RNA–Protein interactions for RNA: ENST00000445676.5

UBE2F-216, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3

Gene UBE2F, Length 831 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-216ENST00000445676 COL16A1Q07092 1604 aaPredicted RBP23.32■■□□□ 1.32
UBE2F-216ENST00000445676 FGD6Q6ZV73 1430 aa23.32■■□□□ 1.32
UBE2F-216ENST00000445676 LOC105371045A0A1W2PR82 267 aa23.31■■□□□ 1.32
UBE2F-216ENST00000445676 ANKRD30AQ9BXX3 1397 aa23.3■■□□□ 1.32
UBE2F-216ENST00000445676 ZFYVE9O95405 1425 aa23.3■■□□□ 1.32
UBE2F-216ENST00000445676 JCADQ9P266 1359 aa23.28■■□□□ 1.32
UBE2F-216ENST00000445676 CHIC2Q9UKJ5 165 aa23.28■■□□□ 1.32
UBE2F-216ENST00000445676 SLAIN2Q9P270 581 aa23.26■■□□□ 1.31
UBE2F-216ENST00000445676 TMEM131LA2VDJ0 1609 aa23.26■■□□□ 1.31
UBE2F-216ENST00000445676 PLEKHG1Q9ULL1 1385 aa23.26■■□□□ 1.31
UBE2F-216ENST00000445676 ADGRL2O95490 1459 aa23.25■■□□□ 1.31
UBE2F-216ENST00000445676 SLC52A1Q9NWF4 448 aa23.25■■□□□ 1.31
UBE2F-216ENST00000445676 LRP6O75581 1613 aa23.25■■□□□ 1.31
UBE2F-216ENST00000445676 RPRD2Q5VT52 1461 aaKnown RBP23.24■■□□□ 1.31
UBE2F-216ENST00000445676 BCANQ96GW7 911 aa23.23■■□□□ 1.31
UBE2F-216ENST00000445676 RIMS2Q9UQ26 1411 aa23.22■■□□□ 1.31
UBE2F-216ENST00000445676 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.22■■□□□ 1.31
UBE2F-216ENST00000445676 SHPRHQ149N8 1683 aa23.21■■□□□ 1.31
UBE2F-216ENST00000445676 AHDC1Q5TGY3 1603 aaPredicted RBP23.2■■□□□ 1.3
UBE2F-216ENST00000445676 NCOA3Q9Y6Q9 1424 aa23.17■■□□□ 1.3
UBE2F-216ENST00000445676 DIP2AQ14689 1571 aa23.16■■□□□ 1.3
UBE2F-216ENST00000445676 ADAMTS13Q76LX8 1427 aa23.16■■□□□ 1.3
UBE2F-216ENST00000445676 ANKRD50Q9ULJ7 1429 aa23.16■■□□□ 1.3
UBE2F-216ENST00000445676 PPP1R15AO75807 674 aaPredicted RBP23.15■■□□□ 1.3
UBE2F-216ENST00000445676 UNC13BO14795 1591 aa23.14■■□□□ 1.3
UBE2F-216ENST00000445676 SPATA31A6Q5VVP1 1343 aa23.14■■□□□ 1.3
UBE2F-216ENST00000445676 E9PCH4 1651 aa23.14■■□□□ 1.29
UBE2F-216ENST00000445676 APLP2Q06481 763 aa23.13■■□□□ 1.29
UBE2F-216ENST00000445676 TBX22Q9Y458 520 aa23.13■■□□□ 1.29
UBE2F-216ENST00000445676 HDGFP51858 240 aaKnown RBP23.09■■□□□ 1.29
UBE2F-216ENST00000445676 MEX3CQ5U5Q3 659 aaKnown RBP23.09■■□□□ 1.29
UBE2F-216ENST00000445676 C14orf37Q86TY3 774 aa23.09■■□□□ 1.29
UBE2F-216ENST00000445676 UPF1Q92900 1129 aaKnown RBP eCLIP23.09■■□□□ 1.29
UBE2F-216ENST00000445676 ZNF772Q68DY9 489 aaPredicted RBP23.08■■□□□ 1.29
UBE2F-216ENST00000445676 PIK3R4Q99570 1358 aa23.07■■□□□ 1.28
UBE2F-216ENST00000445676 NUTM2DQ5VT03 806 aaPredicted RBP23.07■■□□□ 1.28
UBE2F-216ENST00000445676 CADPS2Q86UW7 1296 aa23.07■■□□□ 1.28
UBE2F-216ENST00000445676 TRIM52Q96A61 297 aa23.07■■□□□ 1.28
UBE2F-216ENST00000445676 TRPM2O94759 1503 aa23.07■■□□□ 1.28
UBE2F-216ENST00000445676 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.06■■□□□ 1.28
UBE2F-216ENST00000445676 C19orf44Q9H6X5 657 aa23.06■■□□□ 1.28
UBE2F-216ENST00000445676 IQGAP3Q86VI3 1631 aa23.05■■□□□ 1.28
UBE2F-216ENST00000445676 CHGAP10645 457 aaKnown RBP23.05■■□□□ 1.28
UBE2F-216ENST00000445676 PTPRUQ92729 1446 aa23.05■■□□□ 1.28
UBE2F-216ENST00000445676 ATF3P18847 181 aa23.04■■□□□ 1.28
UBE2F-216ENST00000445676 XRN1Q8IZH2 1706 aaKnown RBP23.04■■□□□ 1.28
UBE2F-216ENST00000445676 NHSL1Q5SYE7 1610 aa23.04■■□□□ 1.28
UBE2F-216ENST00000445676 NRXN3Q9Y4C0 1643 aa23.04■■□□□ 1.28
UBE2F-216ENST00000445676 FAM50AQ14320 339 aaKnown RBP23.03■■□□□ 1.28
UBE2F-216ENST00000445676 BRINP3Q76B58 766 aa23.02■■□□□ 1.28
UBE2F-216ENST00000445676 ASXL1Q8IXJ9 1541 aa23.02■■□□□ 1.28
UBE2F-216ENST00000445676 CDK12Q9NYV4 1490 aaPredicted RBP23.01■■□□□ 1.27
UBE2F-216ENST00000445676 DCCP43146 1447 aa23■■□□□ 1.27
UBE2F-216ENST00000445676 RXRBP28702 533 aa22.98■■□□□ 1.27
UBE2F-216ENST00000445676 AMOTL2Q9Y2J4 779 aa22.98■■□□□ 1.27
UBE2F-216ENST00000445676 NUTM2BA6NNL0 878 aaPredicted RBP22.97■■□□□ 1.27
UBE2F-216ENST00000445676 NUTM2EB1AL46 878 aaPredicted RBP22.97■■□□□ 1.27
UBE2F-216ENST00000445676 NUTM2AQ8IVF1 878 aaPredicted RBP22.97■■□□□ 1.27
UBE2F-216ENST00000445676 SETD5Q9C0A6 1442 aa22.97■■□□□ 1.27
UBE2F-216ENST00000445676 SETBP1Q9Y6X0 1596 aa22.97■■□□□ 1.27
UBE2F-216ENST00000445676 MST1RQ04912 1400 aa22.96■■□□□ 1.27
UBE2F-216ENST00000445676 AFF2P51816 1311 aa22.95■■□□□ 1.26
UBE2F-216ENST00000445676 SPHKAPQ2M3C7 1700 aa22.94■■□□□ 1.26
UBE2F-216ENST00000445676 NALCNQ8IZF0 1738 aa22.93■■□□□ 1.26
UBE2F-216ENST00000445676 RGS12O14924 1447 aa22.91■■□□□ 1.26
UBE2F-216ENST00000445676 ROCK1Q13464 1354 aa22.9■■□□□ 1.26
UBE2F-216ENST00000445676 SRCAPQ6ZRS2 3230 aa22.88■■□□□ 1.25
UBE2F-216ENST00000445676 PNPLA6Q8IY17 1366 aa22.88■■□□□ 1.25
UBE2F-216ENST00000445676 ADGRL3Q9HAR2 1447 aa22.87■■□□□ 1.25
UBE2F-216ENST00000445676 NUP155O75694 1391 aa22.87■■□□□ 1.25
UBE2F-216ENST00000445676 METP08581 1390 aa22.87■■□□□ 1.25
UBE2F-216ENST00000445676 DDX17Q92841 729 aaKnown RBP22.85■■□□□ 1.25
UBE2F-216ENST00000445676 LAMC1P11047 1609 aa22.84■■□□□ 1.25
UBE2F-216ENST00000445676 LRRC59Q96AG4 307 aaKnown RBP22.84■■□□□ 1.25
UBE2F-216ENST00000445676 C8orf37Q96NL8 207 aa22.84■■□□□ 1.25
UBE2F-216ENST00000445676 NEXMIFQ5QGS0 1516 aa22.82■■□□□ 1.24
UBE2F-216ENST00000445676 RBM6P78332 1123 aaKnown RBP22.81■■□□□ 1.24
UBE2F-216ENST00000445676 QTRT2Q9H974 415 aaKnown RBP22.81■■□□□ 1.24
UBE2F-216ENST00000445676 CLTCL1P53675 1640 aa22.81■■□□□ 1.24
UBE2F-216ENST00000445676 C1orf167Q5SNV9 1468 aa22.78■■□□□ 1.24
UBE2F-216ENST00000445676 KIF1BO60333 1816 aa22.78■■□□□ 1.24
UBE2F-216ENST00000445676 ZNF326Q5BKZ1 582 aaKnown RBP22.77■■□□□ 1.24
UBE2F-216ENST00000445676 EP400Q96L91 3159 aa22.74■■□□□ 1.23
UBE2F-216ENST00000445676 ADAMTS2O95450 1211 aa22.73■■□□□ 1.23
UBE2F-216ENST00000445676 PTCH1Q13635 1447 aa22.73■■□□□ 1.23
UBE2F-216ENST00000445676 NGLY1Q96IV0 654 aa22.72■■□□□ 1.23
UBE2F-216ENST00000445676 COL22A1Q8NFW1 1626 aaPredicted RBP22.71■■□□□ 1.23
UBE2F-216ENST00000445676 ITGAEP38570 1179 aa22.7■■□□□ 1.22
UBE2F-216ENST00000445676 SOS2Q07890 1332 aaPredicted RBP22.7■■□□□ 1.22
UBE2F-216ENST00000445676 ATAD2Q6PL18 1390 aa22.7■■□□□ 1.22
UBE2F-216ENST00000445676 MARF1Q9Y4F3 1742 aaKnown RBP22.69■■□□□ 1.22
UBE2F-216ENST00000445676 ROBO2Q9HCK4 1378 aa22.68■■□□□ 1.22
UBE2F-216ENST00000445676 ORAI2Q96SN7 254 aa22.67■■□□□ 1.22
UBE2F-216ENST00000445676 ATRNO75882 1429 aa22.66■■□□□ 1.22
UBE2F-216ENST00000445676 PRAG1Q86YV5 1406 aa22.66■■□□□ 1.22
UBE2F-216ENST00000445676 USP21Q9UK80 565 aa22.66■■□□□ 1.22
UBE2F-216ENST00000445676 TRPC5Q9UL62 973 aaPredicted RBP22.64■■□□□ 1.21
UBE2F-216ENST00000445676 PPLO60437 1756 aa22.63■■□□□ 1.21
UBE2F-216ENST00000445676 MYOM2P54296 1465 aa22.63■■□□□ 1.21
UBE2F-216ENST00000445676 FNBP4Q8N3X1 1017 aaPredicted RBP22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms