RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 ARHGAP23Q9P227 1491 aa19.63■□□□□ 0.73
TM9SF4-204ENST00000442842 PPP1R15AO75807 674 aaPredicted RBP19.62■□□□□ 0.73
TM9SF4-204ENST00000442842 ZFYVE9O95405 1425 aa19.61■□□□□ 0.73
TM9SF4-204ENST00000442842 SENP3Q9H4L4 574 aaPredicted RBP19.61■□□□□ 0.73
TM9SF4-204ENST00000442842 SCAF11Q99590 1463 aaKnown RBP19.6■□□□□ 0.73
TM9SF4-204ENST00000442842 EID1Q9Y6B2 187 aa19.59■□□□□ 0.73
TM9SF4-204ENST00000442842 PPLO60437 1756 aa19.58■□□□□ 0.73
TM9SF4-204ENST00000442842 TXNDC2Q86VQ3 553 aa19.58■□□□□ 0.72
TM9SF4-204ENST00000442842 IFT172Q9UG01 1749 aa19.58■□□□□ 0.72
TM9SF4-204ENST00000442842 RPGRIP1LQ68CZ1 1315 aa19.57■□□□□ 0.72
TM9SF4-204ENST00000442842 NCKAP5LQ9HCH0 1330 aa19.57■□□□□ 0.72
TM9SF4-204ENST00000442842 POLR1AO95602 1720 aaPredicted RBP19.57■□□□□ 0.72
TM9SF4-204ENST00000442842 ANKLE2Q86XL3 938 aa19.57■□□□□ 0.72
TM9SF4-204ENST00000442842 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.57■□□□□ 0.72
TM9SF4-204ENST00000442842 DCAF11Q8TEB1 546 aa19.57■□□□□ 0.72
TM9SF4-204ENST00000442842 KDM2AQ9Y2K7 1162 aa19.57■□□□□ 0.72
TM9SF4-204ENST00000442842 LTKP29376 864 aa19.56■□□□□ 0.72
TM9SF4-204ENST00000442842 L3MBTL2Q969R5 705 aa19.56■□□□□ 0.72
TM9SF4-204ENST00000442842 MYOM2P54296 1465 aa19.55■□□□□ 0.72
TM9SF4-204ENST00000442842 HDGFP51858 240 aaKnown RBP19.55■□□□□ 0.72
TM9SF4-204ENST00000442842 BCANQ96GW7 911 aa19.55■□□□□ 0.72
TM9SF4-204ENST00000442842 ADGRF5Q8IZF2 1346 aa19.52■□□□□ 0.72
TM9SF4-204ENST00000442842 NPHP4O75161 1426 aaPredicted RBP19.52■□□□□ 0.72
TM9SF4-204ENST00000442842 VGFO15240 615 aaPredicted RBP19.52■□□□□ 0.72
TM9SF4-204ENST00000442842 PLEKHG1Q9ULL1 1385 aa19.52■□□□□ 0.72
TM9SF4-204ENST00000442842 IQGAP1P46940 1657 aa19.5■□□□□ 0.71
TM9SF4-204ENST00000442842 STRCQ7RTU9 1775 aa19.49■□□□□ 0.71
TM9SF4-204ENST00000442842 PIK3C2GO75747 1445 aa19.49■□□□□ 0.71
TM9SF4-204ENST00000442842 MED14O60244 1454 aa19.48■□□□□ 0.71
TM9SF4-204ENST00000442842 SETBP1Q9Y6X0 1596 aa19.48■□□□□ 0.71
TM9SF4-204ENST00000442842 NRXN1Q9ULB1 1477 aa19.48■□□□□ 0.71
TM9SF4-204ENST00000442842 PRAG1Q86YV5 1406 aa19.47■□□□□ 0.71
TM9SF4-204ENST00000442842 NRXN3Q9Y4C0 1643 aa19.47■□□□□ 0.71
TM9SF4-204ENST00000442842 SLC26A8Q96RN1 970 aa19.45■□□□□ 0.7
TM9SF4-204ENST00000442842 TIMELESSQ9UNS1 1208 aa19.45■□□□□ 0.7
TM9SF4-204ENST00000442842 ADAMTS13Q76LX8 1427 aa19.43■□□□□ 0.7
TM9SF4-204ENST00000442842 STAC3Q96MF2 364 aa19.43■□□□□ 0.7
TM9SF4-204ENST00000442842 DIP2AQ14689 1571 aa19.43■□□□□ 0.7
TM9SF4-204ENST00000442842 ALKQ9UM73 1620 aa19.43■□□□□ 0.7
TM9SF4-204ENST00000442842 LAMC1P11047 1609 aa19.42■□□□□ 0.7
TM9SF4-204ENST00000442842 CFAP70Q5T0N1 1121 aa19.41■□□□□ 0.7
TM9SF4-204ENST00000442842 NBPF8Q3BBV2 869 aa19.4■□□□□ 0.7
TM9SF4-204ENST00000442842 SETD1AO15047 1707 aaKnown RBP19.38■□□□□ 0.69
TM9SF4-204ENST00000442842 TRPM1Q7Z4N2 1603 aa19.38■□□□□ 0.69
TM9SF4-204ENST00000442842 ASXL1Q8IXJ9 1541 aa19.38■□□□□ 0.69
TM9SF4-204ENST00000442842 DMRT2Q9Y5R5 561 aa19.38■□□□□ 0.69
TM9SF4-204ENST00000442842 METP08581 1390 aa19.37■□□□□ 0.69
TM9SF4-204ENST00000442842 C14orf93Q9H972 538 aaKnown RBP19.36■□□□□ 0.69
TM9SF4-204ENST00000442842 RALGAPBQ86X10 1494 aa19.35■□□□□ 0.69
TM9SF4-204ENST00000442842 ROCK2O75116 1388 aaKnown RBP19.35■□□□□ 0.69
TM9SF4-204ENST00000442842 TMEM132EQ6IEE7 984 aa19.35■□□□□ 0.69
TM9SF4-204ENST00000442842 TBX22Q9Y458 520 aa19.35■□□□□ 0.69
TM9SF4-204ENST00000442842 KIAA1210Q9ULL0 1709 aa19.34■□□□□ 0.69
TM9SF4-204ENST00000442842 ADGRB1O14514 1584 aa19.33■□□□□ 0.69
TM9SF4-204ENST00000442842 NBPF1Q3BBV0 1214 aa19.33■□□□□ 0.68
TM9SF4-204ENST00000442842 PTPRUQ92729 1446 aa19.32■□□□□ 0.68
TM9SF4-204ENST00000442842 STK26Q9P289 416 aa19.31■□□□□ 0.68
TM9SF4-204ENST00000442842 ZNF335Q9H4Z2 1342 aaPredicted RBP19.3■□□□□ 0.68
TM9SF4-204ENST00000442842 ZEB1P37275 1124 aaPredicted RBP19.3■□□□□ 0.68
TM9SF4-204ENST00000442842 YTHDC2Q9H6S0 1430 aaKnown RBP19.3■□□□□ 0.68
TM9SF4-204ENST00000442842 NWD1Q149M9 1564 aa19.3■□□□□ 0.68
TM9SF4-204ENST00000442842 PIK3R4Q99570 1358 aa19.3■□□□□ 0.68
TM9SF4-204ENST00000442842 CARD11Q9BXL7 1154 aa19.28■□□□□ 0.68
TM9SF4-204ENST00000442842 AMOTL2Q9Y2J4 779 aa19.28■□□□□ 0.68
TM9SF4-204ENST00000442842 LRPPRCP42704 1394 aaKnown RBP19.28■□□□□ 0.68
TM9SF4-204ENST00000442842 XRN1Q8IZH2 1706 aaKnown RBP19.28■□□□□ 0.68
TM9SF4-204ENST00000442842 TRAK1Q9UPV9 953 aa19.26■□□□□ 0.67
TM9SF4-204ENST00000442842 GPRASP1Q5JY77 1395 aa19.25■□□□□ 0.67
TM9SF4-204ENST00000442842 KCNA6P17658 529 aa19.25■□□□□ 0.67
TM9SF4-204ENST00000442842 KNDC1Q76NI1 1749 aa19.25■□□□□ 0.67
TM9SF4-204ENST00000442842 CPS1P31327 1500 aa19.25■□□□□ 0.67
TM9SF4-204ENST00000442842 NKTRP30414 1462 aaKnown RBP19.24■□□□□ 0.67
TM9SF4-204ENST00000442842 CHD2O14647 1828 aaKnown RBP19.24■□□□□ 0.67
TM9SF4-204ENST00000442842 STRCP1A6NGW2 1772 aa19.24■□□□□ 0.67
TM9SF4-204ENST00000442842 PTCH1Q13635 1447 aa19.23■□□□□ 0.67
TM9SF4-204ENST00000442842 ROBO2Q9HCK4 1378 aa19.22■□□□□ 0.67
TM9SF4-204ENST00000442842 TECPR2O15040 1411 aa19.22■□□□□ 0.67
TM9SF4-204ENST00000442842 ABCC11Q96J66 1382 aa19.21■□□□□ 0.67
TM9SF4-204ENST00000442842 DLC1Q96QB1 1528 aa19.2■□□□□ 0.66
TM9SF4-204ENST00000442842 EIF3AQ14152 1382 aaKnown RBP19.2■□□□□ 0.66
TM9SF4-204ENST00000442842 ARHGEF28Q8N1W1 1705 aaKnown RBP19.2■□□□□ 0.66
TM9SF4-204ENST00000442842 RBM33Q96EV2 1170 aaKnown RBP19.2■□□□□ 0.66
TM9SF4-204ENST00000442842 PLEKHH1Q9ULM0 1364 aa19.19■□□□□ 0.66
TM9SF4-204ENST00000442842 SAFB2Q14151 953 aaKnown RBP eCLIP19.19■□□□□ 0.66
TM9SF4-204ENST00000442842 PRAM1Q96QH2 718 aa19.19■□□□□ 0.66
TM9SF4-204ENST00000442842 USP47Q96K76 1375 aa19.19■□□□□ 0.66
TM9SF4-204ENST00000442842 LTBP4Q8N2S1 1624 aa19.18■□□□□ 0.66
TM9SF4-204ENST00000442842 PROSER2Q86WR7 435 aaPredicted RBP19.18■□□□□ 0.66
TM9SF4-204ENST00000442842 POGKQ9P215 609 aa19.18■□□□□ 0.66
TM9SF4-204ENST00000442842 WAPLQ7Z5K2 1190 aa19.17■□□□□ 0.66
TM9SF4-204ENST00000442842 LRRC7Q96NW7 1537 aa19.16■□□□□ 0.66
TM9SF4-204ENST00000442842 C14orf37Q86TY3 774 aa19.16■□□□□ 0.66
TM9SF4-204ENST00000442842 TMEM94Q12767 1356 aa19.16■□□□□ 0.66
TM9SF4-204ENST00000442842 FAM135BQ49AJ0 1406 aa19.16■□□□□ 0.66
TM9SF4-204ENST00000442842 CENPJQ9HC77 1338 aaPredicted RBP19.15■□□□□ 0.66
TM9SF4-204ENST00000442842 QRICH2Q9H0J4 1663 aa19.14■□□□□ 0.65
TM9SF4-204ENST00000442842 NALCNQ8IZF0 1738 aa19.11■□□□□ 0.65
TM9SF4-204ENST00000442842 MINK1Q8N4C8 1332 aaPredicted RBP19.11■□□□□ 0.65
TM9SF4-204ENST00000442842 EIF4G2P78344 907 aaKnown RBP eCLIP19.11■□□□□ 0.652e-10■■■■□ 24
TM9SF4-204ENST00000442842 ADGRL3Q9HAR2 1447 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms