RNA–Protein interactions for RNA: ENST00000446182.5

PTPRN-208, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 5

Gene PTPRN, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-208ENST00000446182 RBM33Q96EV2 1170 aaKnown RBP16.28■□□□□ 0.2
PTPRN-208ENST00000446182 RGS17Q9UGC6 210 aaPredicted RBP16.28■□□□□ 0.2
PTPRN-208ENST00000446182 ZFYVE9O95405 1425 aa16.28■□□□□ 0.2
PTPRN-208ENST00000446182 PLEKHG1Q9ULL1 1385 aa16.26■□□□□ 0.19
PTPRN-208ENST00000446182 BCANQ96GW7 911 aa16.24■□□□□ 0.19
PTPRN-208ENST00000446182 RIMS2Q9UQ26 1411 aa16.24■□□□□ 0.19
PTPRN-208ENST00000446182 ROBO1Q9Y6N7 1651 aa16.24■□□□□ 0.19
PTPRN-208ENST00000446182 TMEM131LA2VDJ0 1609 aa16.23■□□□□ 0.19
PTPRN-208ENST00000446182 UNC13BO14795 1591 aa16.22■□□□□ 0.19
PTPRN-208ENST00000446182 MSH6P52701 1360 aa16.22■□□□□ 0.19
PTPRN-208ENST00000446182 PPP1R15AO75807 674 aaPredicted RBP16.21■□□□□ 0.19
PTPRN-208ENST00000446182 GCC2Q8IWJ2 1684 aa16.21■□□□□ 0.18
PTPRN-208ENST00000446182 HDGFP51858 240 aaKnown RBP16.2■□□□□ 0.18
PTPRN-208ENST00000446182 ROCK1Q13464 1354 aa16.2■□□□□ 0.18
PTPRN-208ENST00000446182 MYO5BQ9ULV0 1848 aa16.19■□□□□ 0.18
PTPRN-208ENST00000446182 TBX22Q9Y458 520 aa16.19■□□□□ 0.18
PTPRN-208ENST00000446182 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.18■□□□□ 0.18
PTPRN-208ENST00000446182 SLAIN2Q9P270 581 aa16.18■□□□□ 0.18
PTPRN-208ENST00000446182 CHD2O14647 1828 aaKnown RBP16.17■□□□□ 0.18
PTPRN-208ENST00000446182 CHGAP10645 457 aaKnown RBP16.17■□□□□ 0.18
PTPRN-208ENST00000446182 POTEAQ6S8J7 498 aa16.17■□□□□ 0.18
PTPRN-208ENST00000446182 ADAMTS13Q76LX8 1427 aa16.17■□□□□ 0.18
PTPRN-208ENST00000446182 E9PCH4 1651 aa16.17■□□□□ 0.18
PTPRN-208ENST00000446182 NCOA3Q9Y6Q9 1424 aa16.16■□□□□ 0.18
PTPRN-208ENST00000446182 IQGAP3Q86VI3 1631 aa16.16■□□□□ 0.18
PTPRN-208ENST00000446182 NUTM2DQ5VT03 806 aaPredicted RBP16.14■□□□□ 0.17
PTPRN-208ENST00000446182 JCADQ9P266 1359 aa16.13■□□□□ 0.17
PTPRN-208ENST00000446182 DIP2AQ14689 1571 aa16.13■□□□□ 0.17
PTPRN-208ENST00000446182 PHLPP1O60346 1717 aa16.13■□□□□ 0.17
PTPRN-208ENST00000446182 NUP155O75694 1391 aa16.13■□□□□ 0.17
PTPRN-208ENST00000446182 PIK3R4Q99570 1358 aa16.13■□□□□ 0.17
PTPRN-208ENST00000446182 COL16A1Q07092 1604 aaPredicted RBP16.11■□□□□ 0.17
PTPRN-208ENST00000446182 C14orf37Q86TY3 774 aa16.1■□□□□ 0.17
PTPRN-208ENST00000446182 CADPS2Q86UW7 1296 aa16.09■□□□□ 0.17
PTPRN-208ENST00000446182 C19orf44Q9H6X5 657 aa16.09■□□□□ 0.17
PTPRN-208ENST00000446182 PTPRUQ92729 1446 aa16.09■□□□□ 0.17
PTPRN-208ENST00000446182 TRPM2O94759 1503 aa16.09■□□□□ 0.17
PTPRN-208ENST00000446182 ITGAEP38570 1179 aa16.08■□□□□ 0.16
PTPRN-208ENST00000446182 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.08■□□□□ 0.16
PTPRN-208ENST00000446182 AMOTL2Q9Y2J4 779 aa16.07■□□□□ 0.16
PTPRN-208ENST00000446182 LRP6O75581 1613 aa16.06■□□□□ 0.16
PTPRN-208ENST00000446182 AHDC1Q5TGY3 1603 aaPredicted RBP16.06■□□□□ 0.16
PTPRN-208ENST00000446182 ATF3P18847 181 aa16.06■□□□□ 0.16
PTPRN-208ENST00000446182 SPATA31A6Q5VVP1 1343 aa16.05■□□□□ 0.16
PTPRN-208ENST00000446182 NRXN3Q9Y4C0 1643 aa16.04■□□□□ 0.16
PTPRN-208ENST00000446182 SETBP1Q9Y6X0 1596 aa16.04■□□□□ 0.16
PTPRN-208ENST00000446182 BRINP3Q76B58 766 aa16.03■□□□□ 0.16
PTPRN-208ENST00000446182 DCCP43146 1447 aa16.02■□□□□ 0.16
PTPRN-208ENST00000446182 XRN1Q8IZH2 1706 aaKnown RBP16.02■□□□□ 0.16
PTPRN-208ENST00000446182 PPARGC1BQ86YN6 1023 aaKnown RBP16.02■□□□□ 0.16
PTPRN-208ENST00000446182 SPHKAPQ2M3C7 1700 aa16.02■□□□□ 0.15
PTPRN-208ENST00000446182 METP08581 1390 aa16■□□□□ 0.15
PTPRN-208ENST00000446182 SHPRHQ149N8 1683 aa16■□□□□ 0.15
PTPRN-208ENST00000446182 ZNF326Q5BKZ1 582 aaKnown RBP16■□□□□ 0.15
PTPRN-208ENST00000446182 MEX3CQ5U5Q3 659 aaKnown RBP16■□□□□ 0.15
PTPRN-208ENST00000446182 SETD1AO15047 1707 aaKnown RBP15.99■□□□□ 0.15
PTPRN-208ENST00000446182 MST1RQ04912 1400 aa15.99■□□□□ 0.15
PTPRN-208ENST00000446182 ASXL1Q8IXJ9 1541 aa15.99■□□□□ 0.15
PTPRN-208ENST00000446182 SRCAPQ6ZRS2 3230 aa15.98■□□□□ 0.15
PTPRN-208ENST00000446182 CLTCL1P53675 1640 aa15.97■□□□□ 0.15
PTPRN-208ENST00000446182 ZNF772Q68DY9 489 aaPredicted RBP15.97■□□□□ 0.15
PTPRN-208ENST00000446182 NEXMIFQ5QGS0 1516 aa15.97■□□□□ 0.15
PTPRN-208ENST00000446182 SETD5Q9C0A6 1442 aa15.96■□□□□ 0.15
PTPRN-208ENST00000446182 ADGRL3Q9HAR2 1447 aa15.95■□□□□ 0.14
PTPRN-208ENST00000446182 RRBP1Q9P2E9 1410 aaKnown RBP15.95■□□□□ 0.14
PTPRN-208ENST00000446182 NAIPQ13075 1403 aa15.94■□□□□ 0.14
PTPRN-208ENST00000446182 NUTM2BA6NNL0 878 aaPredicted RBP15.93■□□□□ 0.14
PTPRN-208ENST00000446182 NUTM2EB1AL46 878 aaPredicted RBP15.93■□□□□ 0.14
PTPRN-208ENST00000446182 NUTM2AQ8IVF1 878 aaPredicted RBP15.93■□□□□ 0.14
PTPRN-208ENST00000446182 NHSL1Q5SYE7 1610 aa15.93■□□□□ 0.14
PTPRN-208ENST00000446182 TRIM52Q96A61 297 aa15.92■□□□□ 0.14
PTPRN-208ENST00000446182 RXRBP28702 533 aa15.9■□□□□ 0.14
PTPRN-208ENST00000446182 DDX17Q92841 729 aaKnown RBP15.9■□□□□ 0.14
PTPRN-208ENST00000446182 LRRC59Q96AG4 307 aaKnown RBP15.9■□□□□ 0.14
PTPRN-208ENST00000446182 NALCNQ8IZF0 1738 aa15.9■□□□□ 0.14
PTPRN-208ENST00000446182 AFF2P51816 1311 aa15.9■□□□□ 0.14
PTPRN-208ENST00000446182 PNPLA6Q8IY17 1366 aa15.89■□□□□ 0.13
PTPRN-208ENST00000446182 PTCH1Q13635 1447 aa15.89■□□□□ 0.13
PTPRN-208ENST00000446182 UPF1Q92900 1129 aaKnown RBP eCLIP15.89■□□□□ 0.13
PTPRN-208ENST00000446182 C1orf167Q5SNV9 1468 aa15.89■□□□□ 0.13
PTPRN-208ENST00000446182 CDK12Q9NYV4 1490 aaPredicted RBP15.88■□□□□ 0.13
PTPRN-208ENST00000446182 KIF1BO60333 1816 aa15.87■□□□□ 0.13
PTPRN-208ENST00000446182 HFM1A2PYH4 1435 aa15.87■□□□□ 0.13
PTPRN-208ENST00000446182 PRAG1Q86YV5 1406 aa15.87■□□□□ 0.13
PTPRN-208ENST00000446182 VGFO15240 615 aaPredicted RBP15.87■□□□□ 0.13
PTPRN-208ENST00000446182 ROBO2Q9HCK4 1378 aa15.87■□□□□ 0.13
PTPRN-208ENST00000446182 RPGRIP1LQ68CZ1 1315 aa15.85■□□□□ 0.13
PTPRN-208ENST00000446182 C8orf37Q96NL8 207 aa15.84■□□□□ 0.13
PTPRN-208ENST00000446182 LAMC1P11047 1609 aa15.83■□□□□ 0.13
PTPRN-208ENST00000446182 SLC4A1APQ9BWU0 796 aaKnown RBP15.83■□□□□ 0.12
PTPRN-208ENST00000446182 ORAI2Q96SN7 254 aa15.82■□□□□ 0.12
PTPRN-208ENST00000446182 SOS2Q07890 1332 aaPredicted RBP15.82■□□□□ 0.12
PTPRN-208ENST00000446182 RGS12O14924 1447 aa15.81■□□□□ 0.12
PTPRN-208ENST00000446182 QTRT2Q9H974 415 aaKnown RBP15.81■□□□□ 0.12
PTPRN-208ENST00000446182 RBM6P78332 1123 aaKnown RBP15.8■□□□□ 0.12
PTPRN-208ENST00000446182 ADAMTS2O95450 1211 aa15.79■□□□□ 0.12
PTPRN-208ENST00000446182 PPLO60437 1756 aa15.79■□□□□ 0.12
PTPRN-208ENST00000446182 NGLY1Q96IV0 654 aa15.78■□□□□ 0.12
PTPRN-208ENST00000446182 FOXD1Q16676 465 aa15.77■□□□□ 0.12
PTPRN-208ENST00000446182 ADGRF5Q8IZF2 1346 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms