RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 PDCL3Q9H2J4 239 aa9.54□□□□□ -0.88
HDAC9-214ENST00000441542 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.53□□□□□ -0.88
HDAC9-214ENST00000441542 CHMP5Q9NZZ3 219 aa9.53□□□□□ -0.88
HDAC9-214ENST00000441542 PDZRN3Q9UPQ7 1066 aa9.53□□□□□ -0.88
HDAC9-214ENST00000441542 MIA2Q96PC5 1412 aa9.53□□□□□ -0.88
HDAC9-214ENST00000441542 TNNT2P45379 298 aaPredicted RBP9.52□□□□□ -0.88
HDAC9-214ENST00000441542 HSCBQ8IWL3 235 aa9.52□□□□□ -0.88
HDAC9-214ENST00000441542 ANP32BQ92688 251 aaKnown RBP9.52□□□□□ -0.88
HDAC9-214ENST00000441542 DMRT2Q9Y5R5 561 aa9.52□□□□□ -0.88
HDAC9-214ENST00000441542 BCORL1Q5H9F3 1711 aa9.52□□□□□ -0.88
HDAC9-214ENST00000441542 ABCA5Q8WWZ7 1642 aa9.52□□□□□ -0.88
HDAC9-214ENST00000441542 MAGI1Q96QZ7 1491 aaPredicted RBP9.52□□□□□ -0.89
HDAC9-214ENST00000441542 CFAP43Q8NDM7 1665 aa9.52□□□□□ -0.89
HDAC9-214ENST00000441542 TPM2P07951 284 aa9.52□□□□□ -0.89
HDAC9-214ENST00000441542 HSP90AB1P08238 724 aaKnown RBP9.52□□□□□ -0.89
HDAC9-214ENST00000441542 XPCQ01831 940 aaPredicted RBP9.52□□□□□ -0.89
HDAC9-214ENST00000441542 C22orf23Q9BZE7 217 aa9.51□□□□□ -0.89
HDAC9-214ENST00000441542 TBC1D32Q96NH3 1257 aa9.5□□□□□ -0.89
HDAC9-214ENST00000441542 KNSTRNQ9Y448 316 aa9.5□□□□□ -0.89
HDAC9-214ENST00000441542 PBRM1Q86U86 1689 aa9.5□□□□□ -0.89
HDAC9-214ENST00000441542 MAPK8IP3Q9UPT6 1336 aa9.49□□□□□ -0.89
HDAC9-214ENST00000441542 NASPP49321 788 aaPredicted RBP9.49□□□□□ -0.89
HDAC9-214ENST00000441542 PCDHB15Q9Y5E8 787 aa9.49□□□□□ -0.89
HDAC9-214ENST00000441542 GAPVD1Q14C86 1478 aa9.49□□□□□ -0.89
HDAC9-214ENST00000441542 CUL7Q14999 1698 aa9.49□□□□□ -0.89
HDAC9-214ENST00000441542 CFDP1Q9UEE9 299 aaPredicted RBP9.48□□□□□ -0.89
HDAC9-214ENST00000441542 NUP155O75694 1391 aa9.48□□□□□ -0.89
HDAC9-214ENST00000441542 UQCRHLA0A096LP55 91 aa9.48□□□□□ -0.89
HDAC9-214ENST00000441542 UQCRHP07919 91 aa9.48□□□□□ -0.89
HDAC9-214ENST00000441542 HMGB1P09429 215 aaKnown RBP9.48□□□□□ -0.89
HDAC9-214ENST00000441542 RIPK4P57078 832 aa9.48□□□□□ -0.89
HDAC9-214ENST00000441542 SLFN5Q08AF3 891 aa9.48□□□□□ -0.89
HDAC9-214ENST00000441542 JARID2Q92833 1246 aaPredicted RBP9.48□□□□□ -0.89
HDAC9-214ENST00000441542 CENPJQ9HC77 1338 aaPredicted RBP9.48□□□□□ -0.89
HDAC9-214ENST00000441542 DDX11L8A8MPP1 907 aa9.48□□□□□ -0.89
HDAC9-214ENST00000441542 PER1O15534 1290 aaPredicted RBP9.48□□□□□ -0.89
HDAC9-214ENST00000441542 MAPK8IP2Q13387 824 aaPredicted RBP9.48□□□□□ -0.89
HDAC9-214ENST00000441542 ABCA10Q8WWZ4 1543 aa9.48□□□□□ -0.89
HDAC9-214ENST00000441542 TSC1Q92574 1164 aa9.48□□□□□ -0.89
HDAC9-214ENST00000441542 TNPO1Q92973 898 aaKnown RBP9.48□□□□□ -0.89
HDAC9-214ENST00000441542 FAM177BA6PVY3 158 aa9.47□□□□□ -0.89
HDAC9-214ENST00000441542 FOXD4L5Q5VV16 416 aaPredicted RBP9.47□□□□□ -0.89
HDAC9-214ENST00000441542 FOXD4L4Q8WXT5 416 aaPredicted RBP9.47□□□□□ -0.89
HDAC9-214ENST00000441542 PRDM4Q9UKN5 801 aa9.47□□□□□ -0.89
HDAC9-214ENST00000441542 PPP2R1AP30153 589 aa9.47□□□□□ -0.89
HDAC9-214ENST00000441542 PAXIP1Q6ZW49 1069 aaPredicted RBP9.47□□□□□ -0.89
HDAC9-214ENST00000441542 PARD3Q8TEW0 1356 aa9.47□□□□□ -0.89
HDAC9-214ENST00000441542 DNTTIP2Q5QJE6 756 aaKnown RBP9.46□□□□□ -0.89
HDAC9-214ENST00000441542 DDX49Q9Y6V7 483 aaKnown RBP9.46□□□□□ -0.89
HDAC9-214ENST00000441542 CALD1Q05682 793 aaKnown RBP9.46□□□□□ -0.89
HDAC9-214ENST00000441542 SNAPC4Q5SXM2 1469 aa9.46□□□□□ -0.9
HDAC9-214ENST00000441542 IGSF3O75054 1194 aa9.46□□□□□ -0.9
HDAC9-214ENST00000441542 RLBP1P12271 317 aa9.46□□□□□ -0.9
HDAC9-214ENST00000441542 TRHP20396 242 aaPredicted RBP9.45□□□□□ -0.9
HDAC9-214ENST00000441542 ZSCAN30Q86W11 494 aa9.45□□□□□ -0.9
HDAC9-214ENST00000441542 DISP3Q9P2K9 1392 aa9.44□□□□□ -0.9
HDAC9-214ENST00000441542 CGNL1Q0VF96 1302 aa9.44□□□□□ -0.9
HDAC9-214ENST00000441542 SSFA2P28290 1259 aa9.44□□□□□ -0.9
HDAC9-214ENST00000441542 RNF214Q8ND24 703 aa9.44□□□□□ -0.9
HDAC9-214ENST00000441542 GBP4Q96PP9 640 aa9.44□□□□□ -0.9
HDAC9-214ENST00000441542 CAVIN1Q6NZI2 390 aaKnown RBP9.44□□□□□ -0.9
HDAC9-214ENST00000441542 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.44□□□□□ -0.9
HDAC9-214ENST00000441542 EFCAB5A4FU69 1503 aa9.44□□□□□ -0.9
HDAC9-214ENST00000441542 CDK13Q14004 1512 aaKnown RBP9.44□□□□□ -0.9
HDAC9-214ENST00000441542 MAGI3Q5TCQ9 1506 aa9.43□□□□□ -0.9
HDAC9-214ENST00000441542 PTMAP06454 111 aaKnown RBP9.43□□□□□ -0.9
HDAC9-214ENST00000441542 TMF1P82094 1093 aa9.43□□□□□ -0.9
HDAC9-214ENST00000441542 HECW1Q76N89 1606 aa9.43□□□□□ -0.9
HDAC9-214ENST00000441542 CBX1P83916 185 aa9.43□□□□□ -0.9
HDAC9-214ENST00000441542 FTSJ3Q8IY81 847 aaKnown RBP9.43□□□□□ -0.9
HDAC9-214ENST00000441542 RBM42Q9BTD8 480 aaKnown RBP9.43□□□□□ -0.9
HDAC9-214ENST00000441542 GRIN2BQ13224 1484 aa9.43□□□□□ -0.9
HDAC9-214ENST00000441542 ABCC5O15440 1437 aa9.42□□□□□ -0.9
HDAC9-214ENST00000441542 DAPK1P53355 1430 aa9.42□□□□□ -0.9
HDAC9-214ENST00000441542 OFD1O75665 1012 aa9.42□□□□□ -0.9
HDAC9-214ENST00000441542 CHAMP1Q96JM3 812 aa9.42□□□□□ -0.9
HDAC9-214ENST00000441542 FOXD4L6Q3SYB3 417 aaPredicted RBP9.42□□□□□ -0.9
HDAC9-214ENST00000441542 MCTP1Q6DN14 999 aa9.42□□□□□ -0.9
HDAC9-214ENST00000441542 FOXD4L3Q6VB84 417 aaPredicted RBP9.42□□□□□ -0.9
HDAC9-214ENST00000441542 PMFBP1Q8TBY8 1022 aa9.42□□□□□ -0.9
HDAC9-214ENST00000441542 RWDD1Q9H446 243 aaPredicted RBP9.42□□□□□ -0.9
HDAC9-214ENST00000441542 KIAA1107Q9UPP5 1409 aa9.42□□□□□ -0.9
HDAC9-214ENST00000441542 CCDC173Q0VFZ6 552 aa9.41□□□□□ -0.9
HDAC9-214ENST00000441542 BBXQ8WY36 941 aaPredicted RBP9.41□□□□□ -0.9
HDAC9-214ENST00000441542 LNPKQ9C0E8 428 aa9.41□□□□□ -0.9
HDAC9-214ENST00000441542 E9PSI1 815 aa9.41□□□□□ -0.9
HDAC9-214ENST00000441542 JPH4Q96JJ6 628 aa9.41□□□□□ -0.9
HDAC9-214ENST00000441542 RBM27Q9P2N5 1060 aaKnown RBP9.41□□□□□ -0.9
HDAC9-214ENST00000441542 SUPT6HQ7KZ85 1726 aaKnown RBP9.41□□□□□ -0.9
HDAC9-214ENST00000441542 GOLGA6L22H0YM25 854 aa9.41□□□□□ -0.9
HDAC9-214ENST00000441542 ITPRIPQ8IWB1 547 aa9.4□□□□□ -0.9
HDAC9-214ENST00000441542 PHF23Q9BUL5 403 aaPredicted RBP9.4□□□□□ -0.9
HDAC9-214ENST00000441542 EIF3AQ14152 1382 aaKnown RBP9.4□□□□□ -0.9
HDAC9-214ENST00000441542 SENP3Q9H4L4 574 aaPredicted RBP9.4□□□□□ -0.91
HDAC9-214ENST00000441542 PPRC1Q5VV67 1664 aaKnown RBP9.4□□□□□ -0.91
HDAC9-214ENST00000441542 UGGT2Q9NYU1 1516 aa9.39□□□□□ -0.91
HDAC9-214ENST00000441542 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.39□□□□□ -0.91
HDAC9-214ENST00000441542 BLMP54132 1417 aaPredicted RBP9.39□□□□□ -0.91
HDAC9-214ENST00000441542 EHBP1L1Q8N3D4 1523 aa9.39□□□□□ -0.91
HDAC9-214ENST00000441542 CD2BP2O95400 341 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms