RNA–Protein interactions for RNA: ENST00000441756.1

MCF2L-217, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 370 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-217ENST00000441756 MYO5BQ9ULV0 1848 aa22.59■■□□□ 1.21
MCF2L-217ENST00000441756 TRPM1Q7Z4N2 1603 aa22.58■■□□□ 1.21
MCF2L-217ENST00000441756 ZFYVE9O95405 1425 aa22.57■■□□□ 1.2
MCF2L-217ENST00000441756 UBR1Q8IWV7 1749 aa22.57■■□□□ 1.2
MCF2L-217ENST00000441756 NRXN1Q9ULB1 1477 aa22.57■■□□□ 1.2
MCF2L-217ENST00000441756 VGFO15240 615 aaPredicted RBP22.56■■□□□ 1.2
MCF2L-217ENST00000441756 PLPPR3Q6T4P5 718 aa22.56■■□□□ 1.2
MCF2L-217ENST00000441756 KIAA1210Q9ULL0 1709 aa22.56■■□□□ 1.2
MCF2L-217ENST00000441756 HDGFP51858 240 aaKnown RBP22.54■■□□□ 1.2
MCF2L-217ENST00000441756 ZNF142P52746 1687 aaPredicted RBP22.54■■□□□ 1.2
MCF2L-217ENST00000441756 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.53■■□□□ 1.2
MCF2L-217ENST00000441756 CEP170BQ9Y4F5 1589 aaPredicted RBP22.53■■□□□ 1.2
MCF2L-217ENST00000441756 LAMC1P11047 1609 aa22.53■■□□□ 1.2
MCF2L-217ENST00000441756 ROCK2O75116 1388 aaKnown RBP22.52■■□□□ 1.2
MCF2L-217ENST00000441756 RIMS2Q9UQ26 1411 aa22.52■■□□□ 1.2
MCF2L-217ENST00000441756 PIK3C2GO75747 1445 aa22.5■■□□□ 1.19
MCF2L-217ENST00000441756 SETD1BQ9UPS6 1966 aaKnown RBP22.5■■□□□ 1.19
MCF2L-217ENST00000441756 ADGRF5Q8IZF2 1346 aa22.49■■□□□ 1.19
MCF2L-217ENST00000441756 GPRASP1Q5JY77 1395 aa22.49■■□□□ 1.19
MCF2L-217ENST00000441756 THEMISQ8N1K5 641 aaPredicted RBP22.48■■□□□ 1.19
MCF2L-217ENST00000441756 TMEM2Q9UHN6 1383 aa22.48■■□□□ 1.19
MCF2L-217ENST00000441756 EIF4G2P78344 907 aaKnown RBP eCLIP22.47■■□□□ 1.19
MCF2L-217ENST00000441756 SLIT1O75093 1534 aa22.47■■□□□ 1.19
MCF2L-217ENST00000441756 ZNF316A6NFI3 1004 aaPredicted RBP22.46■■□□□ 1.19
MCF2L-217ENST00000441756 CARD11Q9BXL7 1154 aa22.46■■□□□ 1.19
MCF2L-217ENST00000441756 SETBP1Q9Y6X0 1596 aa22.45■■□□□ 1.18
MCF2L-217ENST00000441756 ARHGAP23Q9P227 1491 aa22.44■■□□□ 1.18
MCF2L-217ENST00000441756 EID1Q9Y6B2 187 aa22.43■■□□□ 1.18
MCF2L-217ENST00000441756 USP47Q96K76 1375 aa22.42■■□□□ 1.18
MCF2L-217ENST00000441756 C14orf93Q9H972 538 aaKnown RBP22.4■■□□□ 1.18
MCF2L-217ENST00000441756 KDM4FA0A1W2PPD8 638 aa22.39■■□□□ 1.17
MCF2L-217ENST00000441756 NUTM2DQ5VT03 806 aaPredicted RBP22.39■■□□□ 1.17
MCF2L-217ENST00000441756 CFAP70Q5T0N1 1121 aa22.38■■□□□ 1.17
MCF2L-217ENST00000441756 SCAF11Q99590 1463 aaKnown RBP22.38■■□□□ 1.17
MCF2L-217ENST00000441756 EIF3AQ14152 1382 aaKnown RBP22.38■■□□□ 1.17
MCF2L-217ENST00000441756 IQGAP1P46940 1657 aa22.37■■□□□ 1.17
MCF2L-217ENST00000441756 HSPA5P11021 654 aaKnown RBP22.37■■□□□ 1.17
MCF2L-217ENST00000441756 NBPF1Q3BBV0 1214 aa22.37■■□□□ 1.17
MCF2L-217ENST00000441756 PLEKHG1Q9ULL1 1385 aa22.37■■□□□ 1.17
MCF2L-217ENST00000441756 ALKQ9UM73 1620 aa22.35■■□□□ 1.17
MCF2L-217ENST00000441756 ADGRB1O14514 1584 aa22.34■■□□□ 1.17
MCF2L-217ENST00000441756 TXNDC2Q86VQ3 553 aa22.34■■□□□ 1.17
MCF2L-217ENST00000441756 DIP2AQ14689 1571 aa22.32■■□□□ 1.16
MCF2L-217ENST00000441756 NRXN3Q9Y4C0 1643 aa22.31■■□□□ 1.16
MCF2L-217ENST00000441756 ANKLE2Q86XL3 938 aa22.3■■□□□ 1.16
MCF2L-217ENST00000441756 BCANQ96GW7 911 aa22.3■■□□□ 1.16
MCF2L-217ENST00000441756 SETD1AO15047 1707 aaKnown RBP22.29■■□□□ 1.16
MCF2L-217ENST00000441756 ASXL1Q8IXJ9 1541 aa22.28■■□□□ 1.16
MCF2L-217ENST00000441756 LTKP29376 864 aa22.28■■□□□ 1.16
MCF2L-217ENST00000441756 POLR1AO95602 1720 aaPredicted RBP22.27■■□□□ 1.16
MCF2L-217ENST00000441756 SLC24A1O60721 1099 aa22.26■■□□□ 1.15
MCF2L-217ENST00000441756 YTHDC2Q9H6S0 1430 aaKnown RBP22.24■■□□□ 1.15
MCF2L-217ENST00000441756 ST20-MTHFSA0A0A6YYL1 179 aa22.24■■□□□ 1.15
MCF2L-217ENST00000441756 HIRIP3Q9BW71 556 aaPredicted RBP22.24■■□□□ 1.15
MCF2L-217ENST00000441756 ADAMTS13Q76LX8 1427 aa22.23■■□□□ 1.15
MCF2L-217ENST00000441756 TMEM132EQ6IEE7 984 aa22.23■■□□□ 1.15
MCF2L-217ENST00000441756 ARHGEF28Q8N1W1 1705 aaKnown RBP22.22■■□□□ 1.15
MCF2L-217ENST00000441756 LRPPRCP42704 1394 aaKnown RBP22.22■■□□□ 1.15
MCF2L-217ENST00000441756 MED14O60244 1454 aa22.22■■□□□ 1.15
MCF2L-217ENST00000441756 DLC1Q96QB1 1528 aa22.21■■□□□ 1.15
MCF2L-217ENST00000441756 KNDC1Q76NI1 1749 aa22.2■■□□□ 1.14
MCF2L-217ENST00000441756 TBX22Q9Y458 520 aa22.2■■□□□ 1.14
MCF2L-217ENST00000441756 SENP3Q9H4L4 574 aaPredicted RBP22.19■■□□□ 1.14
MCF2L-217ENST00000441756 TRAK1Q9UPV9 953 aa22.19■■□□□ 1.14
MCF2L-217ENST00000441756 CENPJQ9HC77 1338 aaPredicted RBP22.19■■□□□ 1.14
MCF2L-217ENST00000441756 SBNO2Q9Y2G9 1366 aa22.19■■□□□ 1.14
MCF2L-217ENST00000441756 NPHP4O75161 1426 aaPredicted RBP22.19■■□□□ 1.14
MCF2L-217ENST00000441756 LMTK3Q96Q04 1460 aa22.19■■□□□ 1.14
MCF2L-217ENST00000441756 ABCC11Q96J66 1382 aa22.18■■□□□ 1.14
MCF2L-217ENST00000441756 PIK3R4Q99570 1358 aa22.18■■□□□ 1.14
MCF2L-217ENST00000441756 METP08581 1390 aa22.17■■□□□ 1.14
MCF2L-217ENST00000441756 QRICH2Q9H0J4 1663 aa22.17■■□□□ 1.14
MCF2L-217ENST00000441756 TECPR2O15040 1411 aa22.16■■□□□ 1.14
MCF2L-217ENST00000441756 TMF1P82094 1093 aa22.16■■□□□ 1.14
MCF2L-217ENST00000441756 CPS1P31327 1500 aa22.16■■□□□ 1.14
MCF2L-217ENST00000441756 CCDC7Q96M83 1385 aa22.15■■□□□ 1.14
MCF2L-217ENST00000441756 CDCA8Q53HL2 280 aa22.14■■□□□ 1.13
MCF2L-217ENST00000441756 SLC26A8Q96RN1 970 aa22.14■■□□□ 1.13
MCF2L-217ENST00000441756 TESK2Q96S53 571 aa22.14■■□□□ 1.13
MCF2L-217ENST00000441756 STK26Q9P289 416 aa22.14■■□□□ 1.13
MCF2L-217ENST00000441756 FAM135BQ49AJ0 1406 aa22.13■■□□□ 1.13
MCF2L-217ENST00000441756 WASHC2AQ641Q2 1341 aa22.12■■□□□ 1.13
MCF2L-217ENST00000441756 SIRT1Q96EB6 747 aa22.11■■□□□ 1.13
MCF2L-217ENST00000441756 POGKQ9P215 609 aa22.11■■□□□ 1.13
MCF2L-217ENST00000441756 KIF7Q2M1P5 1343 aa22.1■■□□□ 1.13
MCF2L-217ENST00000441756 NCKAP5LQ9HCH0 1330 aa22.09■■□□□ 1.13
MCF2L-217ENST00000441756 XRN1Q8IZH2 1706 aaKnown RBP22.09■■□□□ 1.13
MCF2L-217ENST00000441756 PTCH1Q13635 1447 aa22.08■■□□□ 1.13
MCF2L-217ENST00000441756 DIEXFQ68CQ4 756 aaKnown RBP22.07■■□□□ 1.12
MCF2L-217ENST00000441756 PRAM1Q96QH2 718 aa22.07■■□□□ 1.12
MCF2L-217ENST00000441756 DISP3Q9P2K9 1392 aa22.07■■□□□ 1.12
MCF2L-217ENST00000441756 C11orf95C9JLR9 678 aaPredicted RBP22.06■■□□□ 1.12
MCF2L-217ENST00000441756 HSPA2P54652 639 aa22.06■■□□□ 1.12
MCF2L-217ENST00000441756 PTPRUQ92729 1446 aa22.06■■□□□ 1.12
MCF2L-217ENST00000441756 AMOTL2Q9Y2J4 779 aa22.04■■□□□ 1.12
MCF2L-217ENST00000441756 EVC2Q86UK5 1308 aa22.04■■□□□ 1.12
MCF2L-217ENST00000441756 CHD2O14647 1828 aaKnown RBP22.03■■□□□ 1.12
MCF2L-217ENST00000441756 POLR3GLQ9BT43 218 aa22.03■■□□□ 1.12
MCF2L-217ENST00000441756 DDX10Q13206 875 aaKnown RBP22.02■■□□□ 1.12
MCF2L-217ENST00000441756 NWD1Q149M9 1564 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms