RNA–Protein interactions for RNA: ENST00000441778.6

LDB2-202, Transcript of LIM domain binding 2, humanhuman

TSL 1 (best) BASIC

Gene LDB2, Length 2,476 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-202ENST00000441778 WDR43Q15061 677 aaKnown RBP eCLIP11.68□□□□□ -0.54
LDB2-202ENST00000441778 MYOM1P52179 1685 aa11.67□□□□□ -0.54
LDB2-202ENST00000441778 SYNMO15061 1565 aa11.67□□□□□ -0.54
LDB2-202ENST00000441778 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.67□□□□□ -0.54
LDB2-202ENST00000441778 SLFN5Q08AF3 891 aa11.66□□□□□ -0.54
LDB2-202ENST00000441778 AMER1Q5JTC6 1135 aaPredicted RBP11.66□□□□□ -0.54
LDB2-202ENST00000441778 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.66□□□□□ -0.54
LDB2-202ENST00000441778 MADDQ8WXG6 1647 aa11.66□□□□□ -0.54
LDB2-202ENST00000441778 EIF3AQ14152 1382 aaKnown RBP11.66□□□□□ -0.54
LDB2-202ENST00000441778 FBLN2P98095 1184 aa11.66□□□□□ -0.54
LDB2-202ENST00000441778 SPINK5Q9NQ38 1064 aaPredicted RBP11.65□□□□□ -0.54
LDB2-202ENST00000441778 PLXNC1O60486 1568 aa11.65□□□□□ -0.54
LDB2-202ENST00000441778 ATP10AO60312 1499 aa11.65□□□□□ -0.54
LDB2-202ENST00000441778 TRMT2AQ8IZ69 625 aaKnown RBP11.65□□□□□ -0.54
LDB2-202ENST00000441778 KNSTRNQ9Y448 316 aa11.65□□□□□ -0.54
LDB2-202ENST00000441778 ASXL1Q8IXJ9 1541 aa11.65□□□□□ -0.55
LDB2-202ENST00000441778 USP19O94966 1318 aa11.64□□□□□ -0.55
LDB2-202ENST00000441778 TTC37Q6PGP7 1564 aa11.64□□□□□ -0.55
LDB2-202ENST00000441778 PIK3C2GO75747 1445 aa11.64□□□□□ -0.55
LDB2-202ENST00000441778 ABCC2Q92887 1545 aa11.64□□□□□ -0.55
LDB2-202ENST00000441778 CCDC146Q8IYE0 955 aa11.64□□□□□ -0.55
LDB2-202ENST00000441778 NKTRP30414 1462 aaKnown RBP11.64□□□□□ -0.55
LDB2-202ENST00000441778 BCAR3O75815 825 aa11.63□□□□□ -0.55
LDB2-202ENST00000441778 IGHDP01880 384 aa11.62□□□□□ -0.55
LDB2-202ENST00000441778 SPHKAPQ2M3C7 1700 aa11.62□□□□□ -0.55
LDB2-202ENST00000441778 RSPH4AQ5TD94 716 aa11.62□□□□□ -0.55
LDB2-202ENST00000441778 ARHGAP5Q13017 1502 aa11.62□□□□□ -0.55
LDB2-202ENST00000441778 NLRP1Q9C000 1473 aa11.61□□□□□ -0.55
LDB2-202ENST00000441778 DMRT2Q9Y5R5 561 aa11.6□□□□□ -0.55
LDB2-202ENST00000441778 APAF1O14727 1248 aa11.6□□□□□ -0.55
LDB2-202ENST00000441778 SEC24BO95487 1268 aa11.6□□□□□ -0.55
LDB2-202ENST00000441778 DUOX2Q9NRD8 1548 aa11.59□□□□□ -0.55
LDB2-202ENST00000441778 CEP152O94986 1710 aa11.59□□□□□ -0.55
LDB2-202ENST00000441778 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.59□□□□□ -0.55
LDB2-202ENST00000441778 KDM5AP29375 1690 aaKnown RBP11.59□□□□□ -0.55
LDB2-202ENST00000441778 POGKQ9P215 609 aa11.59□□□□□ -0.55
LDB2-202ENST00000441778 FAM43AQ8N2R8 423 aa11.58□□□□□ -0.56
LDB2-202ENST00000441778 SCAF11Q99590 1463 aaKnown RBP11.58□□□□□ -0.56
LDB2-202ENST00000441778 NPC1L1Q9UHC9 1359 aa11.57□□□□□ -0.56
LDB2-202ENST00000441778 ERCC6Q03468 1493 aa11.57□□□□□ -0.56
LDB2-202ENST00000441778 E9PSI1 815 aa11.57□□□□□ -0.56
LDB2-202ENST00000441778 CGNL1Q0VF96 1302 aa11.56□□□□□ -0.56
LDB2-202ENST00000441778 EIF5BO60841 1220 aaKnown RBP11.55□□□□□ -0.56
LDB2-202ENST00000441778 CLTCL1P53675 1640 aa11.55□□□□□ -0.56
LDB2-202ENST00000441778 SCAPERQ9BY12 1400 aa11.55□□□□□ -0.56
LDB2-202ENST00000441778 MAPK8IP3Q9UPT6 1336 aa11.55□□□□□ -0.56
LDB2-202ENST00000441778 CDCA8Q53HL2 280 aa11.55□□□□□ -0.56
LDB2-202ENST00000441778 PANK1Q8TE04 598 aa11.55□□□□□ -0.56
LDB2-202ENST00000441778 CLUAP1Q96AJ1 413 aa11.55□□□□□ -0.56
LDB2-202ENST00000441778 TRPM2O94759 1503 aa11.55□□□□□ -0.56
LDB2-202ENST00000441778 PDE3AQ14432 1141 aa11.54□□□□□ -0.56
LDB2-202ENST00000441778 SLKQ9H2G2 1235 aaPredicted RBP11.54□□□□□ -0.56
LDB2-202ENST00000441778 COG6Q9Y2V7 657 aa11.54□□□□□ -0.56
LDB2-202ENST00000441778 UBE2Q2Q8WVN8 375 aa11.54□□□□□ -0.56
LDB2-202ENST00000441778 ANTXR1Q9H6X2 564 aa11.53□□□□□ -0.56
LDB2-202ENST00000441778 NINLQ9Y2I6 1382 aa11.53□□□□□ -0.56
LDB2-202ENST00000441778 CENPJQ9HC77 1338 aaPredicted RBP11.53□□□□□ -0.56
LDB2-202ENST00000441778 BECN1Q14457 450 aa11.53□□□□□ -0.56
LDB2-202ENST00000441778 SHPRHQ149N8 1683 aa11.53□□□□□ -0.56
LDB2-202ENST00000441778 KIAA1210Q9ULL0 1709 aa11.53□□□□□ -0.56
LDB2-202ENST00000441778 RSPH6AQ9H0K4 717 aa11.52□□□□□ -0.57
LDB2-202ENST00000441778 ERVK-7P63135 1459 aa11.51□□□□□ -0.57
LDB2-202ENST00000441778 CANXP27824 592 aaKnown RBP11.51□□□□□ -0.57
LDB2-202ENST00000441778 CARD14Q9BXL6 1004 aa11.5□□□□□ -0.57
LDB2-202ENST00000441778 RRAGDQ9NQL2 400 aaPredicted RBP11.5□□□□□ -0.57
LDB2-202ENST00000441778 WWC1Q8IX03 1113 aa11.5□□□□□ -0.57
LDB2-202ENST00000441778 TNNQ9UQP3 1299 aa11.5□□□□□ -0.57
LDB2-202ENST00000441778 TBC1D32Q96NH3 1257 aa11.49□□□□□ -0.57
LDB2-202ENST00000441778 ABCA6Q8N139 1617 aa11.49□□□□□ -0.57
LDB2-202ENST00000441778 SHROOM2Q13796 1616 aa11.49□□□□□ -0.57
LDB2-202ENST00000441778 ABCC1P33527 1531 aa11.49□□□□□ -0.57
LDB2-202ENST00000441778 PTPRTO14522 1441 aa11.49□□□□□ -0.57
LDB2-202ENST00000441778 RLBP1P12271 317 aa11.48□□□□□ -0.57
LDB2-202ENST00000441778 NGEFQ8N5V2 710 aa11.48□□□□□ -0.57
LDB2-202ENST00000441778 TBC1D2Q9BYX2 928 aa11.48□□□□□ -0.57
LDB2-202ENST00000441778 PCDHB15Q9Y5E8 787 aa11.48□□□□□ -0.57
LDB2-202ENST00000441778 IQSEC2Q5JU85 1478 aa11.48□□□□□ -0.57
LDB2-202ENST00000441778 DEPDC5O75140 1603 aa11.48□□□□□ -0.57
LDB2-202ENST00000441778 POLR3AO14802 1390 aaPredicted RBP11.47□□□□□ -0.57
LDB2-202ENST00000441778 L1TD1Q5T7N2 865 aaKnown RBP11.47□□□□□ -0.57
LDB2-202ENST00000441778 TET3O43151 1660 aa11.47□□□□□ -0.57
LDB2-202ENST00000441778 TRAPPC8Q9Y2L5 1435 aa11.47□□□□□ -0.57
LDB2-202ENST00000441778 RARSP54136 660 aaKnown RBP11.47□□□□□ -0.57
LDB2-202ENST00000441778 PMFBP1Q8TBY8 1022 aa11.47□□□□□ -0.57
LDB2-202ENST00000441778 PDZRN3Q9UPQ7 1066 aa11.47□□□□□ -0.57
LDB2-202ENST00000441778 MAP3K4Q9Y6R4 1608 aa11.47□□□□□ -0.57
LDB2-202ENST00000441778 ZMYM3Q14202 1370 aa11.46□□□□□ -0.57
LDB2-202ENST00000441778 RRP7AQ9Y3A4 280 aaKnown RBP11.46□□□□□ -0.58
LDB2-202ENST00000441778 MYO3AQ8NEV4 1616 aa11.45□□□□□ -0.58
LDB2-202ENST00000441778 IFT172Q9UG01 1749 aa11.45□□□□□ -0.58
LDB2-202ENST00000441778 RTEL1-TNFRSF6BF6WH68 1400 aa11.45□□□□□ -0.58
LDB2-202ENST00000441778 NEUROD2Q15784 382 aa11.45□□□□□ -0.58
LDB2-202ENST00000441778 BCL2L13Q9BXK5 485 aa11.45□□□□□ -0.58
LDB2-202ENST00000441778 UPF2Q9HAU5 1272 aaKnown RBP11.45□□□□□ -0.58
LDB2-202ENST00000441778 PLCH2O75038 1416 aa11.44□□□□□ -0.58
LDB2-202ENST00000441778 ZFYVE16Q7Z3T8 1539 aa11.44□□□□□ -0.58
LDB2-202ENST00000441778 STAC3Q96MF2 364 aa11.44□□□□□ -0.58
LDB2-202ENST00000441778 ARXQ96QS3 562 aa11.44□□□□□ -0.58
LDB2-202ENST00000441778 UGGT1Q9NYU2 1555 aa11.44□□□□□ -0.58
LDB2-202ENST00000441778 XRCC6P12956 609 aaKnown RBP eCLIP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms