RNA–Protein interactions for RNA: ENST00000443003.2

RPSA-202, Transcript of ribosomal protein SA, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RPSA, Length 1,032 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-202ENST00000443003 LMTK2Q8IWU2 1503 aa11.73□□□□□ -0.53
RPSA-202ENST00000443003 COL16A1Q07092 1604 aaPredicted RBP11.72□□□□□ -0.53
RPSA-202ENST00000443003 IDI1Q13907 227 aa11.72□□□□□ -0.53
RPSA-202ENST00000443003 CHIC2Q9UKJ5 165 aa11.72□□□□□ -0.53
RPSA-202ENST00000443003 ANKRD30AQ9BXX3 1397 aa11.69□□□□□ -0.54
RPSA-202ENST00000443003 JCADQ9P266 1359 aa11.69□□□□□ -0.54
RPSA-202ENST00000443003 PPP1R15AO75807 674 aaPredicted RBP11.69□□□□□ -0.54
RPSA-202ENST00000443003 NOS1P29475 1434 aa11.69□□□□□ -0.54
RPSA-202ENST00000443003 FGD6Q6ZV73 1430 aa11.69□□□□□ -0.54
RPSA-202ENST00000443003 LRP6O75581 1613 aa11.68□□□□□ -0.54
RPSA-202ENST00000443003 MEX3CQ5U5Q3 659 aaKnown RBP11.68□□□□□ -0.54
RPSA-202ENST00000443003 C14orf37Q86TY3 774 aa11.68□□□□□ -0.54
RPSA-202ENST00000443003 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.67□□□□□ -0.54
RPSA-202ENST00000443003 SLAIN2Q9P270 581 aa11.67□□□□□ -0.54
RPSA-202ENST00000443003 SHPRHQ149N8 1683 aa11.67□□□□□ -0.54
RPSA-202ENST00000443003 TMEM131LA2VDJ0 1609 aa11.67□□□□□ -0.54
RPSA-202ENST00000443003 APLP2Q06481 763 aa11.66□□□□□ -0.54
RPSA-202ENST00000443003 TRIM52Q96A61 297 aa11.66□□□□□ -0.54
RPSA-202ENST00000443003 ZFYVE9O95405 1425 aa11.66□□□□□ -0.54
RPSA-202ENST00000443003 RIMS2Q9UQ26 1411 aa11.66□□□□□ -0.54
RPSA-202ENST00000443003 PLEKHG1Q9ULL1 1385 aa11.65□□□□□ -0.55
RPSA-202ENST00000443003 CHGAP10645 457 aaKnown RBP11.64□□□□□ -0.55
RPSA-202ENST00000443003 SLC52A1Q9NWF4 448 aa11.64□□□□□ -0.55
RPSA-202ENST00000443003 AHDC1Q5TGY3 1603 aaPredicted RBP11.64□□□□□ -0.55
RPSA-202ENST00000443003 RPRD2Q5VT52 1461 aaKnown RBP11.63□□□□□ -0.55
RPSA-202ENST00000443003 E9PCH4 1651 aa11.63□□□□□ -0.55
RPSA-202ENST00000443003 NUTM2DQ5VT03 806 aaPredicted RBP11.63□□□□□ -0.55
RPSA-202ENST00000443003 ADGRL2O95490 1459 aa11.63□□□□□ -0.55
RPSA-202ENST00000443003 DIP2AQ14689 1571 aa11.62□□□□□ -0.55
RPSA-202ENST00000443003 UNC13BO14795 1591 aa11.62□□□□□ -0.55
RPSA-202ENST00000443003 SPATA31A6Q5VVP1 1343 aa11.61□□□□□ -0.55
RPSA-202ENST00000443003 ANKRD50Q9ULJ7 1429 aa11.61□□□□□ -0.55
RPSA-202ENST00000443003 FAM50AQ14320 339 aaKnown RBP11.61□□□□□ -0.55
RPSA-202ENST00000443003 ZNF772Q68DY9 489 aaPredicted RBP11.61□□□□□ -0.55
RPSA-202ENST00000443003 NUTM2BA6NNL0 878 aaPredicted RBP11.6□□□□□ -0.55
RPSA-202ENST00000443003 NUTM2EB1AL46 878 aaPredicted RBP11.6□□□□□ -0.55
RPSA-202ENST00000443003 ATF3P18847 181 aa11.6□□□□□ -0.55
RPSA-202ENST00000443003 NUTM2AQ8IVF1 878 aaPredicted RBP11.6□□□□□ -0.55
RPSA-202ENST00000443003 UPF1Q92900 1129 aaKnown RBP eCLIP11.6□□□□□ -0.55
RPSA-202ENST00000443003 TRPM2O94759 1503 aa11.6□□□□□ -0.55
RPSA-202ENST00000443003 ADAMTS13Q76LX8 1427 aa11.6□□□□□ -0.55
RPSA-202ENST00000443003 HDGFP51858 240 aaKnown RBP11.59□□□□□ -0.55
RPSA-202ENST00000443003 CADPS2Q86UW7 1296 aa11.59□□□□□ -0.55
RPSA-202ENST00000443003 ASXL1Q8IXJ9 1541 aa11.58□□□□□ -0.56
RPSA-202ENST00000443003 NCOA3Q9Y6Q9 1424 aa11.58□□□□□ -0.56
RPSA-202ENST00000443003 NHSL1Q5SYE7 1610 aa11.57□□□□□ -0.56
RPSA-202ENST00000443003 TBX22Q9Y458 520 aa11.57□□□□□ -0.56
RPSA-202ENST00000443003 XRN1Q8IZH2 1706 aaKnown RBP11.57□□□□□ -0.56
RPSA-202ENST00000443003 IQGAP3Q86VI3 1631 aa11.57□□□□□ -0.56
RPSA-202ENST00000443003 RXRBP28702 533 aa11.56□□□□□ -0.56
RPSA-202ENST00000443003 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.56□□□□□ -0.56
RPSA-202ENST00000443003 C19orf44Q9H6X5 657 aa11.56□□□□□ -0.56
RPSA-202ENST00000443003 NRXN3Q9Y4C0 1643 aa11.56□□□□□ -0.56
RPSA-202ENST00000443003 BRINP3Q76B58 766 aa11.55□□□□□ -0.56
RPSA-202ENST00000443003 AFF2P51816 1311 aa11.55□□□□□ -0.56
RPSA-202ENST00000443003 SPHKAPQ2M3C7 1700 aa11.55□□□□□ -0.56
RPSA-202ENST00000443003 NALCNQ8IZF0 1738 aa11.55□□□□□ -0.56
RPSA-202ENST00000443003 PIK3R4Q99570 1358 aa11.54□□□□□ -0.56
RPSA-202ENST00000443003 PTPRUQ92729 1446 aa11.54□□□□□ -0.56
RPSA-202ENST00000443003 AMOTL2Q9Y2J4 779 aa11.54□□□□□ -0.56
RPSA-202ENST00000443003 RGS12O14924 1447 aa11.53□□□□□ -0.56
RPSA-202ENST00000443003 CDK12Q9NYV4 1490 aaPredicted RBP11.53□□□□□ -0.56
RPSA-202ENST00000443003 C8orf37Q96NL8 207 aa11.53□□□□□ -0.56
RPSA-202ENST00000443003 DCCP43146 1447 aa11.52□□□□□ -0.56
RPSA-202ENST00000443003 MST1RQ04912 1400 aa11.52□□□□□ -0.57
RPSA-202ENST00000443003 SETBP1Q9Y6X0 1596 aa11.51□□□□□ -0.57
RPSA-202ENST00000443003 SETD5Q9C0A6 1442 aa11.51□□□□□ -0.57
RPSA-202ENST00000443003 DDX17Q92841 729 aaKnown RBP11.5□□□□□ -0.57
RPSA-202ENST00000443003 PNPLA6Q8IY17 1366 aa11.49□□□□□ -0.57
RPSA-202ENST00000443003 ZNF326Q5BKZ1 582 aaKnown RBP11.48□□□□□ -0.57
RPSA-202ENST00000443003 NUP155O75694 1391 aa11.48□□□□□ -0.57
RPSA-202ENST00000443003 ADGRL3Q9HAR2 1447 aa11.48□□□□□ -0.57
RPSA-202ENST00000443003 KIF1BO60333 1816 aa11.48□□□□□ -0.57
RPSA-202ENST00000443003 ADAMTS2O95450 1211 aa11.47□□□□□ -0.57
RPSA-202ENST00000443003 ADRA2BP18089 450 aa11.47□□□□□ -0.57
RPSA-202ENST00000443003 ITGAEP38570 1179 aa11.47□□□□□ -0.57
RPSA-202ENST00000443003 LRRC59Q96AG4 307 aaKnown RBP11.47□□□□□ -0.57
RPSA-202ENST00000443003 CLTCL1P53675 1640 aa11.46□□□□□ -0.57
RPSA-202ENST00000443003 METP08581 1390 aa11.46□□□□□ -0.57
RPSA-202ENST00000443003 RBM6P78332 1123 aaKnown RBP11.46□□□□□ -0.57
RPSA-202ENST00000443003 QTRT2Q9H974 415 aaKnown RBP11.46□□□□□ -0.57
RPSA-202ENST00000443003 NEXMIFQ5QGS0 1516 aa11.45□□□□□ -0.58
RPSA-202ENST00000443003 NGLY1Q96IV0 654 aa11.45□□□□□ -0.58
RPSA-202ENST00000443003 ROCK1Q13464 1354 aa11.44□□□□□ -0.58
RPSA-202ENST00000443003 ATAD2Q6PL18 1390 aa11.43□□□□□ -0.58
RPSA-202ENST00000443003 C1orf167Q5SNV9 1468 aa11.43□□□□□ -0.58
RPSA-202ENST00000443003 MARF1Q9Y4F3 1742 aaKnown RBP11.43□□□□□ -0.58
RPSA-202ENST00000443003 LAMC1P11047 1609 aa11.42□□□□□ -0.58
RPSA-202ENST00000443003 USP21Q9UK80 565 aa11.41□□□□□ -0.58
RPSA-202ENST00000443003 COL22A1Q8NFW1 1626 aaPredicted RBP11.4□□□□□ -0.58
RPSA-202ENST00000443003 PTCH1Q13635 1447 aa11.39□□□□□ -0.59
RPSA-202ENST00000443003 ORAI2Q96SN7 254 aa11.38□□□□□ -0.59
RPSA-202ENST00000443003 TRPC5Q9UL62 973 aaPredicted RBP11.38□□□□□ -0.59
RPSA-202ENST00000443003 PPLO60437 1756 aa11.38□□□□□ -0.59
RPSA-202ENST00000443003 ROBO2Q9HCK4 1378 aa11.38□□□□□ -0.59
RPSA-202ENST00000443003 SOS2Q07890 1332 aaPredicted RBP11.36□□□□□ -0.59
RPSA-202ENST00000443003 ATRNO75882 1429 aa11.36□□□□□ -0.59
RPSA-202ENST00000443003 ZRANB1Q9UGI0 708 aa11.36□□□□□ -0.59
RPSA-202ENST00000443003 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.35□□□□□ -0.59
RPSA-202ENST00000443003 PPARGC1BQ86YN6 1023 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms