RNA–Protein interactions for RNA: ENST00000443574.1

HLA-DQB1-206, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-206ENST00000443574 POTEDQ86YR6 584 aa15.38■□□□□ 0.05
HLA-DQB1-206ENST00000443574 LTBP4Q8N2S1 1624 aa15.36■□□□□ 0.05
HLA-DQB1-206ENST00000443574 IQSEC2Q5JU85 1478 aa15.35■□□□□ 0.05
HLA-DQB1-206ENST00000443574 CPS1P31327 1500 aa15.35■□□□□ 0.05
HLA-DQB1-206ENST00000443574 CHGAP10645 457 aaKnown RBP15.35■□□□□ 0.05
HLA-DQB1-206ENST00000443574 HDGFP51858 240 aaKnown RBP15.35■□□□□ 0.05
HLA-DQB1-206ENST00000443574 TXNDC2Q86VQ3 553 aa15.35■□□□□ 0.05
HLA-DQB1-206ENST00000443574 ZFYVE9O95405 1425 aa15.34■□□□□ 0.05
HLA-DQB1-206ENST00000443574 RIMS2Q9UQ26 1411 aa15.34■□□□□ 0.05
HLA-DQB1-206ENST00000443574 DIP2AQ14689 1571 aa15.33■□□□□ 0.05
HLA-DQB1-206ENST00000443574 PPP1R15AO75807 674 aaPredicted RBP15.33■□□□□ 0.04
HLA-DQB1-206ENST00000443574 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.32■□□□□ 0.04
HLA-DQB1-206ENST00000443574 CCDC144AA2RUR9 1427 aa15.32■□□□□ 0.04
HLA-DQB1-206ENST00000443574 CNKSR2Q8WXI2 1034 aa15.31■□□□□ 0.04
HLA-DQB1-206ENST00000443574 PPLO60437 1756 aa15.31■□□□□ 0.04
HLA-DQB1-206ENST00000443574 CERKQ8TCT0 537 aa15.3■□□□□ 0.04
HLA-DQB1-206ENST00000443574 MPHOSPH9Q99550 1183 aa15.3■□□□□ 0.04
HLA-DQB1-206ENST00000443574 ZNF335Q9H4Z2 1342 aaPredicted RBP15.3■□□□□ 0.04
HLA-DQB1-206ENST00000443574 STRCP1A6NGW2 1772 aa15.29■□□□□ 0.04
HLA-DQB1-206ENST00000443574 NEXMIFQ5QGS0 1516 aa15.29■□□□□ 0.04
HLA-DQB1-206ENST00000443574 PLEKHG1Q9ULL1 1385 aa15.29■□□□□ 0.04
HLA-DQB1-206ENST00000443574 LTKP29376 864 aa15.29■□□□□ 0.04
HLA-DQB1-206ENST00000443574 HRCP23327 699 aa15.28■□□□□ 0.04
HLA-DQB1-206ENST00000443574 NCBP3Q53F19 620 aaKnown RBP15.28■□□□□ 0.04
HLA-DQB1-206ENST00000443574 ZNF326Q5BKZ1 582 aaKnown RBP15.28■□□□□ 0.04
HLA-DQB1-206ENST00000443574 BCANQ96GW7 911 aa15.28■□□□□ 0.04
HLA-DQB1-206ENST00000443574 IFT172Q9UG01 1749 aa15.28■□□□□ 0.04
HLA-DQB1-206ENST00000443574 NWD1Q149M9 1564 aa15.28■□□□□ 0.04
HLA-DQB1-206ENST00000443574 CHD2O14647 1828 aaKnown RBP15.27■□□□□ 0.03
HLA-DQB1-206ENST00000443574 SETBP1Q9Y6X0 1596 aa15.26■□□□□ 0.03
HLA-DQB1-206ENST00000443574 NKTRP30414 1462 aaKnown RBP15.25■□□□□ 0.03
HLA-DQB1-206ENST00000443574 KCNA4P22459 653 aa15.24■□□□□ 0.03
HLA-DQB1-206ENST00000443574 FBXO41Q8TF61 875 aa15.24■□□□□ 0.03
HLA-DQB1-206ENST00000443574 NRXN3Q9Y4C0 1643 aa15.24■□□□□ 0.03
HLA-DQB1-206ENST00000443574 XIRP1Q702N8 1843 aaKnown RBP15.22■□□□□ 0.03
HLA-DQB1-206ENST00000443574 RPGRIP1LQ68CZ1 1315 aa15.21■□□□□ 0.03
HLA-DQB1-206ENST00000443574 SLC26A8Q96RN1 970 aa15.2■□□□□ 0.02
HLA-DQB1-206ENST00000443574 PIK3R4Q99570 1358 aa15.2■□□□□ 0.02
HLA-DQB1-206ENST00000443574 LRRC7Q96NW7 1537 aa15.19■□□□□ 0.02
HLA-DQB1-206ENST00000443574 LAMC1P11047 1609 aa15.19■□□□□ 0.02
HLA-DQB1-206ENST00000443574 SETD1AO15047 1707 aaKnown RBP15.19■□□□□ 0.02
HLA-DQB1-206ENST00000443574 SPATA31E1Q6ZUB1 1445 aa15.18■□□□□ 0.02
HLA-DQB1-206ENST00000443574 ADAMTS13Q76LX8 1427 aa15.18■□□□□ 0.02
HLA-DQB1-206ENST00000443574 XRN1Q8IZH2 1706 aaKnown RBP15.18■□□□□ 0.02
HLA-DQB1-206ENST00000443574 TRIM26Q12899 539 aaPredicted RBP15.18■□□□□ 0.02
HLA-DQB1-206ENST00000443574 NUTM2DQ5VT03 806 aaPredicted RBP15.18■□□□□ 0.02
HLA-DQB1-206ENST00000443574 ANKRD30BQ9BXX2 1392 aa15.17■□□□□ 0.02
HLA-DQB1-206ENST00000443574 VGFO15240 615 aaPredicted RBP15.17■□□□□ 0.02
HLA-DQB1-206ENST00000443574 TBX22Q9Y458 520 aa15.16■□□□□ 0.02
HLA-DQB1-206ENST00000443574 KCNA6P17658 529 aa15.15■□□□□ 0.02
HLA-DQB1-206ENST00000443574 ILDR1Q86SU0 546 aaPredicted RBP15.15■□□□□ 0.02
HLA-DQB1-206ENST00000443574 MYOM2P54296 1465 aa15.14■□□□□ 0.01
HLA-DQB1-206ENST00000443574 ALKQ9UM73 1620 aa15.14■□□□□ 0.01
HLA-DQB1-206ENST00000443574 UBAP1LF5GYI3 381 aa15.11■□□□□ 0.01
HLA-DQB1-206ENST00000443574 RGL3Q3MIN7 710 aa15.11■□□□□ 0.01
HLA-DQB1-206ENST00000443574 KNDC1Q76NI1 1749 aa15.11■□□□□ 0.01
HLA-DQB1-206ENST00000443574 TMEM94Q12767 1356 aa15.11■□□□□ 0.01
HLA-DQB1-206ENST00000443574 TOM1O60784 492 aa15.1■□□□□ 0.01
HLA-DQB1-206ENST00000443574 PIK3C2GO75747 1445 aa15.09■□□□□ 0.01
HLA-DQB1-206ENST00000443574 PROSER2Q86WR7 435 aaPredicted RBP15.09■□□□□ 0.01
HLA-DQB1-206ENST00000443574 MSH6P52701 1360 aa15.09■□□□□ 0.01
HLA-DQB1-206ENST00000443574 NCOA3Q9Y6Q9 1424 aa15.09■□□□□ 0.01
HLA-DQB1-206ENST00000443574 NALCNQ8IZF0 1738 aa15.07■□□□□ 0
HLA-DQB1-206ENST00000443574 NPM3O75607 178 aaKnown RBP15.07■□□□□ 0
HLA-DQB1-206ENST00000443574 PTCH1Q13635 1447 aa15.07■□□□□ 0
HLA-DQB1-206ENST00000443574 NRXN1Q9ULB1 1477 aa15.07■□□□□ 0
HLA-DQB1-206ENST00000443574 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.06■□□□□ 0
HLA-DQB1-206ENST00000443574 PRAG1Q86YV5 1406 aa15.06■□□□□ 0
HLA-DQB1-206ENST00000443574 PTPRUQ92729 1446 aa15.06■□□□□ 0
HLA-DQB1-206ENST00000443574 C14orf37Q86TY3 774 aa15.05■□□□□ -0
HLA-DQB1-206ENST00000443574 RNF216Q9NWF9 866 aaPredicted RBP15.05■□□□□ -0
HLA-DQB1-206ENST00000443574 AMOTL2Q9Y2J4 779 aa15.05■□□□□ -0
HLA-DQB1-206ENST00000443574 METP08581 1390 aa15.05■□□□□ -0
HLA-DQB1-206ENST00000443574 STAC3Q96MF2 364 aa15.04■□□□□ -0
HLA-DQB1-206ENST00000443574 KIAA1210Q9ULL0 1709 aa15.03■□□□□ -0
HLA-DQB1-206ENST00000443574 DCCP43146 1447 aa15.03■□□□□ -0
HLA-DQB1-206ENST00000443574 ADGRF5Q8IZF2 1346 aa15.03■□□□□ -0
HLA-DQB1-206ENST00000443574 ROBO1Q9Y6N7 1651 aa15.03■□□□□ -0
HLA-DQB1-206ENST00000443574 ASXL1Q8IXJ9 1541 aa15.02■□□□□ -0
HLA-DQB1-206ENST00000443574 HOXD11P31277 338 aaPredicted RBP15.02■□□□□ -0
HLA-DQB1-206ENST00000443574 DHX57Q6P158 1386 aaKnown RBP15.01□□□□□ -0.01
HLA-DQB1-206ENST00000443574 PIP4K2BP78356 416 aa15.01□□□□□ -0.01
HLA-DQB1-206ENST00000443574 ADGRL3Q9HAR2 1447 aa15□□□□□ -0.01
HLA-DQB1-206ENST00000443574 TECPR2O15040 1411 aa15□□□□□ -0.01
HLA-DQB1-206ENST00000443574 DCAF11Q8TEB1 546 aa14.99□□□□□ -0.01
HLA-DQB1-206ENST00000443574 RBM33Q96EV2 1170 aaKnown RBP14.98□□□□□ -0.01
HLA-DQB1-206ENST00000443574 YTHDC2Q9H6S0 1430 aaKnown RBP14.98□□□□□ -0.01
HLA-DQB1-206ENST00000443574 CDC42BPGQ6DT37 1551 aa14.98□□□□□ -0.01
HLA-DQB1-206ENST00000443574 LRPPRCP42704 1394 aaKnown RBP14.98□□□□□ -0.01
HLA-DQB1-206ENST00000443574 ATF3P18847 181 aa14.97□□□□□ -0.01
HLA-DQB1-206ENST00000443574 CADPS2Q86UW7 1296 aa14.97□□□□□ -0.01
HLA-DQB1-206ENST00000443574 C19orf44Q9H6X5 657 aa14.97□□□□□ -0.01
HLA-DQB1-206ENST00000443574 DLC1Q96QB1 1528 aa14.96□□□□□ -0.02
HLA-DQB1-206ENST00000443574 ROBO2Q9HCK4 1378 aa14.96□□□□□ -0.02
HLA-DQB1-206ENST00000443574 PHLPP1O60346 1717 aa14.95□□□□□ -0.02
HLA-DQB1-206ENST00000443574 ARHGEF28Q8N1W1 1705 aaKnown RBP14.95□□□□□ -0.02
HLA-DQB1-206ENST00000443574 ADGRB1O14514 1584 aa14.95□□□□□ -0.02
HLA-DQB1-206ENST00000443574 FAM135BQ49AJ0 1406 aa14.95□□□□□ -0.02
HLA-DQB1-206ENST00000443574 C14orf93Q9H972 538 aaKnown RBP14.95□□□□□ -0.02
HLA-DQB1-206ENST00000443574 KDM2AQ9Y2K7 1162 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms