RNA–Protein interactions for RNA: ENST00000446739.1

PHTF1-207, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 4

Gene PHTF1, Length 770 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-207ENST00000446739 RIMS2Q9UQ26 1411 aa26.76■■□□□ 1.87
PHTF1-207ENST00000446739 LTKP29376 864 aa26.75■■□□□ 1.87
PHTF1-207ENST00000446739 HDGFP51858 240 aaKnown RBP26.75■■□□□ 1.87
PHTF1-207ENST00000446739 NPHP4O75161 1426 aaPredicted RBP26.74■■□□□ 1.87
PHTF1-207ENST00000446739 ZNF326Q5BKZ1 582 aaKnown RBP26.72■■□□□ 1.87
PHTF1-207ENST00000446739 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.72■■□□□ 1.87
PHTF1-207ENST00000446739 NEXMIFQ5QGS0 1516 aa26.69■■□□□ 1.86
PHTF1-207ENST00000446739 SPATA31E1Q6ZUB1 1445 aa26.68■■□□□ 1.86
PHTF1-207ENST00000446739 DHX57Q6P158 1386 aaKnown RBP26.68■■□□□ 1.86
PHTF1-207ENST00000446739 PPLO60437 1756 aa26.67■■□□□ 1.86
PHTF1-207ENST00000446739 PPP1R15AO75807 674 aaPredicted RBP26.67■■□□□ 1.86
PHTF1-207ENST00000446739 RPGRIP1LQ68CZ1 1315 aa26.65■■□□□ 1.86
PHTF1-207ENST00000446739 PLEKHG1Q9ULL1 1385 aa26.65■■□□□ 1.86
PHTF1-207ENST00000446739 IFT172Q9UG01 1749 aa26.63■■□□□ 1.85
PHTF1-207ENST00000446739 NUTM2DQ5VT03 806 aaPredicted RBP26.61■■□□□ 1.85
PHTF1-207ENST00000446739 RGL3Q3MIN7 710 aa26.6■■□□□ 1.85
PHTF1-207ENST00000446739 BCANQ96GW7 911 aa26.58■■□□□ 1.85
PHTF1-207ENST00000446739 VGFO15240 615 aaPredicted RBP26.57■■□□□ 1.84
PHTF1-207ENST00000446739 DIP2AQ14689 1571 aa26.56■■□□□ 1.84
PHTF1-207ENST00000446739 SETBP1Q9Y6X0 1596 aa26.56■■□□□ 1.84
PHTF1-207ENST00000446739 NRXN3Q9Y4C0 1643 aa26.54■■□□□ 1.84
PHTF1-207ENST00000446739 SLC26A8Q96RN1 970 aa26.53■■□□□ 1.84
PHTF1-207ENST00000446739 ADAMTS13Q76LX8 1427 aa26.52■■□□□ 1.84
PHTF1-207ENST00000446739 ZNF335Q9H4Z2 1342 aaPredicted RBP26.52■■□□□ 1.84
PHTF1-207ENST00000446739 LTBP4Q8N2S1 1624 aa26.51■■□□□ 1.83
PHTF1-207ENST00000446739 SENP3Q9H4L4 574 aaPredicted RBP26.5■■□□□ 1.83
PHTF1-207ENST00000446739 TBX22Q9Y458 520 aa26.5■■□□□ 1.83
PHTF1-207ENST00000446739 MYOM2P54296 1465 aa26.49■■□□□ 1.83
PHTF1-207ENST00000446739 CHD2O14647 1828 aaKnown RBP26.49■■□□□ 1.83
PHTF1-207ENST00000446739 STRCP1A6NGW2 1772 aa26.48■■□□□ 1.83
PHTF1-207ENST00000446739 CPS1P31327 1500 aa26.46■■□□□ 1.83
PHTF1-207ENST00000446739 ADGRF5Q8IZF2 1346 aa26.45■■□□□ 1.83
PHTF1-207ENST00000446739 STAC3Q96MF2 364 aa26.45■■□□□ 1.82
PHTF1-207ENST00000446739 SIN3AQ96ST3 1273 aa26.45■■□□□ 1.82
PHTF1-207ENST00000446739 SETD1AO15047 1707 aaKnown RBP26.45■■□□□ 1.82
PHTF1-207ENST00000446739 PIK3R4Q99570 1358 aa26.45■■□□□ 1.82
PHTF1-207ENST00000446739 NRXN1Q9ULB1 1477 aa26.43■■□□□ 1.82
PHTF1-207ENST00000446739 NWD1Q149M9 1564 aa26.43■■□□□ 1.82
PHTF1-207ENST00000446739 ALKQ9UM73 1620 aa26.43■■□□□ 1.82
PHTF1-207ENST00000446739 PIK3C2GO75747 1445 aa26.42■■□□□ 1.82
PHTF1-207ENST00000446739 KCNA6P17658 529 aa26.41■■□□□ 1.82
PHTF1-207ENST00000446739 DCAF11Q8TEB1 546 aa26.41■■□□□ 1.82
PHTF1-207ENST00000446739 NEUROD1Q13562 356 aa26.4■■□□□ 1.82
PHTF1-207ENST00000446739 LAMC1P11047 1609 aa26.39■■□□□ 1.81
PHTF1-207ENST00000446739 CERKQ8TCT0 537 aa26.37■■□□□ 1.81
PHTF1-207ENST00000446739 KDM2AQ9Y2K7 1162 aa26.37■■□□□ 1.81
PHTF1-207ENST00000446739 CLSPNQ9HAW4 1339 aa26.37■■□□□ 1.81
PHTF1-207ENST00000446739 NKTRP30414 1462 aaKnown RBP26.36■■□□□ 1.81
PHTF1-207ENST00000446739 METP08581 1390 aa26.36■■□□□ 1.81
PHTF1-207ENST00000446739 IQSEC2Q5JU85 1478 aa26.36■■□□□ 1.81
PHTF1-207ENST00000446739 XRN1Q8IZH2 1706 aaKnown RBP26.34■■□□□ 1.81
PHTF1-207ENST00000446739 PTPRUQ92729 1446 aa26.33■■□□□ 1.81
PHTF1-207ENST00000446739 LRRC7Q96NW7 1537 aa26.33■■□□□ 1.81
PHTF1-207ENST00000446739 XIRP1Q702N8 1843 aaKnown RBP26.32■■□□□ 1.8
PHTF1-207ENST00000446739 L3MBTL2Q969R5 705 aa26.31■■□□□ 1.8
PHTF1-207ENST00000446739 C14orf93Q9H972 538 aaKnown RBP26.31■■□□□ 1.8
PHTF1-207ENST00000446739 AMOTL2Q9Y2J4 779 aa26.3■■□□□ 1.8
PHTF1-207ENST00000446739 CCER1Q8TC90 406 aaPredicted RBP26.29■■□□□ 1.8
PHTF1-207ENST00000446739 TONSLQ96HA7 1378 aa26.28■■□□□ 1.8
PHTF1-207ENST00000446739 KIAA1210Q9ULL0 1709 aa26.28■■□□□ 1.8
PHTF1-207ENST00000446739 CFAP70Q5T0N1 1121 aa26.27■■□□□ 1.8
PHTF1-207ENST00000446739 PROSER2Q86WR7 435 aaPredicted RBP26.27■■□□□ 1.8
PHTF1-207ENST00000446739 ASXL1Q8IXJ9 1541 aa26.27■■□□□ 1.8
PHTF1-207ENST00000446739 PRAG1Q86YV5 1406 aa26.25■■□□□ 1.79
PHTF1-207ENST00000446739 KNDC1Q76NI1 1749 aa26.25■■□□□ 1.79
PHTF1-207ENST00000446739 TMEM94Q12767 1356 aa26.23■■□□□ 1.79
PHTF1-207ENST00000446739 PTCH1Q13635 1447 aa26.22■■□□□ 1.79
PHTF1-207ENST00000446739 NCOA3Q9Y6Q9 1424 aa26.22■■□□□ 1.79
PHTF1-207ENST00000446739 LRPPRCP42704 1394 aaKnown RBP26.21■■□□□ 1.79
PHTF1-207ENST00000446739 TMEM132EQ6IEE7 984 aa26.21■■□□□ 1.79
PHTF1-207ENST00000446739 ADGRB1O14514 1584 aa26.2■■□□□ 1.79
PHTF1-207ENST00000446739 YTHDC2Q9H6S0 1430 aaKnown RBP26.2■■□□□ 1.78
PHTF1-207ENST00000446739 TECPR2O15040 1411 aa26.19■■□□□ 1.78
PHTF1-207ENST00000446739 ABCC11Q96J66 1382 aa26.19■■□□□ 1.78
PHTF1-207ENST00000446739 RBM33Q96EV2 1170 aaKnown RBP26.16■■□□□ 1.78
PHTF1-207ENST00000446739 TRPM1Q7Z4N2 1603 aa26.16■■□□□ 1.78
PHTF1-207ENST00000446739 STK26Q9P289 416 aa26.15■■□□□ 1.78
PHTF1-207ENST00000446739 TIMELESSQ9UNS1 1208 aa26.15■■□□□ 1.78
PHTF1-207ENST00000446739 ROBO2Q9HCK4 1378 aa26.15■■□□□ 1.78
PHTF1-207ENST00000446739 MSH6P52701 1360 aa26.13■■□□□ 1.77
PHTF1-207ENST00000446739 DLC1Q96QB1 1528 aa26.12■■□□□ 1.77
PHTF1-207ENST00000446739 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.11■■□□□ 1.77
PHTF1-207ENST00000446739 C14orf37Q86TY3 774 aa26.11■■□□□ 1.77
PHTF1-207ENST00000446739 FBXO41Q8TF61 875 aa26.11■■□□□ 1.77
PHTF1-207ENST00000446739 SIRT1Q96EB6 747 aa26.11■■□□□ 1.77
PHTF1-207ENST00000446739 NALCNQ8IZF0 1738 aa26.11■■□□□ 1.77
PHTF1-207ENST00000446739 FAM135BQ49AJ0 1406 aa26.1■■□□□ 1.77
PHTF1-207ENST00000446739 UBAP1LF5GYI3 381 aa26.09■■□□□ 1.77
PHTF1-207ENST00000446739 TOM1O60784 492 aa26.09■■□□□ 1.77
PHTF1-207ENST00000446739 ADGRL3Q9HAR2 1447 aa26.08■■□□□ 1.77
PHTF1-207ENST00000446739 C19orf44Q9H6X5 657 aa26.08■■□□□ 1.77
PHTF1-207ENST00000446739 NBPF1Q3BBV0 1214 aa26.07■■□□□ 1.76
PHTF1-207ENST00000446739 NBPF8Q3BBV2 869 aa26.07■■□□□ 1.76
PHTF1-207ENST00000446739 ARHGEF28Q8N1W1 1705 aaKnown RBP26.07■■□□□ 1.76
PHTF1-207ENST00000446739 ILDR1Q86SU0 546 aaPredicted RBP26.06■■□□□ 1.76
PHTF1-207ENST00000446739 DCCP43146 1447 aa26.05■■□□□ 1.76
PHTF1-207ENST00000446739 TRAK1Q9UPV9 953 aa26.05■■□□□ 1.76
PHTF1-207ENST00000446739 WAPLQ7Z5K2 1190 aa26.04■■□□□ 1.76
PHTF1-207ENST00000446739 ROCK2O75116 1388 aaKnown RBP26.03■■□□□ 1.76
PHTF1-207ENST00000446739 RALGAPBQ86X10 1494 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms