RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 TRIM26Q12899 539 aaPredicted RBP19.13■□□□□ 0.65
PDLIM2-212ENST00000443561 SPATA31E1Q6ZUB1 1445 aa19.13■□□□□ 0.65
PDLIM2-212ENST00000443561 ANKRD30BQ9BXX2 1392 aa19.12■□□□□ 0.65
PDLIM2-212ENST00000443561 ZNF335Q9H4Z2 1342 aaPredicted RBP19.11■□□□□ 0.65
PDLIM2-212ENST00000443561 SETD1AO15047 1707 aaKnown RBP19.11■□□□□ 0.65
PDLIM2-212ENST00000443561 TXNDC2Q86VQ3 553 aa19.1■□□□□ 0.65
PDLIM2-212ENST00000443561 STAG3Q9UJ98 1225 aa19.09■□□□□ 0.65
PDLIM2-212ENST00000443561 DMRT2Q9Y5R5 561 aa19.09■□□□□ 0.65
PDLIM2-212ENST00000443561 ADAMTS13Q76LX8 1427 aa19.08■□□□□ 0.65
PDLIM2-212ENST00000443561 ACIN1Q9UKV3 1341 aaKnown RBP19.08■□□□□ 0.65
PDLIM2-212ENST00000443561 CHGAP10645 457 aaKnown RBP19.08■□□□□ 0.64
PDLIM2-212ENST00000443561 XIRP1Q702N8 1843 aaKnown RBP19.08■□□□□ 0.64
PDLIM2-212ENST00000443561 CCDC144AA2RUR9 1427 aa19.08■□□□□ 0.64
PDLIM2-212ENST00000443561 PLEKHG1Q9ULL1 1385 aa19.07■□□□□ 0.64
PDLIM2-212ENST00000443561 SETBP1Q9Y6X0 1596 aa19.07■□□□□ 0.64
PDLIM2-212ENST00000443561 NWD1Q149M9 1564 aa19.06■□□□□ 0.64
PDLIM2-212ENST00000443561 NUTM2DQ5VT03 806 aaPredicted RBP19.06■□□□□ 0.64
PDLIM2-212ENST00000443561 CHD2O14647 1828 aaKnown RBP19.05■□□□□ 0.64
PDLIM2-212ENST00000443561 FBXO41Q8TF61 875 aa19.05■□□□□ 0.64
PDLIM2-212ENST00000443561 DIP2AQ14689 1571 aa19.02■□□□□ 0.64
PDLIM2-212ENST00000443561 SENP3Q9H4L4 574 aaPredicted RBP19.02■□□□□ 0.64
PDLIM2-212ENST00000443561 EID1Q9Y6B2 187 aa19.02■□□□□ 0.64
PDLIM2-212ENST00000443561 DHX57Q6P158 1386 aaKnown RBP19.02■□□□□ 0.64
PDLIM2-212ENST00000443561 SLC26A8Q96RN1 970 aa19■□□□□ 0.63
PDLIM2-212ENST00000443561 XRN1Q8IZH2 1706 aaKnown RBP19■□□□□ 0.63
PDLIM2-212ENST00000443561 ALKQ9UM73 1620 aa18.99■□□□□ 0.63
PDLIM2-212ENST00000443561 CPS1P31327 1500 aa18.99■□□□□ 0.63
PDLIM2-212ENST00000443561 PTPRUQ92729 1446 aa18.99■□□□□ 0.63
PDLIM2-212ENST00000443561 ASXL1Q8IXJ9 1541 aa18.98■□□□□ 0.63
PDLIM2-212ENST00000443561 LRRC7Q96NW7 1537 aa18.98■□□□□ 0.63
PDLIM2-212ENST00000443561 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.97■□□□□ 0.63
PDLIM2-212ENST00000443561 NRXN1Q9ULB1 1477 aa18.97■□□□□ 0.63
PDLIM2-212ENST00000443561 ZNF326Q5BKZ1 582 aaKnown RBP18.96■□□□□ 0.63
PDLIM2-212ENST00000443561 CERKQ8TCT0 537 aa18.96■□□□□ 0.63
PDLIM2-212ENST00000443561 MYOM2P54296 1465 aa18.95■□□□□ 0.62
PDLIM2-212ENST00000443561 PPP1R15AO75807 674 aaPredicted RBP18.94■□□□□ 0.62
PDLIM2-212ENST00000443561 IQSEC2Q5JU85 1478 aa18.94■□□□□ 0.62
PDLIM2-212ENST00000443561 ADGRF5Q8IZF2 1346 aa18.94■□□□□ 0.62
PDLIM2-212ENST00000443561 RPGRIP1LQ68CZ1 1315 aa18.93■□□□□ 0.62
PDLIM2-212ENST00000443561 METP08581 1390 aa18.93■□□□□ 0.62
PDLIM2-212ENST00000443561 PIK3C2GO75747 1445 aa18.92■□□□□ 0.62
PDLIM2-212ENST00000443561 RGL3Q3MIN7 710 aa18.92■□□□□ 0.62
PDLIM2-212ENST00000443561 NKTRP30414 1462 aaKnown RBP18.91■□□□□ 0.62
PDLIM2-212ENST00000443561 TBX22Q9Y458 520 aa18.91■□□□□ 0.62
PDLIM2-212ENST00000443561 HDGFP51858 240 aaKnown RBP18.88■□□□□ 0.61
PDLIM2-212ENST00000443561 PCGF6Q9BYE7 350 aa18.88■□□□□ 0.61
PDLIM2-212ENST00000443561 KCNA6P17658 529 aa18.87■□□□□ 0.61
PDLIM2-212ENST00000443561 PIK3R4Q99570 1358 aa18.87■□□□□ 0.61
PDLIM2-212ENST00000443561 PRAG1Q86YV5 1406 aa18.86■□□□□ 0.61
PDLIM2-212ENST00000443561 KNDC1Q76NI1 1749 aa18.86■□□□□ 0.61
PDLIM2-212ENST00000443561 LAMC1P11047 1609 aa18.85■□□□□ 0.61
PDLIM2-212ENST00000443561 SIN3AQ96ST3 1273 aa18.85■□□□□ 0.61
PDLIM2-212ENST00000443561 VGFO15240 615 aaPredicted RBP18.84■□□□□ 0.61
PDLIM2-212ENST00000443561 BCANQ96GW7 911 aa18.84■□□□□ 0.61
PDLIM2-212ENST00000443561 ADGRB1O14514 1584 aa18.84■□□□□ 0.61
PDLIM2-212ENST00000443561 NALCNQ8IZF0 1738 aa18.83■□□□□ 0.61
PDLIM2-212ENST00000443561 RBM33Q96EV2 1170 aaKnown RBP18.83■□□□□ 0.6
PDLIM2-212ENST00000443561 TMEM94Q12767 1356 aa18.82■□□□□ 0.6
PDLIM2-212ENST00000443561 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.8■□□□□ 0.6
PDLIM2-212ENST00000443561 AMOTL2Q9Y2J4 779 aa18.79■□□□□ 0.6
PDLIM2-212ENST00000443561 KIAA1210Q9ULL0 1709 aa18.78■□□□□ 0.6
PDLIM2-212ENST00000443561 TECPR2O15040 1411 aa18.78■□□□□ 0.6
PDLIM2-212ENST00000443561 PTCH1Q13635 1447 aa18.78■□□□□ 0.6
PDLIM2-212ENST00000443561 ROBO2Q9HCK4 1378 aa18.78■□□□□ 0.6
PDLIM2-212ENST00000443561 CFAP70Q5T0N1 1121 aa18.76■□□□□ 0.59
PDLIM2-212ENST00000443561 DCAF11Q8TEB1 546 aa18.76■□□□□ 0.59
PDLIM2-212ENST00000443561 C14orf93Q9H972 538 aaKnown RBP18.76■□□□□ 0.59
PDLIM2-212ENST00000443561 TRPM1Q7Z4N2 1603 aa18.74■□□□□ 0.59
PDLIM2-212ENST00000443561 TMEM132EQ6IEE7 984 aa18.74■□□□□ 0.59
PDLIM2-212ENST00000443561 PROSER2Q86WR7 435 aaPredicted RBP18.74■□□□□ 0.59
PDLIM2-212ENST00000443561 KDM2AQ9Y2K7 1162 aa18.74■□□□□ 0.59
PDLIM2-212ENST00000443561 ARHGEF28Q8N1W1 1705 aaKnown RBP18.74■□□□□ 0.59
PDLIM2-212ENST00000443561 LRPPRCP42704 1394 aaKnown RBP18.73■□□□□ 0.59
PDLIM2-212ENST00000443561 L3MBTL2Q969R5 705 aa18.73■□□□□ 0.59
PDLIM2-212ENST00000443561 YTHDC2Q9H6S0 1430 aaKnown RBP18.73■□□□□ 0.59
PDLIM2-212ENST00000443561 NCOA3Q9Y6Q9 1424 aa18.72■□□□□ 0.59
PDLIM2-212ENST00000443561 PLEKHH1Q9ULM0 1364 aa18.71■□□□□ 0.59
PDLIM2-212ENST00000443561 DLC1Q96QB1 1528 aa18.7■□□□□ 0.58
PDLIM2-212ENST00000443561 NEUROD1Q13562 356 aa18.7■□□□□ 0.58
PDLIM2-212ENST00000443561 ADGRL3Q9HAR2 1447 aa18.7■□□□□ 0.58
PDLIM2-212ENST00000443561 ABCC11Q96J66 1382 aa18.69■□□□□ 0.58
PDLIM2-212ENST00000443561 UBAP1LF5GYI3 381 aa18.69■□□□□ 0.58
PDLIM2-212ENST00000443561 ROBO1Q9Y6N7 1651 aa18.68■□□□□ 0.58
PDLIM2-212ENST00000443561 ILDR2Q71H61 639 aa18.67■□□□□ 0.58
PDLIM2-212ENST00000443561 CDC42BPGQ6DT37 1551 aa18.66■□□□□ 0.58
PDLIM2-212ENST00000443561 DCCP43146 1447 aa18.66■□□□□ 0.58
PDLIM2-212ENST00000443561 NBPF8Q3BBV2 869 aa18.65■□□□□ 0.58
PDLIM2-212ENST00000443561 STAC3Q96MF2 364 aa18.65■□□□□ 0.58
PDLIM2-212ENST00000443561 MSH6P52701 1360 aa18.65■□□□□ 0.58
PDLIM2-212ENST00000443561 STK26Q9P289 416 aa18.64■□□□□ 0.57
PDLIM2-212ENST00000443561 MST1RQ04912 1400 aa18.64■□□□□ 0.57
PDLIM2-212ENST00000443561 FAM135BQ49AJ0 1406 aa18.64■□□□□ 0.57
PDLIM2-212ENST00000443561 FMN2Q9NZ56 1722 aa18.63■□□□□ 0.57
PDLIM2-212ENST00000443561 NBPF1Q3BBV0 1214 aa18.63■□□□□ 0.57
PDLIM2-212ENST00000443561 WAPLQ7Z5K2 1190 aa18.63■□□□□ 0.57
PDLIM2-212ENST00000443561 ADGRB2O60241 1585 aa18.63■□□□□ 0.57
PDLIM2-212ENST00000443561 RGPD8O14715 1765 aaPredicted RBP18.6■□□□□ 0.57
PDLIM2-212ENST00000443561 USP32Q8NFA0 1604 aa18.6■□□□□ 0.57
PDLIM2-212ENST00000443561 TOM1O60784 492 aa18.6■□□□□ 0.57
PDLIM2-212ENST00000443561 PIP4K2BP78356 416 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms