RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 IDI1Q13907 227 aa18.33■□□□□ 0.53
DDX56-206ENST00000446987 ARHGAP23Q9P227 1491 aa18.33■□□□□ 0.52
DDX56-206ENST00000446987 SLIT1O75093 1534 aa18.32■□□□□ 0.52
DDX56-206ENST00000446987 MPHOSPH9Q99550 1183 aa18.32■□□□□ 0.52
DDX56-206ENST00000446987 FOXD1Q16676 465 aa18.31■□□□□ 0.52
DDX56-206ENST00000446987 SLC52A1Q9NWF4 448 aa18.29■□□□□ 0.52
DDX56-206ENST00000446987 MSH5O43196 834 aa18.26■□□□□ 0.51
DDX56-206ENST00000446987 KIF1BO60333 1816 aa18.26■□□□□ 0.51
DDX56-206ENST00000446987 ZFYVE9O95405 1425 aa18.26■□□□□ 0.51
DDX56-206ENST00000446987 TMEM2Q9UHN6 1383 aa18.25■□□□□ 0.51
DDX56-206ENST00000446987 MED14O60244 1454 aa18.24■□□□□ 0.51
DDX56-206ENST00000446987 NCKAP5LQ9HCH0 1330 aa18.24■□□□□ 0.51
DDX56-206ENST00000446987 THEMISQ8N1K5 641 aaPredicted RBP18.23■□□□□ 0.51
DDX56-206ENST00000446987 IQGAP1P46940 1657 aa18.23■□□□□ 0.51
DDX56-206ENST00000446987 SCAF11Q99590 1463 aaKnown RBP18.22■□□□□ 0.51
DDX56-206ENST00000446987 ANKRD30BQ9BXX2 1392 aa18.21■□□□□ 0.51
DDX56-206ENST00000446987 NEXMIFQ5QGS0 1516 aa18.21■□□□□ 0.51
DDX56-206ENST00000446987 LTKP29376 864 aa18.2■□□□□ 0.5
DDX56-206ENST00000446987 IFT172Q9UG01 1749 aa18.19■□□□□ 0.5
DDX56-206ENST00000446987 SPATA31E1Q6ZUB1 1445 aa18.19■□□□□ 0.5
DDX56-206ENST00000446987 RIMS2Q9UQ26 1411 aa18.19■□□□□ 0.5
DDX56-206ENST00000446987 PPLO60437 1756 aa18.18■□□□□ 0.5
DDX56-206ENST00000446987 CCDC144AA2RUR9 1427 aa18.18■□□□□ 0.5
DDX56-206ENST00000446987 UBE2Q2Q8WVN8 375 aa18.18■□□□□ 0.5
DDX56-206ENST00000446987 NPHP4O75161 1426 aaPredicted RBP18.17■□□□□ 0.5
DDX56-206ENST00000446987 DHX57Q6P158 1386 aaKnown RBP18.17■□□□□ 0.5
DDX56-206ENST00000446987 DEKP35659 375 aaKnown RBP18.16■□□□□ 0.5
DDX56-206ENST00000446987 NRXN3Q9Y4C0 1643 aa18.16■□□□□ 0.5
DDX56-206ENST00000446987 STAG3Q9UJ98 1225 aa18.16■□□□□ 0.5
DDX56-206ENST00000446987 NEFLP07196 543 aa18.15■□□□□ 0.5
DDX56-206ENST00000446987 FKBP8Q14318 412 aa18.15■□□□□ 0.5
DDX56-206ENST00000446987 ANKLE2Q86XL3 938 aa18.15■□□□□ 0.5
DDX56-206ENST00000446987 CHGAP10645 457 aaKnown RBP18.14■□□□□ 0.49
DDX56-206ENST00000446987 STRCP1A6NGW2 1772 aa18.13■□□□□ 0.49
DDX56-206ENST00000446987 TXNDC2Q86VQ3 553 aa18.12■□□□□ 0.49
DDX56-206ENST00000446987 ANO8Q9HCE9 1232 aaPredicted RBP18.12■□□□□ 0.49
DDX56-206ENST00000446987 LTBP4Q8N2S1 1624 aa18.11■□□□□ 0.49
DDX56-206ENST00000446987 PLEKHG1Q9ULL1 1385 aa18.1■□□□□ 0.49
DDX56-206ENST00000446987 SETBP1Q9Y6X0 1596 aa18.1■□□□□ 0.49
DDX56-206ENST00000446987 SETD1AO15047 1707 aaKnown RBP18.1■□□□□ 0.49
DDX56-206ENST00000446987 ADAMTS13Q76LX8 1427 aa18.09■□□□□ 0.49
DDX56-206ENST00000446987 DMRT2Q9Y5R5 561 aa18.09■□□□□ 0.49
DDX56-206ENST00000446987 NUTM2DQ5VT03 806 aaPredicted RBP18.08■□□□□ 0.49
DDX56-206ENST00000446987 EID1Q9Y6B2 187 aa18.07■□□□□ 0.48
DDX56-206ENST00000446987 DIP2AQ14689 1571 aa18.06■□□□□ 0.48
DDX56-206ENST00000446987 ZNF335Q9H4Z2 1342 aaPredicted RBP18.05■□□□□ 0.48
DDX56-206ENST00000446987 ZNF326Q5BKZ1 582 aaKnown RBP18.05■□□□□ 0.48
DDX56-206ENST00000446987 NWD1Q149M9 1564 aa18.04■□□□□ 0.48
DDX56-206ENST00000446987 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.03■□□□□ 0.48
DDX56-206ENST00000446987 BCANQ96GW7 911 aa18.03■□□□□ 0.48
DDX56-206ENST00000446987 MYOM2P54296 1465 aa18.03■□□□□ 0.48
DDX56-206ENST00000446987 NRXN1Q9ULB1 1477 aa18.03■□□□□ 0.48
DDX56-206ENST00000446987 CHD2O14647 1828 aaKnown RBP18.02■□□□□ 0.48
DDX56-206ENST00000446987 RPGRIP1LQ68CZ1 1315 aa18.02■□□□□ 0.48
DDX56-206ENST00000446987 RGL3Q3MIN7 710 aa18.01■□□□□ 0.47
DDX56-206ENST00000446987 SENP3Q9H4L4 574 aaPredicted RBP18.01■□□□□ 0.47
DDX56-206ENST00000446987 PPP1R15AO75807 674 aaPredicted RBP18.01■□□□□ 0.47
DDX56-206ENST00000446987 SLC26A8Q96RN1 970 aa18.01■□□□□ 0.47
DDX56-206ENST00000446987 ALKQ9UM73 1620 aa18■□□□□ 0.47
DDX56-206ENST00000446987 XIRP1Q702N8 1843 aaKnown RBP18■□□□□ 0.47
DDX56-206ENST00000446987 ADGRF5Q8IZF2 1346 aa17.99■□□□□ 0.47
DDX56-206ENST00000446987 ASXL1Q8IXJ9 1541 aa17.99■□□□□ 0.47
DDX56-206ENST00000446987 XRN1Q8IZH2 1706 aaKnown RBP17.99■□□□□ 0.47
DDX56-206ENST00000446987 PIK3C2GO75747 1445 aa17.99■□□□□ 0.47
DDX56-206ENST00000446987 PTPRUQ92729 1446 aa17.98■□□□□ 0.47
DDX56-206ENST00000446987 HDGFP51858 240 aaKnown RBP17.97■□□□□ 0.47
DDX56-206ENST00000446987 SIN3AQ96ST3 1273 aa17.97■□□□□ 0.47
DDX56-206ENST00000446987 CPS1P31327 1500 aa17.97■□□□□ 0.47
DDX56-206ENST00000446987 TBX22Q9Y458 520 aa17.95■□□□□ 0.46
DDX56-206ENST00000446987 METP08581 1390 aa17.95■□□□□ 0.46
DDX56-206ENST00000446987 LRRC7Q96NW7 1537 aa17.94■□□□□ 0.46
DDX56-206ENST00000446987 VGFO15240 615 aaPredicted RBP17.94■□□□□ 0.46
DDX56-206ENST00000446987 LAMC1P11047 1609 aa17.94■□□□□ 0.46
DDX56-206ENST00000446987 NKTRP30414 1462 aaKnown RBP17.93■□□□□ 0.46
DDX56-206ENST00000446987 SALL2Q9Y467 1007 aaPredicted RBP17.92■□□□□ 0.46
DDX56-206ENST00000446987 PIK3R4Q99570 1358 aa17.92■□□□□ 0.46
DDX56-206ENST00000446987 PRAG1Q86YV5 1406 aa17.9■□□□□ 0.46
DDX56-206ENST00000446987 IQSEC2Q5JU85 1478 aa17.9■□□□□ 0.46
DDX56-206ENST00000446987 CCER2I3L3R5 266 aa17.9■□□□□ 0.46
DDX56-206ENST00000446987 ADGRB1O14514 1584 aa17.9■□□□□ 0.46
DDX56-206ENST00000446987 KCNA6P17658 529 aa17.89■□□□□ 0.45
DDX56-206ENST00000446987 CERKQ8TCT0 537 aa17.89■□□□□ 0.45
DDX56-206ENST00000446987 KNDC1Q76NI1 1749 aa17.89■□□□□ 0.45
DDX56-206ENST00000446987 DCAF11Q8TEB1 546 aa17.88■□□□□ 0.45
DDX56-206ENST00000446987 KIAA1210Q9ULL0 1709 aa17.87■□□□□ 0.45
DDX56-206ENST00000446987 L3MBTL2Q969R5 705 aa17.86■□□□□ 0.45
DDX56-206ENST00000446987 KDM2AQ9Y2K7 1162 aa17.84■□□□□ 0.45
DDX56-206ENST00000446987 PTCH1Q13635 1447 aa17.84■□□□□ 0.45
DDX56-206ENST00000446987 C14orf93Q9H972 538 aaKnown RBP17.84■□□□□ 0.45
DDX56-206ENST00000446987 TRPM1Q7Z4N2 1603 aa17.84■□□□□ 0.45
DDX56-206ENST00000446987 TECPR2O15040 1411 aa17.83■□□□□ 0.45
DDX56-206ENST00000446987 NALCNQ8IZF0 1738 aa17.83■□□□□ 0.45
DDX56-206ENST00000446987 CFAP70Q5T0N1 1121 aa17.83■□□□□ 0.44
DDX56-206ENST00000446987 TMEM94Q12767 1356 aa17.83■□□□□ 0.44
DDX56-206ENST00000446987 AMOTL2Q9Y2J4 779 aa17.82■□□□□ 0.44
DDX56-206ENST00000446987 ROBO2Q9HCK4 1378 aa17.81■□□□□ 0.44
DDX56-206ENST00000446987 RBM33Q96EV2 1170 aaKnown RBP17.81■□□□□ 0.44
DDX56-206ENST00000446987 STAC3Q96MF2 364 aa17.81■□□□□ 0.44
DDX56-206ENST00000446987 NOP58Q9Y2X3 529 aaKnown RBP17.81■□□□□ 0.44
DDX56-206ENST00000446987 YTHDC2Q9H6S0 1430 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms