RNA–Protein interactions for RNA: ENST00000444997.1

PDCD4-203, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 819 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-203ENST00000444997 TRIM52Q96A61 297 aa26.18■■□□□ 1.78
PDCD4-203ENST00000444997 TMEM131LA2VDJ0 1609 aa26.17■■□□□ 1.78
PDCD4-203ENST00000444997 HFM1A2PYH4 1435 aa26.17■■□□□ 1.78
PDCD4-203ENST00000444997 ZFYVE9O95405 1425 aa26.17■■□□□ 1.78
PDCD4-203ENST00000444997 KCNA6P17658 529 aa26.17■■□□□ 1.78
PDCD4-203ENST00000444997 STRCP1A6NGW2 1772 aa26.16■■□□□ 1.78
PDCD4-203ENST00000444997 PLEKHG1Q9ULL1 1385 aa26.16■■□□□ 1.78
PDCD4-203ENST00000444997 SENP3Q9H4L4 574 aaPredicted RBP26.14■■□□□ 1.78
PDCD4-203ENST00000444997 NUTM2DQ5VT03 806 aaPredicted RBP26.1■■□□□ 1.77
PDCD4-203ENST00000444997 PROSER2Q86WR7 435 aaPredicted RBP26.1■■□□□ 1.77
PDCD4-203ENST00000444997 MYO5BQ9ULV0 1848 aa26.09■■□□□ 1.77
PDCD4-203ENST00000444997 ZNF326Q5BKZ1 582 aaKnown RBP26.08■■□□□ 1.77
PDCD4-203ENST00000444997 TBX22Q9Y458 520 aa26.08■■□□□ 1.77
PDCD4-203ENST00000444997 DISP3Q9P2K9 1392 aa26.07■■□□□ 1.76
PDCD4-203ENST00000444997 HSPA1LP34931 641 aa26.07■■□□□ 1.76
PDCD4-203ENST00000444997 SLC4A1APQ9BWU0 796 aaKnown RBP26.07■■□□□ 1.76
PDCD4-203ENST00000444997 SPHKAPQ2M3C7 1700 aa26.06■■□□□ 1.76
PDCD4-203ENST00000444997 TMEM94Q12767 1356 aa26.06■■□□□ 1.76
PDCD4-203ENST00000444997 NKTRP30414 1462 aaKnown RBP26.03■■□□□ 1.76
PDCD4-203ENST00000444997 ALKQ9UM73 1620 aa26.01■■□□□ 1.75
PDCD4-203ENST00000444997 TRPM2O94759 1503 aa26■■□□□ 1.75
PDCD4-203ENST00000444997 NWD1Q149M9 1564 aa25.99■■□□□ 1.75
PDCD4-203ENST00000444997 RBM33Q96EV2 1170 aaKnown RBP25.99■■□□□ 1.75
PDCD4-203ENST00000444997 ADAMTS13Q76LX8 1427 aa25.97■■□□□ 1.75
PDCD4-203ENST00000444997 PIK3R4Q99570 1358 aa25.97■■□□□ 1.75
PDCD4-203ENST00000444997 DIP2AQ14689 1571 aa25.97■■□□□ 1.75
PDCD4-203ENST00000444997 ACIN1Q9UKV3 1341 aaKnown RBP25.96■■□□□ 1.75
PDCD4-203ENST00000444997 MSH6P52701 1360 aa25.95■■□□□ 1.75
PDCD4-203ENST00000444997 CLTCL1P53675 1640 aa25.95■■□□□ 1.74
PDCD4-203ENST00000444997 XIRP1Q702N8 1843 aaKnown RBP25.94■■□□□ 1.74
PDCD4-203ENST00000444997 C14orf37Q86TY3 774 aa25.92■■□□□ 1.74
PDCD4-203ENST00000444997 CHD2O14647 1828 aaKnown RBP25.91■■□□□ 1.74
PDCD4-203ENST00000444997 AMOTL2Q9Y2J4 779 aa25.9■■□□□ 1.74
PDCD4-203ENST00000444997 FAM135BQ49AJ0 1406 aa25.89■■□□□ 1.74
PDCD4-203ENST00000444997 NCOA3Q9Y6Q9 1424 aa25.89■■□□□ 1.74
PDCD4-203ENST00000444997 MPHOSPH9Q99550 1183 aa25.89■■□□□ 1.74
PDCD4-203ENST00000444997 VGFO15240 615 aaPredicted RBP25.88■■□□□ 1.73
PDCD4-203ENST00000444997 FOXD1Q16676 465 aa25.88■■□□□ 1.73
PDCD4-203ENST00000444997 RPGRIP1LQ68CZ1 1315 aa25.88■■□□□ 1.73
PDCD4-203ENST00000444997 KIF1BO60333 1816 aa25.87■■□□□ 1.73
PDCD4-203ENST00000444997 SETD5Q9C0A6 1442 aa25.87■■□□□ 1.73
PDCD4-203ENST00000444997 SETBP1Q9Y6X0 1596 aa25.86■■□□□ 1.73
PDCD4-203ENST00000444997 NEXMIFQ5QGS0 1516 aa25.85■■□□□ 1.73
PDCD4-203ENST00000444997 SLAIN2Q9P270 581 aa25.85■■□□□ 1.73
PDCD4-203ENST00000444997 C19orf44Q9H6X5 657 aa25.83■■□□□ 1.73
PDCD4-203ENST00000444997 CCDC144AA2RUR9 1427 aa25.82■■□□□ 1.72
PDCD4-203ENST00000444997 PTPRUQ92729 1446 aa25.82■■□□□ 1.72
PDCD4-203ENST00000444997 ATF3P18847 181 aa25.81■■□□□ 1.72
PDCD4-203ENST00000444997 CADPS2Q86UW7 1296 aa25.81■■□□□ 1.72
PDCD4-203ENST00000444997 NRXN3Q9Y4C0 1643 aa25.8■■□□□ 1.72
PDCD4-203ENST00000444997 METP08581 1390 aa25.8■■□□□ 1.72
PDCD4-203ENST00000444997 ILDR2Q71H61 639 aa25.79■■□□□ 1.72
PDCD4-203ENST00000444997 MED1Q15648 1581 aaPredicted RBP25.76■■□□□ 1.71
PDCD4-203ENST00000444997 ROBO1Q9Y6N7 1651 aa25.75■■□□□ 1.71
PDCD4-203ENST00000444997 RAB3GAP2Q9H2M9 1393 aa25.75■■□□□ 1.71
PDCD4-203ENST00000444997 RGL3Q3MIN7 710 aa25.75■■□□□ 1.71
PDCD4-203ENST00000444997 PHF23Q9BUL5 403 aaPredicted RBP25.74■■□□□ 1.71
PDCD4-203ENST00000444997 XRN1Q8IZH2 1706 aaKnown RBP25.71■■□□□ 1.71
PDCD4-203ENST00000444997 ANKRD30BQ9BXX2 1392 aa25.69■■□□□ 1.7
PDCD4-203ENST00000444997 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.68■■□□□ 1.7
PDCD4-203ENST00000444997 DCCP43146 1447 aa25.68■■□□□ 1.7
PDCD4-203ENST00000444997 SPATA31E1Q6ZUB1 1445 aa25.67■■□□□ 1.7
PDCD4-203ENST00000444997 PPLO60437 1756 aa25.66■■□□□ 1.7
PDCD4-203ENST00000444997 ADGRF5Q8IZF2 1346 aa25.64■■□□□ 1.7
PDCD4-203ENST00000444997 SOCS7O14512 581 aa25.63■■□□□ 1.69
PDCD4-203ENST00000444997 HRCP23327 699 aa25.63■■□□□ 1.69
PDCD4-203ENST00000444997 PTCH1Q13635 1447 aa25.62■■□□□ 1.69
PDCD4-203ENST00000444997 ADGRL3Q9HAR2 1447 aa25.62■■□□□ 1.69
PDCD4-203ENST00000444997 PHLPP1O60346 1717 aa25.6■■□□□ 1.69
PDCD4-203ENST00000444997 BRINP3Q76B58 766 aa25.6■■□□□ 1.69
PDCD4-203ENST00000444997 JCADQ9P266 1359 aa25.59■■□□□ 1.69
PDCD4-203ENST00000444997 ROBO2Q9HCK4 1378 aa25.58■■□□□ 1.69
PDCD4-203ENST00000444997 SETD1AO15047 1707 aaKnown RBP25.57■■□□□ 1.68
PDCD4-203ENST00000444997 MST1RQ04912 1400 aa25.56■■□□□ 1.68
PDCD4-203ENST00000444997 PRAG1Q86YV5 1406 aa25.56■■□□□ 1.68
PDCD4-203ENST00000444997 STK26Q9P289 416 aa25.54■■□□□ 1.68
PDCD4-203ENST00000444997 AHDC1Q5TGY3 1603 aaPredicted RBP25.53■■□□□ 1.68
PDCD4-203ENST00000444997 PIK3C2GO75747 1445 aa25.53■■□□□ 1.68
PDCD4-203ENST00000444997 IFT172Q9UG01 1749 aa25.51■■□□□ 1.68
PDCD4-203ENST00000444997 TMEM132EQ6IEE7 984 aa25.51■■□□□ 1.67
PDCD4-203ENST00000444997 ASXL1Q8IXJ9 1541 aa25.51■■□□□ 1.67
PDCD4-203ENST00000444997 COL16A1Q07092 1604 aaPredicted RBP25.51■■□□□ 1.67
PDCD4-203ENST00000444997 LRPPRCP42704 1394 aaKnown RBP25.5■■□□□ 1.67
PDCD4-203ENST00000444997 NALCNQ8IZF0 1738 aa25.5■■□□□ 1.67
PDCD4-203ENST00000444997 SPATA31A6Q5VVP1 1343 aa25.49■■□□□ 1.67
PDCD4-203ENST00000444997 C14orf93Q9H972 538 aaKnown RBP25.48■■□□□ 1.67
PDCD4-203ENST00000444997 C1orf167Q5SNV9 1468 aa25.47■■□□□ 1.67
PDCD4-203ENST00000444997 ABCC11Q96J66 1382 aa25.47■■□□□ 1.67
PDCD4-203ENST00000444997 MYOM2P54296 1465 aa25.47■■□□□ 1.67
PDCD4-203ENST00000444997 MEX3CQ5U5Q3 659 aaKnown RBP25.45■■□□□ 1.66
PDCD4-203ENST00000444997 WAPLQ7Z5K2 1190 aa25.45■■□□□ 1.66
PDCD4-203ENST00000444997 LRRC59Q96AG4 307 aaKnown RBP25.45■■□□□ 1.66
PDCD4-203ENST00000444997 RGS17Q9UGC6 210 aaPredicted RBP25.45■■□□□ 1.66
PDCD4-203ENST00000444997 TECPR2O15040 1411 aa25.45■■□□□ 1.66
PDCD4-203ENST00000444997 CFAP70Q5T0N1 1121 aa25.44■■□□□ 1.66
PDCD4-203ENST00000444997 DHX57Q6P158 1386 aaKnown RBP25.44■■□□□ 1.66
PDCD4-203ENST00000444997 NRXN1Q9ULB1 1477 aa25.43■■□□□ 1.66
PDCD4-203ENST00000444997 YTHDC2Q9H6S0 1430 aaKnown RBP25.43■■□□□ 1.66
PDCD4-203ENST00000444997 STAC3Q96MF2 364 aa25.42■■□□□ 1.66
PDCD4-203ENST00000444997 DCAF11Q8TEB1 546 aa25.41■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms