RNA–Protein interactions for RNA: ENST00000443875.5

C1S-208, Transcript of complement C1s, humanhuman

TSL 2

Gene C1S, Length 2,550 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1S-208ENST00000443875 NUP153P49790 1475 aaKnown RBP12.25□□□□□ -0.45
C1S-208ENST00000443875 NINLQ9Y2I6 1382 aa12.25□□□□□ -0.45
C1S-208ENST00000443875 PPP2R1AP30153 589 aa12.25□□□□□ -0.45
C1S-208ENST00000443875 CALD1Q05682 793 aaKnown RBP12.25□□□□□ -0.45
C1S-208ENST00000443875 PDE3AQ14432 1141 aa12.25□□□□□ -0.45
C1S-208ENST00000443875 NBPF1Q3BBV0 1214 aa12.25□□□□□ -0.45
C1S-208ENST00000443875 SPRYD3Q8NCJ5 442 aa12.25□□□□□ -0.45
C1S-208ENST00000443875 SPINK5Q9NQ38 1064 aaPredicted RBP12.25□□□□□ -0.45
C1S-208ENST00000443875 CFDP1Q9UEE9 299 aaPredicted RBP12.25□□□□□ -0.45
C1S-208ENST00000443875 DDX11L8A8MPP1 907 aa12.24□□□□□ -0.45
C1S-208ENST00000443875 TRIM44Q96DX7 344 aaPredicted RBP12.24□□□□□ -0.45
C1S-208ENST00000443875 CCDC144AA2RUR9 1427 aa12.23□□□□□ -0.45
C1S-208ENST00000443875 PTPRGP23470 1445 aa12.23□□□□□ -0.45
C1S-208ENST00000443875 GPATCH8Q9UKJ3 1502 aaKnown RBP12.23□□□□□ -0.45
C1S-208ENST00000443875 RTEL1-TNFRSF6BF6WH68 1400 aa12.22□□□□□ -0.45
C1S-208ENST00000443875 ABCC2Q92887 1545 aa12.22□□□□□ -0.45
C1S-208ENST00000443875 PLXNC1O60486 1568 aa12.22□□□□□ -0.45
C1S-208ENST00000443875 ABCC10Q5T3U5 1492 aa12.22□□□□□ -0.45
C1S-208ENST00000443875 TROQ12816 1431 aaPredicted RBP12.21□□□□□ -0.45
C1S-208ENST00000443875 RAPGEF6Q8TEU7 1601 aa12.21□□□□□ -0.45
C1S-208ENST00000443875 E9PSI1 815 aa12.21□□□□□ -0.45
C1S-208ENST00000443875 KIAA1211Q6ZU35 1233 aa12.21□□□□□ -0.45
C1S-208ENST00000443875 COG6Q9Y2V7 657 aa12.21□□□□□ -0.45
C1S-208ENST00000443875 MAGI2Q86UL8 1455 aa12.21□□□□□ -0.46
C1S-208ENST00000443875 TMF1P82094 1093 aa12.21□□□□□ -0.46
C1S-208ENST00000443875 PRDM4Q9UKN5 801 aa12.21□□□□□ -0.46
C1S-208ENST00000443875 SHANK2Q9UPX8 1470 aa12.2□□□□□ -0.46
C1S-208ENST00000443875 PIK3C2GO75747 1445 aa12.2□□□□□ -0.46
C1S-208ENST00000443875 PRG4Q92954 1404 aaPredicted RBP12.2□□□□□ -0.46
C1S-208ENST00000443875 PANK1Q8TE04 598 aa12.2□□□□□ -0.46
C1S-208ENST00000443875 ZNF692Q9BU19 519 aaPredicted RBP12.2□□□□□ -0.46
C1S-208ENST00000443875 PMFBP1Q8TBY8 1022 aa12.2□□□□□ -0.46
C1S-208ENST00000443875 WDR7Q9Y4E6 1490 aa12.19□□□□□ -0.46
C1S-208ENST00000443875 ADCY10Q96PN6 1610 aa12.19□□□□□ -0.46
C1S-208ENST00000443875 CCDC146Q8IYE0 955 aa12.19□□□□□ -0.46
C1S-208ENST00000443875 ZNF777Q9ULD5 760 aaPredicted RBP12.19□□□□□ -0.46
C1S-208ENST00000443875 CDC42BPAQ5VT25 1732 aa12.19□□□□□ -0.46
C1S-208ENST00000443875 GAS2L3Q86XJ1 694 aa12.19□□□□□ -0.46
C1S-208ENST00000443875 PDZRN3Q9UPQ7 1066 aa12.19□□□□□ -0.46
C1S-208ENST00000443875 A2MP01023 1474 aa12.18□□□□□ -0.46
C1S-208ENST00000443875 PLEKHG5O94827 1062 aa12.18□□□□□ -0.46
C1S-208ENST00000443875 KIAA0556O60303 1618 aa12.18□□□□□ -0.46
C1S-208ENST00000443875 C9orf84Q5VXU9 1444 aa12.18□□□□□ -0.46
C1S-208ENST00000443875 NCOA3Q9Y6Q9 1424 aa12.18□□□□□ -0.46
C1S-208ENST00000443875 APAF1O14727 1248 aa12.18□□□□□ -0.46
C1S-208ENST00000443875 CANXP27824 592 aaKnown RBP12.18□□□□□ -0.46
C1S-208ENST00000443875 AMER1Q5JTC6 1135 aaPredicted RBP12.18□□□□□ -0.46
C1S-208ENST00000443875 KNSTRNQ9Y448 316 aa12.18□□□□□ -0.46
C1S-208ENST00000443875 EIF2AK4Q9P2K8 1649 aaKnown RBP12.18□□□□□ -0.46
C1S-208ENST00000443875 PBRM1Q86U86 1689 aa12.17□□□□□ -0.46
C1S-208ENST00000443875 C22orf23Q9BZE7 217 aa12.17□□□□□ -0.46
C1S-208ENST00000443875 DDIT3P35638 169 aa12.17□□□□□ -0.46
C1S-208ENST00000443875 AAMPQ13685 434 aa12.17□□□□□ -0.46
C1S-208ENST00000443875 DMRT2Q9Y5R5 561 aa12.17□□□□□ -0.46
C1S-208ENST00000443875 ADAMTS12P58397 1594 aa12.17□□□□□ -0.46
C1S-208ENST00000443875 OFD1O75665 1012 aa12.16□□□□□ -0.46
C1S-208ENST00000443875 PCDHB15Q9Y5E8 787 aa12.16□□□□□ -0.46
C1S-208ENST00000443875 TERF1P54274 439 aa12.16□□□□□ -0.46
C1S-208ENST00000443875 RIPK4P57078 832 aa12.16□□□□□ -0.46
C1S-208ENST00000443875 FAM135AQ9P2D6 1515 aa12.15□□□□□ -0.46
C1S-208ENST00000443875 CCDC173Q0VFZ6 552 aa12.15□□□□□ -0.46
C1S-208ENST00000443875 MYO5CQ9NQX4 1742 aa12.15□□□□□ -0.46
C1S-208ENST00000443875 DISP1Q96F81 1524 aa12.15□□□□□ -0.46
C1S-208ENST00000443875 TARBP1Q13395 1621 aaKnown RBP12.15□□□□□ -0.46
C1S-208ENST00000443875 ASXL1Q8IXJ9 1541 aa12.15□□□□□ -0.47
C1S-208ENST00000443875 ZSCAN30Q86W11 494 aa12.15□□□□□ -0.47
C1S-208ENST00000443875 HSCBQ8IWL3 235 aa12.15□□□□□ -0.47
C1S-208ENST00000443875 PPP1R9BQ96SB3 815 aa12.15□□□□□ -0.47
C1S-208ENST00000443875 RNF17Q9BXT8 1623 aaKnown RBP12.14□□□□□ -0.47
C1S-208ENST00000443875 SYNMO15061 1565 aa12.14□□□□□ -0.47
C1S-208ENST00000443875 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.14□□□□□ -0.47
C1S-208ENST00000443875 NUP160Q12769 1436 aa12.14□□□□□ -0.47
C1S-208ENST00000443875 SCAPERQ9BY12 1400 aa12.14□□□□□ -0.47
C1S-208ENST00000443875 RGL3Q3MIN7 710 aa12.14□□□□□ -0.47
C1S-208ENST00000443875 NGEFQ8N5V2 710 aa12.14□□□□□ -0.47
C1S-208ENST00000443875 MAP7D2Q96T17 732 aa12.14□□□□□ -0.47
C1S-208ENST00000443875 CCDC141Q6ZP82 1450 aa12.13□□□□□ -0.47
C1S-208ENST00000443875 MFAP1P55081 439 aaKnown RBP12.13□□□□□ -0.47
C1S-208ENST00000443875 TNPO1Q92973 898 aaKnown RBP12.13□□□□□ -0.47
C1S-208ENST00000443875 SKOR2Q2VWA4 1001 aaPredicted RBP12.13□□□□□ -0.47
C1S-208ENST00000443875 RBM10P98175 930 aaKnown RBP12.12□□□□□ -0.47
C1S-208ENST00000443875 GBP4Q96PP9 640 aa12.12□□□□□ -0.47
C1S-208ENST00000443875 RWDD1Q9H446 243 aaPredicted RBP12.12□□□□□ -0.47
C1S-208ENST00000443875 PLA2R1Q13018 1463 aa12.11□□□□□ -0.47
C1S-208ENST00000443875 NPC1L1Q9UHC9 1359 aa12.11□□□□□ -0.47
C1S-208ENST00000443875 RLBP1P12271 317 aa12.11□□□□□ -0.47
C1S-208ENST00000443875 CIZ1Q9ULV3 898 aaPredicted RBP12.11□□□□□ -0.47
C1S-208ENST00000443875 SYNJ2O15056 1496 aa12.11□□□□□ -0.47
C1S-208ENST00000443875 PTMSP20962 102 aa12.11□□□□□ -0.47
C1S-208ENST00000443875 SMC5Q8IY18 1101 aa12.1□□□□□ -0.47
C1S-208ENST00000443875 MSNP26038 577 aaKnown RBP12.1□□□□□ -0.47
C1S-208ENST00000443875 NASPP49321 788 aaPredicted RBP12.1□□□□□ -0.47
C1S-208ENST00000443875 RARSP54136 660 aaKnown RBP12.1□□□□□ -0.47
C1S-208ENST00000443875 RAB3GAP1Q15042 981 aa12.1□□□□□ -0.47
C1S-208ENST00000443875 TNNQ9UQP3 1299 aa12.1□□□□□ -0.47
C1S-208ENST00000443875 SNX21Q969T3 373 aa12.09□□□□□ -0.47
C1S-208ENST00000443875 SHROOM2Q13796 1616 aa12.09□□□□□ -0.47
C1S-208ENST00000443875 MYOM1P52179 1685 aa12.09□□□□□ -0.47
C1S-208ENST00000443875 TSPY4P0CV99 314 aa12.08□□□□□ -0.48
C1S-208ENST00000443875 TSPY10P0CW01 314 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms