RNA–Protein interactions for RNA: ENST00000442522.6

CCDC66-208, Transcript of coiled-coil domain containing 66, humanhuman

TSL 5

Gene CCDC66, Length 2,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-208ENST00000442522 EID1Q9Y6B2 187 aa13.88□□□□□ -0.19
CCDC66-208ENST00000442522 VGFO15240 615 aaPredicted RBP13.87□□□□□ -0.19
CCDC66-208ENST00000442522 PPP1R15AO75807 674 aaPredicted RBP13.87□□□□□ -0.19
CCDC66-208ENST00000442522 TMEM2Q9UHN6 1383 aa13.87□□□□□ -0.19
CCDC66-208ENST00000442522 RIMS2Q9UQ26 1411 aa13.86□□□□□ -0.19
CCDC66-208ENST00000442522 KDM2AQ9Y2K7 1162 aa13.86□□□□□ -0.19
CCDC66-208ENST00000442522 AEBP2Q6ZN18 517 aaPredicted RBP13.85□□□□□ -0.19
CCDC66-208ENST00000442522 NEXMIFQ5QGS0 1516 aa13.85□□□□□ -0.19
CCDC66-208ENST00000442522 PPLO60437 1756 aa13.85□□□□□ -0.19
CCDC66-208ENST00000442522 SLIT1O75093 1534 aa13.85□□□□□ -0.19
CCDC66-208ENST00000442522 IFT172Q9UG01 1749 aa13.84□□□□□ -0.19
CCDC66-208ENST00000442522 MYOM2P54296 1465 aa13.84□□□□□ -0.19
CCDC66-208ENST00000442522 ARHGAP23Q9P227 1491 aa13.83□□□□□ -0.19
CCDC66-208ENST00000442522 TXNDC2Q86VQ3 553 aa13.83□□□□□ -0.2
CCDC66-208ENST00000442522 ANKLE2Q86XL3 938 aa13.83□□□□□ -0.2
CCDC66-208ENST00000442522 LMTK3Q96Q04 1460 aa13.83□□□□□ -0.2
CCDC66-208ENST00000442522 ZFYVE9O95405 1425 aa13.83□□□□□ -0.2
CCDC66-208ENST00000442522 NUTM2DQ5VT03 806 aaPredicted RBP13.81□□□□□ -0.2
CCDC66-208ENST00000442522 SCAF11Q99590 1463 aaKnown RBP13.81□□□□□ -0.2
CCDC66-208ENST00000442522 BCANQ96GW7 911 aa13.81□□□□□ -0.2
CCDC66-208ENST00000442522 ADGRF5Q8IZF2 1346 aa13.79□□□□□ -0.2
CCDC66-208ENST00000442522 PRAG1Q86YV5 1406 aa13.78□□□□□ -0.2
CCDC66-208ENST00000442522 PLEKHG1Q9ULL1 1385 aa13.78□□□□□ -0.2
CCDC66-208ENST00000442522 POLR1AO95602 1720 aaPredicted RBP13.78□□□□□ -0.2
CCDC66-208ENST00000442522 NRXN1Q9ULB1 1477 aa13.78□□□□□ -0.2
CCDC66-208ENST00000442522 LTKP29376 864 aa13.78□□□□□ -0.2
CCDC66-208ENST00000442522 HSPA2P54652 639 aa13.78□□□□□ -0.2
CCDC66-208ENST00000442522 PIK3C2GO75747 1445 aa13.77□□□□□ -0.21
CCDC66-208ENST00000442522 LAMC1P11047 1609 aa13.76□□□□□ -0.21
CCDC66-208ENST00000442522 SETBP1Q9Y6X0 1596 aa13.75□□□□□ -0.21
CCDC66-208ENST00000442522 NCKAP5LQ9HCH0 1330 aa13.74□□□□□ -0.21
CCDC66-208ENST00000442522 KIAA1210Q9ULL0 1709 aa13.74□□□□□ -0.21
CCDC66-208ENST00000442522 MED14O60244 1454 aa13.74□□□□□ -0.21
CCDC66-208ENST00000442522 NPHP4O75161 1426 aaPredicted RBP13.74□□□□□ -0.21
CCDC66-208ENST00000442522 IQGAP1P46940 1657 aa13.73□□□□□ -0.21
CCDC66-208ENST00000442522 NBPF8Q3BBV2 869 aa13.73□□□□□ -0.21
CCDC66-208ENST00000442522 C14orf93Q9H972 538 aaKnown RBP13.73□□□□□ -0.21
CCDC66-208ENST00000442522 DIP2AQ14689 1571 aa13.73□□□□□ -0.21
CCDC66-208ENST00000442522 ROCK2O75116 1388 aaKnown RBP13.73□□□□□ -0.21
CCDC66-208ENST00000442522 TRPM1Q7Z4N2 1603 aa13.72□□□□□ -0.21
CCDC66-208ENST00000442522 SENP3Q9H4L4 574 aaPredicted RBP13.72□□□□□ -0.21
CCDC66-208ENST00000442522 RALGAPBQ86X10 1494 aa13.72□□□□□ -0.21
CCDC66-208ENST00000442522 CFAP70Q5T0N1 1121 aa13.72□□□□□ -0.21
CCDC66-208ENST00000442522 DMRT2Q9Y5R5 561 aa13.72□□□□□ -0.21
CCDC66-208ENST00000442522 ALKQ9UM73 1620 aa13.72□□□□□ -0.21
CCDC66-208ENST00000442522 TBX22Q9Y458 520 aa13.7□□□□□ -0.22
CCDC66-208ENST00000442522 NRXN3Q9Y4C0 1643 aa13.7□□□□□ -0.22
CCDC66-208ENST00000442522 SLC26A8Q96RN1 970 aa13.69□□□□□ -0.22
CCDC66-208ENST00000442522 ADAMTS13Q76LX8 1427 aa13.69□□□□□ -0.22
CCDC66-208ENST00000442522 CARD11Q9BXL7 1154 aa13.69□□□□□ -0.22
CCDC66-208ENST00000442522 STRCQ7RTU9 1775 aa13.69□□□□□ -0.22
CCDC66-208ENST00000442522 PIK3R4Q99570 1358 aa13.67□□□□□ -0.22
CCDC66-208ENST00000442522 NBPF1Q3BBV0 1214 aa13.67□□□□□ -0.22
CCDC66-208ENST00000442522 GPRASP1Q5JY77 1395 aa13.67□□□□□ -0.22
CCDC66-208ENST00000442522 SETD1AO15047 1707 aaKnown RBP13.66□□□□□ -0.22
CCDC66-208ENST00000442522 EIF3AQ14152 1382 aaKnown RBP13.65□□□□□ -0.22
CCDC66-208ENST00000442522 TMEM132EQ6IEE7 984 aa13.65□□□□□ -0.22
CCDC66-208ENST00000442522 ADGRB1O14514 1584 aa13.65□□□□□ -0.22
CCDC66-208ENST00000442522 METP08581 1390 aa13.64□□□□□ -0.23
CCDC66-208ENST00000442522 YTHDC2Q9H6S0 1430 aaKnown RBP13.64□□□□□ -0.23
CCDC66-208ENST00000442522 STK26Q9P289 416 aa13.63□□□□□ -0.23
CCDC66-208ENST00000442522 LRPPRCP42704 1394 aaKnown RBP13.63□□□□□ -0.23
CCDC66-208ENST00000442522 ASXL1Q8IXJ9 1541 aa13.63□□□□□ -0.23
CCDC66-208ENST00000442522 EIF4G2P78344 907 aaKnown RBP eCLIP13.62□□□□□ -0.23
CCDC66-208ENST00000442522 TRAK1Q9UPV9 953 aa13.62□□□□□ -0.23
CCDC66-208ENST00000442522 AMOTL2Q9Y2J4 779 aa13.61□□□□□ -0.23
CCDC66-208ENST00000442522 ABCC11Q96J66 1382 aa13.61□□□□□ -0.23
CCDC66-208ENST00000442522 USP47Q96K76 1375 aa13.61□□□□□ -0.23
CCDC66-208ENST00000442522 KNDC1Q76NI1 1749 aa13.6□□□□□ -0.23
CCDC66-208ENST00000442522 KCNA6P17658 529 aa13.6□□□□□ -0.23
CCDC66-208ENST00000442522 CHD2O14647 1828 aaKnown RBP13.6□□□□□ -0.23
CCDC66-208ENST00000442522 POGKQ9P215 609 aa13.59□□□□□ -0.23
CCDC66-208ENST00000442522 DLC1Q96QB1 1528 aa13.59□□□□□ -0.23
CCDC66-208ENST00000442522 TECPR2O15040 1411 aa13.59□□□□□ -0.23
CCDC66-208ENST00000442522 SIRT1Q96EB6 747 aa13.58□□□□□ -0.24
CCDC66-208ENST00000442522 CPS1P31327 1500 aa13.58□□□□□ -0.24
CCDC66-208ENST00000442522 PTCH1Q13635 1447 aa13.58□□□□□ -0.24
CCDC66-208ENST00000442522 PTPRUQ92729 1446 aa13.58□□□□□ -0.24
CCDC66-208ENST00000442522 XRN1Q8IZH2 1706 aaKnown RBP13.58□□□□□ -0.24
CCDC66-208ENST00000442522 NWD1Q149M9 1564 aa13.58□□□□□ -0.24
CCDC66-208ENST00000442522 SLC24A1O60721 1099 aa13.58□□□□□ -0.24
CCDC66-208ENST00000442522 FAM135BQ49AJ0 1406 aa13.57□□□□□ -0.24
CCDC66-208ENST00000442522 CENPJQ9HC77 1338 aaPredicted RBP13.57□□□□□ -0.24
CCDC66-208ENST00000442522 ARHGEF28Q8N1W1 1705 aaKnown RBP13.57□□□□□ -0.24
CCDC66-208ENST00000442522 NKTRP30414 1462 aaKnown RBP13.57□□□□□ -0.24
CCDC66-208ENST00000442522 PRAM1Q96QH2 718 aa13.56□□□□□ -0.24
CCDC66-208ENST00000442522 HSPA5P11021 654 aaKnown RBP13.55□□□□□ -0.24
CCDC66-208ENST00000442522 ST20-MTHFSA0A0A6YYL1 179 aa13.55□□□□□ -0.24
CCDC66-208ENST00000442522 ROBO2Q9HCK4 1378 aa13.54□□□□□ -0.24
CCDC66-208ENST00000442522 PROSER2Q86WR7 435 aaPredicted RBP13.54□□□□□ -0.24
CCDC66-208ENST00000442522 ZNF335Q9H4Z2 1342 aaPredicted RBP13.53□□□□□ -0.24
CCDC66-208ENST00000442522 SAFB2Q14151 953 aaKnown RBP eCLIP13.53□□□□□ -0.24
CCDC66-208ENST00000442522 QRICH2Q9H0J4 1663 aa13.53□□□□□ -0.24
CCDC66-208ENST00000442522 WAPLQ7Z5K2 1190 aa13.52□□□□□ -0.24
CCDC66-208ENST00000442522 SBNO2Q9Y2G9 1366 aa13.52□□□□□ -0.25
CCDC66-208ENST00000442522 C14orf37Q86TY3 774 aa13.52□□□□□ -0.25
CCDC66-208ENST00000442522 TMF1P82094 1093 aa13.51□□□□□ -0.25
CCDC66-208ENST00000442522 NCOA3Q9Y6Q9 1424 aa13.5□□□□□ -0.25
CCDC66-208ENST00000442522 STRCP1A6NGW2 1772 aa13.5□□□□□ -0.25
CCDC66-208ENST00000442522 PLEKHH1Q9ULM0 1364 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms