RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 MROH2AA6NES4 1674 aa18.69■□□□□ 0.58
RBM39-216ENST00000444878 IFT172Q9UG01 1749 aa18.69■□□□□ 0.58
RBM39-216ENST00000444878 DIP2BQ9P265 1576 aa18.69■□□□□ 0.58
RBM39-216ENST00000444878 DISP3Q9P2K9 1392 aa18.68■□□□□ 0.58
RBM39-216ENST00000444878 TSPOAP1O95153 1857 aa18.68■□□□□ 0.58
RBM39-216ENST00000444878 ABCC3O15438 1527 aa18.68■□□□□ 0.58
RBM39-216ENST00000444878 MYOM2P54296 1465 aa18.67■□□□□ 0.58
RBM39-216ENST00000444878 CAMSAP1Q5T5Y3 1602 aa18.67■□□□□ 0.58
RBM39-216ENST00000444878 SCAF11Q99590 1463 aaKnown RBP18.66■□□□□ 0.58
RBM39-216ENST00000444878 KTN1Q86UP2 1357 aaKnown RBP18.65■□□□□ 0.58
RBM39-216ENST00000444878 YEATS2Q9ULM3 1422 aa18.64■□□□□ 0.57
RBM39-216ENST00000444878 CHGAP10645 457 aaKnown RBP18.64■□□□□ 0.57
RBM39-216ENST00000444878 RALBP1Q15311 655 aa18.64■□□□□ 0.57
RBM39-216ENST00000444878 ADGRB3O60242 1522 aa18.64■□□□□ 0.57
RBM39-216ENST00000444878 ZC3H13Q5T200 1668 aaKnown RBP18.62■□□□□ 0.57
RBM39-216ENST00000444878 ADGRF5Q8IZF2 1346 aa18.62■□□□□ 0.57
RBM39-216ENST00000444878 EIF3AQ14152 1382 aaKnown RBP18.62■□□□□ 0.57
RBM39-216ENST00000444878 NEFLP07196 543 aa18.61■□□□□ 0.57
RBM39-216ENST00000444878 TMC1Q8TDI8 760 aa18.61■□□□□ 0.57
RBM39-216ENST00000444878 SIGLEC1Q9BZZ2 1709 aa18.6■□□□□ 0.57
RBM39-216ENST00000444878 PPLO60437 1756 aa18.6■□□□□ 0.57
RBM39-216ENST00000444878 ZMYM4Q5VZL5 1548 aa18.6■□□□□ 0.57
RBM39-216ENST00000444878 CFAP70Q5T0N1 1121 aa18.6■□□□□ 0.57
RBM39-216ENST00000444878 MYBBP1AQ9BQG0 1328 aaKnown RBP18.6■□□□□ 0.57
RBM39-216ENST00000444878 PER1O15534 1290 aaPredicted RBP18.59■□□□□ 0.57
RBM39-216ENST00000444878 FKBP8Q14318 412 aa18.59■□□□□ 0.57
RBM39-216ENST00000444878 NOS1P29475 1434 aa18.59■□□□□ 0.57
RBM39-216ENST00000444878 ZBED9Q6R2W3 1325 aa18.59■□□□□ 0.57
RBM39-216ENST00000444878 NRXN1Q9ULB1 1477 aa18.58■□□□□ 0.57
RBM39-216ENST00000444878 CDCA8Q53HL2 280 aa18.58■□□□□ 0.57
RBM39-216ENST00000444878 PANK3Q9H999 370 aa18.58■□□□□ 0.56
RBM39-216ENST00000444878 BRD4O60885 1362 aaPredicted RBP18.57■□□□□ 0.56
RBM39-216ENST00000444878 ARHGAP31Q2M1Z3 1444 aa18.56■□□□□ 0.56
RBM39-216ENST00000444878 PARD3Q8TEW0 1356 aa18.55■□□□□ 0.56
RBM39-216ENST00000444878 PIK3C2BO00750 1634 aa18.55■□□□□ 0.56
RBM39-216ENST00000444878 PNISRQ8TF01 805 aaKnown RBP18.55■□□□□ 0.56
RBM39-216ENST00000444878 PHF23Q9BUL5 403 aaPredicted RBP18.55■□□□□ 0.56
RBM39-216ENST00000444878 RPGRIP1LQ68CZ1 1315 aa18.54■□□□□ 0.56
RBM39-216ENST00000444878 SYNMO15061 1565 aa18.54■□□□□ 0.56
RBM39-216ENST00000444878 NLRP13Q86W25 1043 aa18.52■□□□□ 0.56
RBM39-216ENST00000444878 SETBP1Q9Y6X0 1596 aa18.52■□□□□ 0.56
RBM39-216ENST00000444878 KDM5AP29375 1690 aaKnown RBP18.52■□□□□ 0.56
RBM39-216ENST00000444878 PIK3C2GO75747 1445 aa18.51■□□□□ 0.55
RBM39-216ENST00000444878 CC2D1BQ5T0F9 858 aaKnown RBP18.51■□□□□ 0.55
RBM39-216ENST00000444878 KIF13AQ9H1H9 1805 aa18.51■□□□□ 0.55
RBM39-216ENST00000444878 PREX1Q8TCU6 1659 aa18.5■□□□□ 0.55
RBM39-216ENST00000444878 BCANQ96GW7 911 aa18.49■□□□□ 0.55
RBM39-216ENST00000444878 C14orf93Q9H972 538 aaKnown RBP18.49■□□□□ 0.55
RBM39-216ENST00000444878 SLC52A1Q9NWF4 448 aa18.49■□□□□ 0.55
RBM39-216ENST00000444878 MYO3AQ8NEV4 1616 aa18.48■□□□□ 0.55
RBM39-216ENST00000444878 MYOM1P52179 1685 aa18.48■□□□□ 0.55
RBM39-216ENST00000444878 REREQ9P2R6 1566 aa18.48■□□□□ 0.55
RBM39-216ENST00000444878 KNSTRNQ9Y448 316 aa18.47■□□□□ 0.55
RBM39-216ENST00000444878 MYO5BQ9ULV0 1848 aa18.47■□□□□ 0.55
RBM39-216ENST00000444878 LRPPRCP42704 1394 aaKnown RBP18.47■□□□□ 0.55
RBM39-216ENST00000444878 IDI1Q13907 227 aa18.47■□□□□ 0.55
RBM39-216ENST00000444878 VGFO15240 615 aaPredicted RBP18.46■□□□□ 0.55
RBM39-216ENST00000444878 NEXMIFQ5QGS0 1516 aa18.46■□□□□ 0.55
RBM39-216ENST00000444878 ERVK-7P63135 1459 aa18.45■□□□□ 0.54
RBM39-216ENST00000444878 AGLP35573 1532 aa18.45■□□□□ 0.54
RBM39-216ENST00000444878 CENPJQ9HC77 1338 aaPredicted RBP18.44■□□□□ 0.54
RBM39-216ENST00000444878 SBNO2Q9Y2G9 1366 aa18.44■□□□□ 0.54
RBM39-216ENST00000444878 ADGRB1O14514 1584 aa18.44■□□□□ 0.54
RBM39-216ENST00000444878 NUTM2DQ5VT03 806 aaPredicted RBP18.43■□□□□ 0.54
RBM39-216ENST00000444878 TRAK1Q9UPV9 953 aa18.43■□□□□ 0.54
RBM39-216ENST00000444878 PPP6R1Q9UPN7 881 aa18.42■□□□□ 0.54
RBM39-216ENST00000444878 QRICH2Q9H0J4 1663 aa18.42■□□□□ 0.54
RBM39-216ENST00000444878 TMEM132EQ6IEE7 984 aa18.41■□□□□ 0.54
RBM39-216ENST00000444878 TMEM131LA2VDJ0 1609 aa18.41■□□□□ 0.54
RBM39-216ENST00000444878 ASXL1Q8IXJ9 1541 aa18.41■□□□□ 0.54
RBM39-216ENST00000444878 CLTCQ00610 1675 aaKnown RBP18.4■□□□□ 0.54
RBM39-216ENST00000444878 FBXO31Q5XUX0 539 aaPredicted RBP18.39■□□□□ 0.53
RBM39-216ENST00000444878 ZFYVE9O95405 1425 aa18.38■□□□□ 0.53
RBM39-216ENST00000444878 SMG6Q86US8 1419 aaKnown RBP18.38■□□□□ 0.53
RBM39-216ENST00000444878 ARHGEF40Q8TER5 1519 aa18.38■□□□□ 0.53
RBM39-216ENST00000444878 SENP3-EIF4A1A0A087X0R7 540 aa18.37■□□□□ 0.53
RBM39-216ENST00000444878 ARHGEF28Q8N1W1 1705 aaKnown RBP18.36■□□□□ 0.53
RBM39-216ENST00000444878 NPC1L1Q9UHC9 1359 aa18.36■□□□□ 0.53
RBM39-216ENST00000444878 NUDCQ9Y266 331 aa18.36■□□□□ 0.53
RBM39-216ENST00000444878 IRX6P78412 446 aaPredicted RBP18.35■□□□□ 0.53
RBM39-216ENST00000444878 MLECQ14165 292 aa18.35■□□□□ 0.53
RBM39-216ENST00000444878 STAG3Q9UJ98 1225 aa18.34■□□□□ 0.53
RBM39-216ENST00000444878 PPP2R1AP30153 589 aa18.34■□□□□ 0.53
RBM39-216ENST00000444878 ERICH6BQ5W0A0 696 aa18.32■□□□□ 0.52
RBM39-216ENST00000444878 INSRP06213 1382 aa18.32■□□□□ 0.52
RBM39-216ENST00000444878 TULP1O00294 542 aaPredicted RBP18.31■□□□□ 0.52
RBM39-216ENST00000444878 SPATA31D1Q6ZQQ2 1576 aa18.3■□□□□ 0.52
RBM39-216ENST00000444878 CARD14Q9BXL6 1004 aa18.29■□□□□ 0.52
RBM39-216ENST00000444878 SENP3Q9H4L4 574 aaPredicted RBP18.29■□□□□ 0.52
RBM39-216ENST00000444878 ESF1Q9H501 851 aaKnown RBP18.29■□□□□ 0.52
RBM39-216ENST00000444878 BLMP54132 1417 aaPredicted RBP18.28■□□□□ 0.52
RBM39-216ENST00000444878 TAOK2Q9UL54 1235 aa18.28■□□□□ 0.52
RBM39-216ENST00000444878 SALL2Q9Y467 1007 aaPredicted RBP18.28■□□□□ 0.52
RBM39-216ENST00000444878 EVC2Q86UK5 1308 aa18.28■□□□□ 0.52
RBM39-216ENST00000444878 STK26Q9P289 416 aa18.27■□□□□ 0.52
RBM39-216ENST00000444878 WDR43Q15061 677 aaKnown RBP eCLIP18.26■□□□□ 0.513e-7■■□□□ 11.8
RBM39-216ENST00000444878 SLC12A5Q9H2X9 1139 aa18.26■□□□□ 0.51
RBM39-216ENST00000444878 PUS7Q96PZ0 661 aaKnown RBP18.25■□□□□ 0.51
RBM39-216ENST00000444878 PDE3BQ13370 1112 aa18.25■□□□□ 0.51
RBM39-216ENST00000444878 ADAMTS8Q9UP79 889 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms