RNA–Protein interactions for RNA: ENST00000444865.1

LINC00460-203, long intergenic non-protein coding RNA 460, humanhuman

TSL 1 (best) BASIC

Gene LINC00460, Length 739 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00460-203ENST00000444865 IDI1Q13907 227 aa12.28□□□□□ -0.44
LINC00460-203ENST00000444865 TET3O43151 1660 aa12.28□□□□□ -0.44
LINC00460-203ENST00000444865 ANKRD30AQ9BXX3 1397 aa12.28□□□□□ -0.44
LINC00460-203ENST00000444865 NOS1P29475 1434 aa12.28□□□□□ -0.44
LINC00460-203ENST00000444865 ADGRB3O60242 1522 aa12.27□□□□□ -0.44
LINC00460-203ENST00000444865 SPINK5Q9NQ38 1064 aaPredicted RBP12.27□□□□□ -0.45
LINC00460-203ENST00000444865 CHIC2Q9UKJ5 165 aa12.27□□□□□ -0.45
LINC00460-203ENST00000444865 CAPN15O75808 1086 aa12.26□□□□□ -0.45
LINC00460-203ENST00000444865 STAG3Q9UJ98 1225 aa12.26□□□□□ -0.45
LINC00460-203ENST00000444865 TMEM94Q12767 1356 aa12.26□□□□□ -0.45
LINC00460-203ENST00000444865 FAM135BQ49AJ0 1406 aa12.26□□□□□ -0.45
LINC00460-203ENST00000444865 ADGRL2O95490 1459 aa12.26□□□□□ -0.45
LINC00460-203ENST00000444865 NWD1Q149M9 1564 aa12.26□□□□□ -0.45
LINC00460-203ENST00000444865 APLP2Q06481 763 aa12.25□□□□□ -0.45
LINC00460-203ENST00000444865 RGS17Q9UGC6 210 aaPredicted RBP12.25□□□□□ -0.45
LINC00460-203ENST00000444865 KCNA6P17658 529 aa12.24□□□□□ -0.45
LINC00460-203ENST00000444865 SLC26A8Q96RN1 970 aa12.24□□□□□ -0.45
LINC00460-203ENST00000444865 ROBO1Q9Y6N7 1651 aa12.23□□□□□ -0.45
LINC00460-203ENST00000444865 RBM33Q96EV2 1170 aaKnown RBP12.23□□□□□ -0.45
LINC00460-203ENST00000444865 NKTRP30414 1462 aaKnown RBP12.22□□□□□ -0.45
LINC00460-203ENST00000444865 ZFYVE9O95405 1425 aa12.21□□□□□ -0.45
LINC00460-203ENST00000444865 RPRD2Q5VT52 1461 aaKnown RBP12.21□□□□□ -0.46
LINC00460-203ENST00000444865 PROSER2Q86WR7 435 aaPredicted RBP12.2□□□□□ -0.46
LINC00460-203ENST00000444865 SLC52A1Q9NWF4 448 aa12.2□□□□□ -0.46
LINC00460-203ENST00000444865 ANKRD50Q9ULJ7 1429 aa12.2□□□□□ -0.46
LINC00460-203ENST00000444865 GCC2Q8IWJ2 1684 aa12.19□□□□□ -0.46
LINC00460-203ENST00000444865 MYO5BQ9ULV0 1848 aa12.19□□□□□ -0.46
LINC00460-203ENST00000444865 TMEM131LA2VDJ0 1609 aa12.19□□□□□ -0.46
LINC00460-203ENST00000444865 PLEKHG1Q9ULL1 1385 aa12.18□□□□□ -0.46
LINC00460-203ENST00000444865 RIMS2Q9UQ26 1411 aa12.18□□□□□ -0.46
LINC00460-203ENST00000444865 UNC13BO14795 1591 aa12.18□□□□□ -0.46
LINC00460-203ENST00000444865 CHD2O14647 1828 aaKnown RBP12.17□□□□□ -0.46
LINC00460-203ENST00000444865 FAM50AQ14320 339 aaKnown RBP12.17□□□□□ -0.46
LINC00460-203ENST00000444865 POTEAQ6S8J7 498 aa12.17□□□□□ -0.46
LINC00460-203ENST00000444865 MSH6P52701 1360 aa12.17□□□□□ -0.46
LINC00460-203ENST00000444865 PHLPP1O60346 1717 aa12.15□□□□□ -0.46
LINC00460-203ENST00000444865 BCANQ96GW7 911 aa12.15□□□□□ -0.46
LINC00460-203ENST00000444865 E9PCH4 1651 aa12.14□□□□□ -0.47
LINC00460-203ENST00000444865 ADAMTS13Q76LX8 1427 aa12.13□□□□□ -0.47
LINC00460-203ENST00000444865 COL16A1Q07092 1604 aaPredicted RBP12.13□□□□□ -0.47
LINC00460-203ENST00000444865 PPP1R15AO75807 674 aaPredicted RBP12.13□□□□□ -0.47
LINC00460-203ENST00000444865 SLAIN2Q9P270 581 aa12.13□□□□□ -0.47
LINC00460-203ENST00000444865 IQGAP3Q86VI3 1631 aa12.12□□□□□ -0.47
LINC00460-203ENST00000444865 TBX22Q9Y458 520 aa12.12□□□□□ -0.47
LINC00460-203ENST00000444865 JCADQ9P266 1359 aa12.12□□□□□ -0.47
LINC00460-203ENST00000444865 DIP2AQ14689 1571 aa12.11□□□□□ -0.47
LINC00460-203ENST00000444865 SETD1AO15047 1707 aaKnown RBP12.11□□□□□ -0.47
LINC00460-203ENST00000444865 NCOA3Q9Y6Q9 1424 aa12.11□□□□□ -0.47
LINC00460-203ENST00000444865 ROCK1Q13464 1354 aa12.1□□□□□ -0.47
LINC00460-203ENST00000444865 CHGAP10645 457 aaKnown RBP12.1□□□□□ -0.47
LINC00460-203ENST00000444865 HDGFP51858 240 aaKnown RBP12.1□□□□□ -0.47
LINC00460-203ENST00000444865 NUTM2DQ5VT03 806 aaPredicted RBP12.1□□□□□ -0.47
LINC00460-203ENST00000444865 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.09□□□□□ -0.47
LINC00460-203ENST00000444865 LRP6O75581 1613 aa12.09□□□□□ -0.47
LINC00460-203ENST00000444865 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.09□□□□□ -0.47
LINC00460-203ENST00000444865 AHDC1Q5TGY3 1603 aaPredicted RBP12.08□□□□□ -0.48
LINC00460-203ENST00000444865 PIK3R4Q99570 1358 aa12.08□□□□□ -0.48
LINC00460-203ENST00000444865 PTPRUQ92729 1446 aa12.08□□□□□ -0.48
LINC00460-203ENST00000444865 TRPM2O94759 1503 aa12.07□□□□□ -0.48
LINC00460-203ENST00000444865 NRXN3Q9Y4C0 1643 aa12.07□□□□□ -0.48
LINC00460-203ENST00000444865 C14orf37Q86TY3 774 aa12.06□□□□□ -0.48
LINC00460-203ENST00000444865 SHPRHQ149N8 1683 aa12.06□□□□□ -0.48
LINC00460-203ENST00000444865 NUP155O75694 1391 aa12.05□□□□□ -0.48
LINC00460-203ENST00000444865 CADPS2Q86UW7 1296 aa12.05□□□□□ -0.48
LINC00460-203ENST00000444865 C19orf44Q9H6X5 657 aa12.05□□□□□ -0.48
LINC00460-203ENST00000444865 XRN1Q8IZH2 1706 aaKnown RBP12.05□□□□□ -0.48
LINC00460-203ENST00000444865 SPATA31A6Q5VVP1 1343 aa12.05□□□□□ -0.48
LINC00460-203ENST00000444865 AMOTL2Q9Y2J4 779 aa12.04□□□□□ -0.48
LINC00460-203ENST00000444865 SETBP1Q9Y6X0 1596 aa12.04□□□□□ -0.48
LINC00460-203ENST00000444865 ATF3P18847 181 aa12.03□□□□□ -0.48
LINC00460-203ENST00000444865 SPHKAPQ2M3C7 1700 aa12.03□□□□□ -0.48
LINC00460-203ENST00000444865 BRINP3Q76B58 766 aa12.02□□□□□ -0.49
LINC00460-203ENST00000444865 DCCP43146 1447 aa12.02□□□□□ -0.49
LINC00460-203ENST00000444865 ASXL1Q8IXJ9 1541 aa12.01□□□□□ -0.49
LINC00460-203ENST00000444865 ITGAEP38570 1179 aa12.01□□□□□ -0.49
LINC00460-203ENST00000444865 MST1RQ04912 1400 aa12.01□□□□□ -0.49
LINC00460-203ENST00000444865 MEX3CQ5U5Q3 659 aaKnown RBP12□□□□□ -0.49
LINC00460-203ENST00000444865 METP08581 1390 aa12□□□□□ -0.49
LINC00460-203ENST00000444865 CLTCL1P53675 1640 aa12□□□□□ -0.49
LINC00460-203ENST00000444865 NHSL1Q5SYE7 1610 aa12□□□□□ -0.49
LINC00460-203ENST00000444865 ZNF772Q68DY9 489 aaPredicted RBP11.99□□□□□ -0.49
LINC00460-203ENST00000444865 NEXMIFQ5QGS0 1516 aa11.99□□□□□ -0.49
LINC00460-203ENST00000444865 SETD5Q9C0A6 1442 aa11.98□□□□□ -0.49
LINC00460-203ENST00000444865 ZNF326Q5BKZ1 582 aaKnown RBP11.97□□□□□ -0.49
LINC00460-203ENST00000444865 TRIM52Q96A61 297 aa11.97□□□□□ -0.49
LINC00460-203ENST00000444865 NALCNQ8IZF0 1738 aa11.97□□□□□ -0.49
LINC00460-203ENST00000444865 ADGRL3Q9HAR2 1447 aa11.96□□□□□ -0.49
LINC00460-203ENST00000444865 NUTM2BA6NNL0 878 aaPredicted RBP11.96□□□□□ -0.49
LINC00460-203ENST00000444865 NUTM2EB1AL46 878 aaPredicted RBP11.96□□□□□ -0.49
LINC00460-203ENST00000444865 PPARGC1BQ86YN6 1023 aaKnown RBP11.96□□□□□ -0.49
LINC00460-203ENST00000444865 NUTM2AQ8IVF1 878 aaPredicted RBP11.96□□□□□ -0.49
LINC00460-203ENST00000444865 UPF1Q92900 1129 aaKnown RBP eCLIP11.96□□□□□ -0.49
LINC00460-203ENST00000444865 DDX17Q92841 729 aaKnown RBP11.94□□□□□ -0.5
LINC00460-203ENST00000444865 CDK12Q9NYV4 1490 aaPredicted RBP11.94□□□□□ -0.5
LINC00460-203ENST00000444865 PNPLA6Q8IY17 1366 aa11.93□□□□□ -0.5
LINC00460-203ENST00000444865 AFF2P51816 1311 aa11.93□□□□□ -0.5
LINC00460-203ENST00000444865 ABCB7O75027 752 aa11.93□□□□□ -0.5
LINC00460-203ENST00000444865 RXRBP28702 533 aa11.93□□□□□ -0.5
LINC00460-203ENST00000444865 SLC4A2P04920 1241 aa11.92□□□□□ -0.5
LINC00460-203ENST00000444865 KIF1BO60333 1816 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms