RNA–Protein interactions for RNA: ENST00000442441.5

TMEM50B-204, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 982 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-204ENST00000442441 BCANQ96GW7 911 aa31.85■■■□□ 2.69
TMEM50B-204ENST00000442441 RPRD2Q5VT52 1461 aaKnown RBP31.83■■■□□ 2.69
TMEM50B-204ENST00000442441 MSH6P52701 1360 aa31.8■■■□□ 2.68
TMEM50B-204ENST00000442441 ANKRD50Q9ULJ7 1429 aa31.79■■■□□ 2.68
TMEM50B-204ENST00000442441 POTEAQ6S8J7 498 aa31.78■■■□□ 2.68
TMEM50B-204ENST00000442441 ZFYVE9O95405 1425 aa31.77■■■□□ 2.68
TMEM50B-204ENST00000442441 FAM50AQ14320 339 aaKnown RBP31.77■■■□□ 2.68
TMEM50B-204ENST00000442441 SLAIN2Q9P270 581 aa31.76■■■□□ 2.67
TMEM50B-204ENST00000442441 PLEKHG1Q9ULL1 1385 aa31.76■■■□□ 2.67
TMEM50B-204ENST00000442441 HDGFP51858 240 aaKnown RBP31.74■■■□□ 2.67
TMEM50B-204ENST00000442441 PPP1R15AO75807 674 aaPredicted RBP31.73■■■□□ 2.67
TMEM50B-204ENST00000442441 RIMS2Q9UQ26 1411 aa31.73■■■□□ 2.67
TMEM50B-204ENST00000442441 MYO5BQ9ULV0 1848 aa31.72■■■□□ 2.67
TMEM50B-204ENST00000442441 CHD2O14647 1828 aaKnown RBP31.71■■■□□ 2.67
TMEM50B-204ENST00000442441 GCC2Q8IWJ2 1684 aa31.7■■■□□ 2.67
TMEM50B-204ENST00000442441 TMEM131LA2VDJ0 1609 aa31.7■■■□□ 2.66
TMEM50B-204ENST00000442441 TBX22Q9Y458 520 aa31.68■■■□□ 2.66
TMEM50B-204ENST00000442441 PHLPP1O60346 1717 aa31.68■■■□□ 2.66
TMEM50B-204ENST00000442441 JCADQ9P266 1359 aa31.67■■■□□ 2.66
TMEM50B-204ENST00000442441 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.64■■■□□ 2.66
TMEM50B-204ENST00000442441 NCOA3Q9Y6Q9 1424 aa31.64■■■□□ 2.66
TMEM50B-204ENST00000442441 UNC13BO14795 1591 aa31.62■■■□□ 2.65
TMEM50B-204ENST00000442441 CHGAP10645 457 aaKnown RBP31.62■■■□□ 2.65
TMEM50B-204ENST00000442441 ADAMTS13Q76LX8 1427 aa31.58■■■□□ 2.65
TMEM50B-204ENST00000442441 COL16A1Q07092 1604 aaPredicted RBP31.58■■■□□ 2.65
TMEM50B-204ENST00000442441 C14orf37Q86TY3 774 aa31.58■■■□□ 2.65
TMEM50B-204ENST00000442441 E9PCH4 1651 aa31.57■■■□□ 2.64
TMEM50B-204ENST00000442441 NUTM2DQ5VT03 806 aaPredicted RBP31.56■■■□□ 2.64
TMEM50B-204ENST00000442441 DIP2AQ14689 1571 aa31.55■■■□□ 2.64
TMEM50B-204ENST00000442441 PIK3R4Q99570 1358 aa31.55■■■□□ 2.64
TMEM50B-204ENST00000442441 CADPS2Q86UW7 1296 aa31.53■■■□□ 2.64
TMEM50B-204ENST00000442441 C19orf44Q9H6X5 657 aa31.53■■■□□ 2.64
TMEM50B-204ENST00000442441 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.51■■■□□ 2.63
TMEM50B-204ENST00000442441 ROCK1Q13464 1354 aa31.51■■■□□ 2.63
TMEM50B-204ENST00000442441 SPATA31A6Q5VVP1 1343 aa31.5■■■□□ 2.63
TMEM50B-204ENST00000442441 IQGAP3Q86VI3 1631 aa31.5■■■□□ 2.63
TMEM50B-204ENST00000442441 ATF3P18847 181 aa31.5■■■□□ 2.63
TMEM50B-204ENST00000442441 SETD1AO15047 1707 aaKnown RBP31.49■■■□□ 2.63
TMEM50B-204ENST00000442441 LRP6O75581 1613 aa31.47■■■□□ 2.63
TMEM50B-204ENST00000442441 AHDC1Q5TGY3 1603 aaPredicted RBP31.47■■■□□ 2.63
TMEM50B-204ENST00000442441 TRPM2O94759 1503 aa31.46■■■□□ 2.63
TMEM50B-204ENST00000442441 AMOTL2Q9Y2J4 779 aa31.45■■■□□ 2.63
TMEM50B-204ENST00000442441 NUP155O75694 1391 aa31.44■■■□□ 2.62
TMEM50B-204ENST00000442441 MEX3CQ5U5Q3 659 aaKnown RBP31.44■■■□□ 2.62
TMEM50B-204ENST00000442441 PTPRUQ92729 1446 aa31.41■■■□□ 2.62
TMEM50B-204ENST00000442441 ZNF772Q68DY9 489 aaPredicted RBP31.41■■■□□ 2.62
TMEM50B-204ENST00000442441 SHPRHQ149N8 1683 aa31.41■■■□□ 2.62
TMEM50B-204ENST00000442441 BRINP3Q76B58 766 aa31.38■■■□□ 2.61
TMEM50B-204ENST00000442441 DCCP43146 1447 aa31.35■■■□□ 2.61
TMEM50B-204ENST00000442441 ITGAEP38570 1179 aa31.33■■■□□ 2.61
TMEM50B-204ENST00000442441 NRXN3Q9Y4C0 1643 aa31.32■■■□□ 2.6
TMEM50B-204ENST00000442441 SETBP1Q9Y6X0 1596 aa31.32■■■□□ 2.6
TMEM50B-204ENST00000442441 XRN1Q8IZH2 1706 aaKnown RBP31.32■■■□□ 2.6
TMEM50B-204ENST00000442441 TRIM52Q96A61 297 aa31.31■■■□□ 2.6
TMEM50B-204ENST00000442441 ASXL1Q8IXJ9 1541 aa31.29■■■□□ 2.6
TMEM50B-204ENST00000442441 NUTM2BA6NNL0 878 aaPredicted RBP31.28■■■□□ 2.6
TMEM50B-204ENST00000442441 NUTM2EB1AL46 878 aaPredicted RBP31.28■■■□□ 2.6
TMEM50B-204ENST00000442441 ZNF326Q5BKZ1 582 aaKnown RBP31.28■■■□□ 2.6
TMEM50B-204ENST00000442441 NUTM2AQ8IVF1 878 aaPredicted RBP31.28■■■□□ 2.6
TMEM50B-204ENST00000442441 UPF1Q92900 1129 aaKnown RBP eCLIP31.28■■■□□ 2.6
TMEM50B-204ENST00000442441 SPHKAPQ2M3C7 1700 aa31.27■■■□□ 2.6
TMEM50B-204ENST00000442441 MST1RQ04912 1400 aa31.27■■■□□ 2.6
TMEM50B-204ENST00000442441 RXRBP28702 533 aa31.26■■■□□ 2.59
TMEM50B-204ENST00000442441 METP08581 1390 aa31.26■■■□□ 2.59
TMEM50B-204ENST00000442441 SETD5Q9C0A6 1442 aa31.25■■■□□ 2.59
TMEM50B-204ENST00000442441 NHSL1Q5SYE7 1610 aa31.22■■■□□ 2.59
TMEM50B-204ENST00000442441 LRRC59Q96AG4 307 aaKnown RBP31.2■■■□□ 2.59
TMEM50B-204ENST00000442441 AFF2P51816 1311 aa31.2■■■□□ 2.58
TMEM50B-204ENST00000442441 ADGRL3Q9HAR2 1447 aa31.19■■■□□ 2.58
TMEM50B-204ENST00000442441 CDK12Q9NYV4 1490 aaPredicted RBP31.19■■■□□ 2.58
TMEM50B-204ENST00000442441 NEXMIFQ5QGS0 1516 aa31.15■■■□□ 2.58
TMEM50B-204ENST00000442441 CLTCL1P53675 1640 aa31.13■■■□□ 2.57
TMEM50B-204ENST00000442441 DDX17Q92841 729 aaKnown RBP31.13■■■□□ 2.57
TMEM50B-204ENST00000442441 PPARGC1BQ86YN6 1023 aaKnown RBP31.12■■■□□ 2.57
TMEM50B-204ENST00000442441 NALCNQ8IZF0 1738 aa31.12■■■□□ 2.57
TMEM50B-204ENST00000442441 PNPLA6Q8IY17 1366 aa31.11■■■□□ 2.57
TMEM50B-204ENST00000442441 C8orf37Q96NL8 207 aa31.1■■■□□ 2.57
TMEM50B-204ENST00000442441 C1orf167Q5SNV9 1468 aa31.07■■■□□ 2.56
TMEM50B-204ENST00000442441 KIF1BO60333 1816 aa31.06■■■□□ 2.56
TMEM50B-204ENST00000442441 QTRT2Q9H974 415 aaKnown RBP31.06■■■□□ 2.56
TMEM50B-204ENST00000442441 RBM6P78332 1123 aaKnown RBP31.04■■■□□ 2.56
TMEM50B-204ENST00000442441 PTCH1Q13635 1447 aa31.03■■■□□ 2.56
TMEM50B-204ENST00000442441 RGS12O14924 1447 aa31.02■■■□□ 2.56
TMEM50B-204ENST00000442441 VGFO15240 615 aaPredicted RBP31.01■■■□□ 2.55
TMEM50B-204ENST00000442441 LAMC1P11047 1609 aa31■■■□□ 2.55
TMEM50B-204ENST00000442441 NAIPQ13075 1403 aa30.99■■■□□ 2.55
TMEM50B-204ENST00000442441 ADAMTS2O95450 1211 aa30.99■■■□□ 2.55
TMEM50B-204ENST00000442441 NGLY1Q96IV0 654 aa30.99■■■□□ 2.55
TMEM50B-204ENST00000442441 ROBO2Q9HCK4 1378 aa30.99■■■□□ 2.55
TMEM50B-204ENST00000442441 ORAI2Q96SN7 254 aa30.97■■■□□ 2.55
TMEM50B-204ENST00000442441 SOS2Q07890 1332 aaPredicted RBP30.97■■■□□ 2.55
TMEM50B-204ENST00000442441 PRAG1Q86YV5 1406 aa30.95■■■□□ 2.54
TMEM50B-204ENST00000442441 RRBP1Q9P2E9 1410 aaKnown RBP30.94■■■□□ 2.54
TMEM50B-204ENST00000442441 RPGRIP1LQ68CZ1 1315 aa30.94■■■□□ 2.54
TMEM50B-204ENST00000442441 HFM1A2PYH4 1435 aa30.9■■■□□ 2.54
TMEM50B-204ENST00000442441 USP21Q9UK80 565 aa30.88■■■□□ 2.53
TMEM50B-204ENST00000442441 FNBP4Q8N3X1 1017 aaPredicted RBP30.85■■■□□ 2.53
TMEM50B-204ENST00000442441 SLC4A1APQ9BWU0 796 aaKnown RBP30.85■■■□□ 2.53
TMEM50B-204ENST00000442441 TRPC5Q9UL62 973 aaPredicted RBP30.85■■■□□ 2.53
TMEM50B-204ENST00000442441 PPLO60437 1756 aa30.84■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms