6

GNE-203, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 5 BASIC

Gene GNE, Length 2,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-203ENST00000447283 CLTCL1P53675 1640 aa15.54■□□□□ 0.08
GNE-203ENST00000447283 CLTCQ00610 1675 aaKnown RBP15.54■□□□□ 0.08
GNE-203ENST00000447283 ZNF326Q5BKZ1 582 aaKnown RBP15.53■□□□□ 0.08
GNE-203ENST00000447283 UGGT1Q9NYU2 1555 aa15.53■□□□□ 0.08
GNE-203ENST00000447283 CHGAP10645 457 aaKnown RBP15.52■□□□□ 0.08
GNE-203ENST00000447283 IDI1Q13907 227 aa15.52■□□□□ 0.08
GNE-203ENST00000447283 STAC3Q96MF2 364 aa15.52■□□□□ 0.08
GNE-203ENST00000447283 SMG6Q86US8 1419 aaKnown RBP15.52■□□□□ 0.08
GNE-203ENST00000447283 USP47Q96K76 1375 aa15.51■□□□□ 0.07
GNE-203ENST00000447283 ERVK-7P63135 1459 aa15.5■□□□□ 0.07
GNE-203ENST00000447283 UHRF1BP1Q6BDS2 1440 aa15.5■□□□□ 0.07
GNE-203ENST00000447283 SYNMO15061 1565 aa15.49■□□□□ 0.07
GNE-203ENST00000447283 NEURL4Q96JN8 1562 aa15.49■□□□□ 0.07
GNE-203ENST00000447283 PREX1Q8TCU6 1659 aa15.48■□□□□ 0.07
GNE-203ENST00000447283 RALGAPBQ86X10 1494 aa15.47■□□□□ 0.07
GNE-203ENST00000447283 KIF1BO60333 1816 aa15.47■□□□□ 0.07
GNE-203ENST00000447283 ROCK2O75116 1388 aaKnown RBP15.46■□□□□ 0.07
GNE-203ENST00000447283 B4GALNT3Q6L9W6 998 aa15.46■□□□□ 0.07
GNE-203ENST00000447283 RNF123Q5XPI4 1314 aa15.46■□□□□ 0.07
GNE-203ENST00000447283 SPATA31D1Q6ZQQ2 1576 aa15.46■□□□□ 0.06
GNE-203ENST00000447283 RPGRIP1LQ68CZ1 1315 aa15.46■□□□□ 0.06
GNE-203ENST00000447283 PIK3C2BO00750 1634 aa15.45■□□□□ 0.06
GNE-203ENST00000447283 PRAG1Q86YV5 1406 aa15.45■□□□□ 0.06
GNE-203ENST00000447283 CEBPAP49715 358 aaPredicted RBP15.45■□□□□ 0.06
GNE-203ENST00000447283 STAG3Q9UJ98 1225 aa15.45■□□□□ 0.06
GNE-203ENST00000447283 ADGRB3O60242 1522 aa15.44■□□□□ 0.06
GNE-203ENST00000447283 NUDCQ9Y266 331 aa15.44■□□□□ 0.06
GNE-203ENST00000447283 MROH2AA6NES4 1674 aa15.43■□□□□ 0.06
GNE-203ENST00000447283 ERICH6Q7L0X2 663 aa15.42■□□□□ 0.06
GNE-203ENST00000447283 TNRQ92752 1358 aa15.42■□□□□ 0.06
GNE-203ENST00000447283 CARD11Q9BXL7 1154 aa15.41■□□□□ 0.06
GNE-203ENST00000447283 BCL11AQ9H165 835 aa15.41■□□□□ 0.06
GNE-203ENST00000447283 FER1L4A9Z1Z3 1794 aa15.41■□□□□ 0.06
GNE-203ENST00000447283 PLPPR3Q6T4P5 718 aa15.41■□□□□ 0.06
GNE-203ENST00000447283 VGFO15240 615 aaPredicted RBP15.4■□□□□ 0.06
GNE-203ENST00000447283 ADGRF5Q8IZF2 1346 aa15.39■□□□□ 0.05
GNE-203ENST00000447283 PNISRQ8TF01 805 aaKnown RBP15.39■□□□□ 0.05
GNE-203ENST00000447283 KTN1Q86UP2 1357 aaKnown RBP15.39■□□□□ 0.05
GNE-203ENST00000447283 NBPF1Q3BBV0 1214 aa15.39■□□□□ 0.05
GNE-203ENST00000447283 MYOM2P54296 1465 aa15.38■□□□□ 0.05
GNE-203ENST00000447283 TMEM131LA2VDJ0 1609 aa15.38■□□□□ 0.05
GNE-203ENST00000447283 LRPPRCP42704 1394 aaKnown RBP15.37■□□□□ 0.05
GNE-203ENST00000447283 C3P01024 1663 aa15.36■□□□□ 0.05
GNE-203ENST00000447283 MADDQ8WXG6 1647 aa15.36■□□□□ 0.05
GNE-203ENST00000447283 NUTM2DQ5VT03 806 aaPredicted RBP15.36■□□□□ 0.05
GNE-203ENST00000447283 ADAMTSL3P82987 1691 aa15.35■□□□□ 0.05
GNE-203ENST00000447283 POLR3GLQ9BT43 218 aa15.35■□□□□ 0.05
GNE-203ENST00000447283 BRD4O60885 1362 aaPredicted RBP15.35■□□□□ 0.05
GNE-203ENST00000447283 A2ML1A8K2U0 1454 aa15.35■□□□□ 0.05
GNE-203ENST00000447283 TRPM1Q7Z4N2 1603 aa15.35■□□□□ 0.05
GNE-203ENST00000447283 GPRASP1Q5JY77 1395 aa15.35■□□□□ 0.05
GNE-203ENST00000447283 NLRP1Q9C000 1473 aa15.34■□□□□ 0.05
GNE-203ENST00000447283 NRXN1Q9ULB1 1477 aa15.34■□□□□ 0.05
GNE-203ENST00000447283 CFAP70Q5T0N1 1121 aa15.34■□□□□ 0.05
GNE-203ENST00000447283 TMC1Q8TDI8 760 aa15.34■□□□□ 0.05
GNE-203ENST00000447283 IFT172Q9UG01 1749 aa15.34■□□□□ 0.05
GNE-203ENST00000447283 ZFYVE9O95405 1425 aa15.34■□□□□ 0.05
GNE-203ENST00000447283 NEXMIFQ5QGS0 1516 aa15.34■□□□□ 0.05
GNE-203ENST00000447283 HDGFP51858 240 aaKnown RBP15.34■□□□□ 0.05
GNE-203ENST00000447283 RIMS1Q86UR5 1692 aaKnown RBP15.33■□□□□ 0.04
GNE-203ENST00000447283 PPLO60437 1756 aa15.33■□□□□ 0.04
GNE-203ENST00000447283 RALBP1Q15311 655 aa15.32■□□□□ 0.04
GNE-203ENST00000447283 MYBBP1AQ9BQG0 1328 aaKnown RBP15.32■□□□□ 0.04
GNE-203ENST00000447283 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.32■□□□□ 0.04
GNE-203ENST00000447283 C14orf93Q9H972 538 aaKnown RBP15.32■□□□□ 0.04
GNE-203ENST00000447283 PIK3C2GO75747 1445 aa15.32■□□□□ 0.04
GNE-203ENST00000447283 CCDC136Q96JN2 1154 aa15.31■□□□□ 0.04
GNE-203ENST00000447283 MYO5BQ9ULV0 1848 aa15.3■□□□□ 0.04
GNE-203ENST00000447283 ST20-MTHFSA0A0A6YYL1 179 aa15.3■□□□□ 0.04
GNE-203ENST00000447283 RIMS2Q9UQ26 1411 aa15.3■□□□□ 0.04
GNE-203ENST00000447283 CNGB1Q14028 1251 aaPredicted RBP15.29■□□□□ 0.04
GNE-203ENST00000447283 THEMISQ8N1K5 641 aaPredicted RBP15.29■□□□□ 0.04
GNE-203ENST00000447283 TMEM2Q9UHN6 1383 aa15.28■□□□□ 0.04
GNE-203ENST00000447283 KIAA1210Q9ULL0 1709 aa15.28■□□□□ 0.04
GNE-203ENST00000447283 KDM5AP29375 1690 aaKnown RBP15.27■□□□□ 0.04
GNE-203ENST00000447283 DAXXQ9UER7 740 aaPredicted RBP15.27■□□□□ 0.04
GNE-203ENST00000447283 NOP58Q9Y2X3 529 aaKnown RBP15.27■□□□□ 0.04
GNE-203ENST00000447283 LAMC1P11047 1609 aa15.27■□□□□ 0.04
GNE-203ENST00000447283 PTPRMP28827 1452 aa15.26■□□□□ 0.03
GNE-203ENST00000447283 UBR1Q8IWV7 1749 aa15.26■□□□□ 0.03
GNE-203ENST00000447283 SENP3Q9H4L4 574 aaPredicted RBP15.25■□□□□ 0.03
GNE-203ENST00000447283 PARD3Q8TEW0 1356 aa15.25■□□□□ 0.03
GNE-203ENST00000447283 SCAF11Q99590 1463 aaKnown RBP15.25■□□□□ 0.03
GNE-203ENST00000447283 TMEM132EQ6IEE7 984 aa15.25■□□□□ 0.03
GNE-203ENST00000447283 EID1Q9Y6B2 187 aa15.25■□□□□ 0.03
GNE-203ENST00000447283 TXNDC2Q86VQ3 553 aa15.24■□□□□ 0.03
GNE-203ENST00000447283 NLRP13Q86W25 1043 aa15.23■□□□□ 0.03
GNE-203ENST00000447283 SETBP1Q9Y6X0 1596 aa15.23■□□□□ 0.03
GNE-203ENST00000447283 SETD1BQ9UPS6 1966 aaKnown RBP15.22■□□□□ 0.03
GNE-203ENST00000447283 EIF3AQ14152 1382 aaKnown RBP15.22■□□□□ 0.03
GNE-203ENST00000447283 MYO3AQ8NEV4 1616 aa15.22■□□□□ 0.03
GNE-203ENST00000447283 LTKP29376 864 aa15.22■□□□□ 0.03
GNE-203ENST00000447283 RRP1P56182 461 aaKnown RBP15.22■□□□□ 0.03
GNE-203ENST00000447283 PDE3BQ13370 1112 aa15.22■□□□□ 0.03
GNE-203ENST00000447283 INSRP06213 1382 aa15.21■□□□□ 0.03
GNE-203ENST00000447283 ANP32AP39687 249 aaKnown RBP15.21■□□□□ 0.02
GNE-203ENST00000447283 TESK2Q96S53 571 aa15.21■□□□□ 0.02
GNE-203ENST00000447283 TRAK1Q9UPV9 953 aa15.21■□□□□ 0.02
GNE-203ENST00000447283 IPO9Q96P70 1041 aaKnown RBP15.2■□□□□ 0.02
GNE-203ENST00000447283 ADGRB1O14514 1584 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms