RNA–Protein interactions for RNA: ENST00000444172.6

CIRBP-203, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-203ENST00000444172 PPP1R15AO75807 674 aaPredicted RBP26.06■■□□□ 1.76
CIRBP-203ENST00000444172 NEUROD1Q13562 356 aa26.06■■□□□ 1.76
CIRBP-203ENST00000444172 SIN3AQ96ST3 1273 aa26.06■■□□□ 1.76
CIRBP-203ENST00000444172 POLR1AO95602 1720 aaPredicted RBP26.05■■□□□ 1.76
CIRBP-203ENST00000444172 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.04■■□□□ 1.76
CIRBP-203ENST00000444172 SENP3Q9H4L4 574 aaPredicted RBP26.03■■□□□ 1.76
CIRBP-203ENST00000444172 BCANQ96GW7 911 aa26.02■■□□□ 1.76
CIRBP-203ENST00000444172 SPATA31E1Q6ZUB1 1445 aa26.02■■□□□ 1.76
CIRBP-203ENST00000444172 SCAF11Q99590 1463 aaKnown RBP26.02■■□□□ 1.76
CIRBP-203ENST00000444172 ZFYVE9O95405 1425 aa26.01■■□□□ 1.75
CIRBP-203ENST00000444172 CCER1Q8TC90 406 aaPredicted RBP26.01■■□□□ 1.75
CIRBP-203ENST00000444172 DMRT2Q9Y5R5 561 aa26.01■■□□□ 1.75
CIRBP-203ENST00000444172 RPGRIP1LQ68CZ1 1315 aa26■■□□□ 1.75
CIRBP-203ENST00000444172 NEXMIFQ5QGS0 1516 aa25.98■■□□□ 1.75
CIRBP-203ENST00000444172 NEURL4Q96JN8 1562 aa25.97■■□□□ 1.75
CIRBP-203ENST00000444172 NPHP4O75161 1426 aaPredicted RBP25.97■■□□□ 1.75
CIRBP-203ENST00000444172 PPLO60437 1756 aa25.95■■□□□ 1.75
CIRBP-203ENST00000444172 VGFO15240 615 aaPredicted RBP25.95■■□□□ 1.74
CIRBP-203ENST00000444172 IQGAP1P46940 1657 aa25.94■■□□□ 1.74
CIRBP-203ENST00000444172 MED14O60244 1454 aa25.94■■□□□ 1.74
CIRBP-203ENST00000444172 KDM2AQ9Y2K7 1162 aa25.94■■□□□ 1.74
CIRBP-203ENST00000444172 DCAF11Q8TEB1 546 aa25.93■■□□□ 1.74
CIRBP-203ENST00000444172 PLEKHG1Q9ULL1 1385 aa25.91■■□□□ 1.74
CIRBP-203ENST00000444172 SLC26A8Q96RN1 970 aa25.9■■□□□ 1.74
CIRBP-203ENST00000444172 IFT172Q9UG01 1749 aa25.9■■□□□ 1.74
CIRBP-203ENST00000444172 ADGRF5Q8IZF2 1346 aa25.88■■□□□ 1.73
CIRBP-203ENST00000444172 CLSPNQ9HAW4 1339 aa25.88■■□□□ 1.73
CIRBP-203ENST00000444172 L3MBTL2Q969R5 705 aa25.85■■□□□ 1.73
CIRBP-203ENST00000444172 TONSLQ96HA7 1378 aa25.82■■□□□ 1.72
CIRBP-203ENST00000444172 STAC3Q96MF2 364 aa25.8■■□□□ 1.72
CIRBP-203ENST00000444172 TBX22Q9Y458 520 aa25.8■■□□□ 1.72
CIRBP-203ENST00000444172 ADAMTS13Q76LX8 1427 aa25.8■■□□□ 1.72
CIRBP-203ENST00000444172 MYOM2P54296 1465 aa25.79■■□□□ 1.72
CIRBP-203ENST00000444172 SETBP1Q9Y6X0 1596 aa25.78■■□□□ 1.72
CIRBP-203ENST00000444172 NRXN3Q9Y4C0 1643 aa25.78■■□□□ 1.72
CIRBP-203ENST00000444172 ZNF335Q9H4Z2 1342 aaPredicted RBP25.77■■□□□ 1.72
CIRBP-203ENST00000444172 ALKQ9UM73 1620 aa25.74■■□□□ 1.71
CIRBP-203ENST00000444172 DIP2AQ14689 1571 aa25.74■■□□□ 1.71
CIRBP-203ENST00000444172 PIK3C2GO75747 1445 aa25.74■■□□□ 1.71
CIRBP-203ENST00000444172 NRXN1Q9ULB1 1477 aa25.73■■□□□ 1.71
CIRBP-203ENST00000444172 CFAP70Q5T0N1 1121 aa25.73■■□□□ 1.71
CIRBP-203ENST00000444172 METP08581 1390 aa25.7■■□□□ 1.71
CIRBP-203ENST00000444172 KCNA6P17658 529 aa25.7■■□□□ 1.7
CIRBP-203ENST00000444172 C14orf93Q9H972 538 aaKnown RBP25.7■■□□□ 1.7
CIRBP-203ENST00000444172 TMEM132EQ6IEE7 984 aa25.68■■□□□ 1.7
CIRBP-203ENST00000444172 SETD1AO15047 1707 aaKnown RBP25.68■■□□□ 1.7
CIRBP-203ENST00000444172 CHD2O14647 1828 aaKnown RBP25.67■■□□□ 1.7
CIRBP-203ENST00000444172 PIK3R4Q99570 1358 aa25.67■■□□□ 1.7
CIRBP-203ENST00000444172 STRCP1A6NGW2 1772 aa25.67■■□□□ 1.7
CIRBP-203ENST00000444172 PRAG1Q86YV5 1406 aa25.66■■□□□ 1.7
CIRBP-203ENST00000444172 TIMELESSQ9UNS1 1208 aa25.66■■□□□ 1.7
CIRBP-203ENST00000444172 AMOTL2Q9Y2J4 779 aa25.66■■□□□ 1.7
CIRBP-203ENST00000444172 PTPRUQ92729 1446 aa25.64■■□□□ 1.7
CIRBP-203ENST00000444172 LAMC1P11047 1609 aa25.64■■□□□ 1.7
CIRBP-203ENST00000444172 STK26Q9P289 416 aa25.63■■□□□ 1.69
CIRBP-203ENST00000444172 NBPF8Q3BBV2 869 aa25.62■■□□□ 1.69
CIRBP-203ENST00000444172 PROSER2Q86WR7 435 aaPredicted RBP25.61■■□□□ 1.69
CIRBP-203ENST00000444172 LTBP4Q8N2S1 1624 aa25.61■■□□□ 1.69
CIRBP-203ENST00000444172 CPS1P31327 1500 aa25.59■■□□□ 1.69
CIRBP-203ENST00000444172 NBPF1Q3BBV0 1214 aa25.59■■□□□ 1.69
CIRBP-203ENST00000444172 NWD1Q149M9 1564 aa25.59■■□□□ 1.69
CIRBP-203ENST00000444172 RBM33Q96EV2 1170 aaKnown RBP25.58■■□□□ 1.69
CIRBP-203ENST00000444172 ASXL1Q8IXJ9 1541 aa25.58■■□□□ 1.68
CIRBP-203ENST00000444172 KIAA1210Q9ULL0 1709 aa25.57■■□□□ 1.68
CIRBP-203ENST00000444172 YTHDC2Q9H6S0 1430 aaKnown RBP25.55■■□□□ 1.68
CIRBP-203ENST00000444172 LRPPRCP42704 1394 aaKnown RBP25.55■■□□□ 1.68
CIRBP-203ENST00000444172 XRN1Q8IZH2 1706 aaKnown RBP25.54■■□□□ 1.68
CIRBP-203ENST00000444172 CERKQ8TCT0 537 aa25.54■■□□□ 1.68
CIRBP-203ENST00000444172 TRAK1Q9UPV9 953 aa25.54■■□□□ 1.68
CIRBP-203ENST00000444172 TRPM1Q7Z4N2 1603 aa25.54■■□□□ 1.68
CIRBP-203ENST00000444172 NKTRP30414 1462 aaKnown RBP25.53■■□□□ 1.68
CIRBP-203ENST00000444172 LRRC7Q96NW7 1537 aa25.53■■□□□ 1.68
CIRBP-203ENST00000444172 ADGRB1O14514 1584 aa25.52■■□□□ 1.68
CIRBP-203ENST00000444172 ROCK2O75116 1388 aaKnown RBP25.52■■□□□ 1.68
CIRBP-203ENST00000444172 ABCC11Q96J66 1382 aa25.51■■□□□ 1.67
CIRBP-203ENST00000444172 TMEM94Q12767 1356 aa25.5■■□□□ 1.67
CIRBP-203ENST00000444172 C14orf37Q86TY3 774 aa25.5■■□□□ 1.67
CIRBP-203ENST00000444172 ROBO2Q9HCK4 1378 aa25.48■■□□□ 1.67
CIRBP-203ENST00000444172 WAPLQ7Z5K2 1190 aa25.48■■□□□ 1.67
CIRBP-203ENST00000444172 XIRP1Q702N8 1843 aaKnown RBP25.47■■□□□ 1.67
CIRBP-203ENST00000444172 KNDC1Q76NI1 1749 aa25.47■■□□□ 1.67
CIRBP-203ENST00000444172 TECPR2O15040 1411 aa25.46■■□□□ 1.67
CIRBP-203ENST00000444172 PTCH1Q13635 1447 aa25.46■■□□□ 1.67
CIRBP-203ENST00000444172 CARD11Q9BXL7 1154 aa25.45■■□□□ 1.66
CIRBP-203ENST00000444172 POGKQ9P215 609 aa25.45■■□□□ 1.66
CIRBP-203ENST00000444172 SAFB2Q14151 953 aaKnown RBP eCLIP25.44■■□□□ 1.66
CIRBP-203ENST00000444172 PRAM1Q96QH2 718 aa25.44■■□□□ 1.66
CIRBP-203ENST00000444172 RALGAPBQ86X10 1494 aa25.44■■□□□ 1.66
CIRBP-203ENST00000444172 SIRT1Q96EB6 747 aa25.43■■□□□ 1.66
CIRBP-203ENST00000444172 PLEKHH1Q9ULM0 1364 aa25.42■■□□□ 1.66
CIRBP-203ENST00000444172 DLC1Q96QB1 1528 aa25.41■■□□□ 1.66
CIRBP-203ENST00000444172 NCOA3Q9Y6Q9 1424 aa25.4■■□□□ 1.66
CIRBP-203ENST00000444172 MSH6P52701 1360 aa25.4■■□□□ 1.66
CIRBP-203ENST00000444172 FAM135BQ49AJ0 1406 aa25.39■■□□□ 1.66
CIRBP-203ENST00000444172 ARHGEF28Q8N1W1 1705 aaKnown RBP25.39■■□□□ 1.65
CIRBP-203ENST00000444172 GPRASP1Q5JY77 1395 aa25.39■■□□□ 1.65
CIRBP-203ENST00000444172 C19orf44Q9H6X5 657 aa25.38■■□□□ 1.65
CIRBP-203ENST00000444172 IQSEC2Q5JU85 1478 aa25.38■■□□□ 1.65
CIRBP-203ENST00000444172 NALCNQ8IZF0 1738 aa25.34■■□□□ 1.65
CIRBP-203ENST00000444172 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms