RNA–Protein interactions for RNA: ENST00000443047.6

CHFR-204, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 2,990 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-204ENST00000443047 E9PCH4 1651 aa19.81■□□□□ 0.76
CHFR-204ENST00000443047 RCAN3Q9UKA8 241 aa19.8■□□□□ 0.76
CHFR-204ENST00000443047 RRAGDQ9NQL2 400 aaPredicted RBP19.8■□□□□ 0.76
CHFR-204ENST00000443047 GPRASP1Q5JY77 1395 aa19.79■□□□□ 0.76
CHFR-204ENST00000443047 ATP10AO60312 1499 aa19.79■□□□□ 0.76
CHFR-204ENST00000443047 MYBBP1AQ9BQG0 1328 aaKnown RBP19.79■□□□□ 0.76
CHFR-204ENST00000443047 PER1O15534 1290 aaPredicted RBP19.79■□□□□ 0.76
CHFR-204ENST00000443047 OSCARQ8IYS5 282 aa19.79■□□□□ 0.76
CHFR-204ENST00000443047 ATP7AQ04656 1500 aa19.78■□□□□ 0.76
CHFR-204ENST00000443047 NPM1P06748 294 aaKnown RBP eCLIP19.77■□□□□ 0.76
CHFR-204ENST00000443047 RTEL1-TNFRSF6BF6WH68 1400 aa19.77■□□□□ 0.75
CHFR-204ENST00000443047 UGGT1Q9NYU2 1555 aa19.76■□□□□ 0.75
CHFR-204ENST00000443047 TMF1P82094 1093 aa19.75■□□□□ 0.75
CHFR-204ENST00000443047 RALBP1Q15311 655 aa19.75■□□□□ 0.75
CHFR-204ENST00000443047 PRDM15P57071 1507 aaPredicted RBP19.75■□□□□ 0.75
CHFR-204ENST00000443047 HSP90AA2PQ14568 343 aaPredicted RBP19.75■□□□□ 0.75
CHFR-204ENST00000443047 KTN1Q86UP2 1357 aaKnown RBP19.74■□□□□ 0.75
CHFR-204ENST00000443047 COL17A1Q9UMD9 1497 aaPredicted RBP19.74■□□□□ 0.75
CHFR-204ENST00000443047 CHGAP10645 457 aaKnown RBP19.74■□□□□ 0.75
CHFR-204ENST00000443047 ABCA9Q8IUA7 1624 aa19.74■□□□□ 0.75
CHFR-204ENST00000443047 GGT6Q6P531 493 aa19.73■□□□□ 0.75
CHFR-204ENST00000443047 KANK1Q14678 1352 aa19.72■□□□□ 0.75
CHFR-204ENST00000443047 SENP3Q9H4L4 574 aaPredicted RBP19.72■□□□□ 0.75
CHFR-204ENST00000443047 POGKQ9P215 609 aa19.72■□□□□ 0.75
CHFR-204ENST00000443047 CLTCL1P53675 1640 aa19.72■□□□□ 0.75
CHFR-204ENST00000443047 CFAP70Q5T0N1 1121 aa19.71■□□□□ 0.75
CHFR-204ENST00000443047 PLEKHG5O94827 1062 aa19.71■□□□□ 0.75
CHFR-204ENST00000443047 ARAP3Q8WWN8 1544 aa19.7■□□□□ 0.74
CHFR-204ENST00000443047 BRD4O60885 1362 aaPredicted RBP19.7■□□□□ 0.74
CHFR-204ENST00000443047 NLRP13Q86W25 1043 aa19.7■□□□□ 0.74
CHFR-204ENST00000443047 INO80Q9ULG1 1556 aaPredicted RBP19.7■□□□□ 0.74
CHFR-204ENST00000443047 ADGRF5Q8IZF2 1346 aa19.69■□□□□ 0.74
CHFR-204ENST00000443047 PARD3Q8TEW0 1356 aa19.69■□□□□ 0.74
CHFR-204ENST00000443047 TRPM2O94759 1503 aa19.69■□□□□ 0.74
CHFR-204ENST00000443047 CFAP65Q6ZU64 1925 aaKnown RBP19.69■□□□□ 0.74
CHFR-204ENST00000443047 RAPGEF3O95398 923 aa19.68■□□□□ 0.74
CHFR-204ENST00000443047 PTPRTO14522 1441 aa19.68■□□□□ 0.74
CHFR-204ENST00000443047 CRBNQ96SW2 442 aa19.68■□□□□ 0.74
CHFR-204ENST00000443047 HSP90AA1P07900 732 aaKnown RBP19.67■□□□□ 0.74
CHFR-204ENST00000443047 LRPPRCP42704 1394 aaKnown RBP19.67■□□□□ 0.74
CHFR-204ENST00000443047 SPHKAPQ2M3C7 1700 aa19.67■□□□□ 0.74
CHFR-204ENST00000443047 EIF2AK4Q9P2K8 1649 aaKnown RBP19.67■□□□□ 0.74
CHFR-204ENST00000443047 MADDQ8WXG6 1647 aa19.66■□□□□ 0.74
CHFR-204ENST00000443047 CDCA7LQ96GN5 454 aa19.66■□□□□ 0.74
CHFR-204ENST00000443047 PODXL2Q9NZ53 605 aa19.66■□□□□ 0.74
CHFR-204ENST00000443047 PNNQ9H307 717 aaKnown RBP19.66■□□□□ 0.74
CHFR-204ENST00000443047 CD109Q6YHK3 1445 aa19.65■□□□□ 0.74
CHFR-204ENST00000443047 NUTM2DQ5VT03 806 aaPredicted RBP19.65■□□□□ 0.74
CHFR-204ENST00000443047 RGS3P49796 1198 aa19.65■□□□□ 0.74
CHFR-204ENST00000443047 DEPDC5O75140 1603 aa19.64■□□□□ 0.73
CHFR-204ENST00000443047 TET3O43151 1660 aa19.63■□□□□ 0.73
CHFR-204ENST00000443047 KIDINS220Q9ULH0 1771 aa19.63■□□□□ 0.73
CHFR-204ENST00000443047 MROH1Q8NDA8 1641 aa19.63■□□□□ 0.73
CHFR-204ENST00000443047 LAMC1P11047 1609 aa19.61■□□□□ 0.73
CHFR-204ENST00000443047 SLKQ9H2G2 1235 aaPredicted RBP19.61■□□□□ 0.73
CHFR-204ENST00000443047 CEP152O94986 1710 aa19.61■□□□□ 0.73
CHFR-204ENST00000443047 RNF17Q9BXT8 1623 aaKnown RBP19.61■□□□□ 0.73
CHFR-204ENST00000443047 KNSTRNQ9Y448 316 aa19.61■□□□□ 0.73
CHFR-204ENST00000443047 VWDEQ8N2E2 1590 aa19.6■□□□□ 0.73
CHFR-204ENST00000443047 ZNF518AQ6AHZ1 1483 aa19.58■□□□□ 0.73
CHFR-204ENST00000443047 SCAF11Q99590 1463 aaKnown RBP19.58■□□□□ 0.73
CHFR-204ENST00000443047 FAM161AQ3B820 660 aa19.58■□□□□ 0.72
CHFR-204ENST00000443047 C20orf194Q5TEA3 1177 aa19.57■□□□□ 0.72
CHFR-204ENST00000443047 TMEM132EQ6IEE7 984 aa19.56■□□□□ 0.72
CHFR-204ENST00000443047 GZF1Q9H116 711 aaPredicted RBP19.56■□□□□ 0.72
CHFR-204ENST00000443047 ADAMTS8Q9UP79 889 aa19.56■□□□□ 0.72
CHFR-204ENST00000443047 PPRC1Q5VV67 1664 aaKnown RBP19.56■□□□□ 0.72
CHFR-204ENST00000443047 RRP9O43818 475 aaKnown RBP19.56■□□□□ 0.72
CHFR-204ENST00000443047 CYB5RLQ6IPT4 315 aa19.56■□□□□ 0.72
CHFR-204ENST00000443047 TRAK1Q9UPV9 953 aa19.55■□□□□ 0.72
CHFR-204ENST00000443047 IQGAP1P46940 1657 aa19.55■□□□□ 0.72
CHFR-204ENST00000443047 AMER1Q5JTC6 1135 aaPredicted RBP19.55■□□□□ 0.72
CHFR-204ENST00000443047 L1TD1Q5T7N2 865 aaKnown RBP19.55■□□□□ 0.72
CHFR-204ENST00000443047 C8orf34Q49A92 452 aa19.54■□□□□ 0.72
CHFR-204ENST00000443047 NOS1P29475 1434 aa19.54■□□□□ 0.72
CHFR-204ENST00000443047 PPP2R1AP30153 589 aa19.54■□□□□ 0.72
CHFR-204ENST00000443047 POGZQ7Z3K3 1410 aa19.54■□□□□ 0.72
CHFR-204ENST00000443047 EFCAB6Q5THR3 1501 aa19.53■□□□□ 0.72
CHFR-204ENST00000443047 NPATQ14207 1427 aa19.52■□□□□ 0.72
CHFR-204ENST00000443047 MROH2AA6NES4 1674 aa19.52■□□□□ 0.72
CHFR-204ENST00000443047 PANK2Q9BZ23 570 aa19.51■□□□□ 0.71
CHFR-204ENST00000443047 FRMPD1Q5SYB0 1578 aa19.5■□□□□ 0.71
CHFR-204ENST00000443047 ABCA6Q8N139 1617 aa19.5■□□□□ 0.71
CHFR-204ENST00000443047 XRCC6P12956 609 aaKnown RBP eCLIP19.48■□□□□ 0.716e-7■■■■■ 28.8
CHFR-204ENST00000443047 CDCA8Q53HL2 280 aa19.48■□□□□ 0.71
CHFR-204ENST00000443047 CCDC146Q8IYE0 955 aa19.48■□□□□ 0.71
CHFR-204ENST00000443047 CARD14Q9BXL6 1004 aa19.48■□□□□ 0.71
CHFR-204ENST00000443047 EIF3AQ14152 1382 aaKnown RBP19.48■□□□□ 0.71
CHFR-204ENST00000443047 MAP3K4Q9Y6R4 1608 aa19.47■□□□□ 0.71
CHFR-204ENST00000443047 KIF1BO60333 1816 aa19.47■□□□□ 0.71
CHFR-204ENST00000443047 STAC3Q96MF2 364 aa19.47■□□□□ 0.71
CHFR-204ENST00000443047 GOLGA6L3A6NEY3 463 aa19.46■□□□□ 0.71
CHFR-204ENST00000443047 SPRYD3Q8NCJ5 442 aa19.46■□□□□ 0.71
CHFR-204ENST00000443047 TNNT2P45379 298 aaPredicted RBP19.46■□□□□ 0.71
CHFR-204ENST00000443047 SAFB2Q14151 953 aaKnown RBP eCLIP19.46■□□□□ 0.71
CHFR-204ENST00000443047 WDR43Q15061 677 aaKnown RBP eCLIP19.45■□□□□ 0.7
CHFR-204ENST00000443047 ERVK-7P63135 1459 aa19.45■□□□□ 0.7
CHFR-204ENST00000443047 A0A0U1RQG5 324 aaPredicted RBP19.44■□□□□ 0.7
CHFR-204ENST00000443047 CENPQQ7L2Z9 268 aaPredicted RBP19.44■□□□□ 0.7
CHFR-204ENST00000443047 CLCN1P35523 988 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms