RNA–Protein interactions for RNA: ENST00000440978.1

EBF3-203, Transcript of early B cell factor 3, humanhuman

TSL 3

Gene EBF3, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-203ENST00000440978 EID1Q9Y6B2 187 aa17.48■□□□□ 0.39
EBF3-203ENST00000440978 DHX57Q6P158 1386 aaKnown RBP17.48■□□□□ 0.39
EBF3-203ENST00000440978 MED14O60244 1454 aa17.47■□□□□ 0.39
EBF3-203ENST00000440978 SCAF11Q99590 1463 aaKnown RBP17.47■□□□□ 0.39
EBF3-203ENST00000440978 ZFYVE9O95405 1425 aa17.47■□□□□ 0.39
EBF3-203ENST00000440978 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.46■□□□□ 0.39
EBF3-203ENST00000440978 RIMS2Q9UQ26 1411 aa17.46■□□□□ 0.39
EBF3-203ENST00000440978 NCKAP5LQ9HCH0 1330 aa17.46■□□□□ 0.38
EBF3-203ENST00000440978 TXNDC2Q86VQ3 553 aa17.45■□□□□ 0.38
EBF3-203ENST00000440978 SPATA31E1Q6ZUB1 1445 aa17.44■□□□□ 0.38
EBF3-203ENST00000440978 RPGRIP1LQ68CZ1 1315 aa17.44■□□□□ 0.38
EBF3-203ENST00000440978 ZNF326Q5BKZ1 582 aaKnown RBP17.43■□□□□ 0.38
EBF3-203ENST00000440978 NPHP4O75161 1426 aaPredicted RBP17.43■□□□□ 0.38
EBF3-203ENST00000440978 LTKP29376 864 aa17.42■□□□□ 0.38
EBF3-203ENST00000440978 IQGAP1P46940 1657 aa17.42■□□□□ 0.38
EBF3-203ENST00000440978 NEXMIFQ5QGS0 1516 aa17.42■□□□□ 0.38
EBF3-203ENST00000440978 PPP1R15AO75807 674 aaPredicted RBP17.4■□□□□ 0.38
EBF3-203ENST00000440978 PLEKHG1Q9ULL1 1385 aa17.4■□□□□ 0.38
EBF3-203ENST00000440978 PPLO60437 1756 aa17.38■□□□□ 0.37
EBF3-203ENST00000440978 IFT172Q9UG01 1749 aa17.36■□□□□ 0.37
EBF3-203ENST00000440978 VGFO15240 615 aaPredicted RBP17.36■□□□□ 0.37
EBF3-203ENST00000440978 RGL3Q3MIN7 710 aa17.35■□□□□ 0.37
EBF3-203ENST00000440978 DIP2AQ14689 1571 aa17.33■□□□□ 0.37
EBF3-203ENST00000440978 SETBP1Q9Y6X0 1596 aa17.33■□□□□ 0.37
EBF3-203ENST00000440978 CLSPNQ9HAW4 1339 aa17.33■□□□□ 0.36
EBF3-203ENST00000440978 NUTM2DQ5VT03 806 aaPredicted RBP17.33■□□□□ 0.36
EBF3-203ENST00000440978 STAC3Q96MF2 364 aa17.33■□□□□ 0.36
EBF3-203ENST00000440978 MYOM2P54296 1465 aa17.32■□□□□ 0.36
EBF3-203ENST00000440978 BCANQ96GW7 911 aa17.32■□□□□ 0.36
EBF3-203ENST00000440978 ADAMTS13Q76LX8 1427 aa17.3■□□□□ 0.36
EBF3-203ENST00000440978 NRXN3Q9Y4C0 1643 aa17.29■□□□□ 0.36
EBF3-203ENST00000440978 SIN3AQ96ST3 1273 aa17.29■□□□□ 0.36
EBF3-203ENST00000440978 TBX22Q9Y458 520 aa17.29■□□□□ 0.36
EBF3-203ENST00000440978 SLC26A8Q96RN1 970 aa17.28■□□□□ 0.36
EBF3-203ENST00000440978 NRXN1Q9ULB1 1477 aa17.28■□□□□ 0.36
EBF3-203ENST00000440978 PIK3R4Q99570 1358 aa17.27■□□□□ 0.35
EBF3-203ENST00000440978 ADGRF5Q8IZF2 1346 aa17.26■□□□□ 0.35
EBF3-203ENST00000440978 NEUROD1Q13562 356 aa17.26■□□□□ 0.35
EBF3-203ENST00000440978 DCAF11Q8TEB1 546 aa17.26■□□□□ 0.35
EBF3-203ENST00000440978 PIK3C2GO75747 1445 aa17.26■□□□□ 0.35
EBF3-203ENST00000440978 ZNF335Q9H4Z2 1342 aaPredicted RBP17.25■□□□□ 0.35
EBF3-203ENST00000440978 CCER1Q8TC90 406 aaPredicted RBP17.25■□□□□ 0.35
EBF3-203ENST00000440978 CPS1P31327 1500 aa17.24■□□□□ 0.35
EBF3-203ENST00000440978 LAMC1P11047 1609 aa17.24■□□□□ 0.35
EBF3-203ENST00000440978 LTBP4Q8N2S1 1624 aa17.24■□□□□ 0.35
EBF3-203ENST00000440978 ALKQ9UM73 1620 aa17.24■□□□□ 0.35
EBF3-203ENST00000440978 NWD1Q149M9 1564 aa17.23■□□□□ 0.35
EBF3-203ENST00000440978 SETD1AO15047 1707 aaKnown RBP17.22■□□□□ 0.35
EBF3-203ENST00000440978 KCNA6P17658 529 aa17.22■□□□□ 0.35
EBF3-203ENST00000440978 CHD2O14647 1828 aaKnown RBP17.21■□□□□ 0.35
EBF3-203ENST00000440978 TONSLQ96HA7 1378 aa17.21■□□□□ 0.35
EBF3-203ENST00000440978 L3MBTL2Q969R5 705 aa17.21■□□□□ 0.35
EBF3-203ENST00000440978 KDM2AQ9Y2K7 1162 aa17.21■□□□□ 0.35
EBF3-203ENST00000440978 NKTRP30414 1462 aaKnown RBP17.2■□□□□ 0.34
EBF3-203ENST00000440978 METP08581 1390 aa17.19■□□□□ 0.34
EBF3-203ENST00000440978 C14orf93Q9H972 538 aaKnown RBP17.19■□□□□ 0.34
EBF3-203ENST00000440978 STRCP1A6NGW2 1772 aa17.19■□□□□ 0.34
EBF3-203ENST00000440978 TIMELESSQ9UNS1 1208 aa17.18■□□□□ 0.34
EBF3-203ENST00000440978 PRAG1Q86YV5 1406 aa17.17■□□□□ 0.34
EBF3-203ENST00000440978 IQSEC2Q5JU85 1478 aa17.17■□□□□ 0.34
EBF3-203ENST00000440978 XRN1Q8IZH2 1706 aaKnown RBP17.16■□□□□ 0.34
EBF3-203ENST00000440978 KIAA1210Q9ULL0 1709 aa17.16■□□□□ 0.34
EBF3-203ENST00000440978 PTPRUQ92729 1446 aa17.16■□□□□ 0.34
EBF3-203ENST00000440978 MAPK8IP2Q13387 824 aaPredicted RBP17.15■□□□□ 0.34
EBF3-203ENST00000440978 CFAP70Q5T0N1 1121 aa17.15■□□□□ 0.34
EBF3-203ENST00000440978 AMOTL2Q9Y2J4 779 aa17.15■□□□□ 0.34
EBF3-203ENST00000440978 LRRC7Q96NW7 1537 aa17.15■□□□□ 0.34
EBF3-203ENST00000440978 CERKQ8TCT0 537 aa17.14■□□□□ 0.33
EBF3-203ENST00000440978 ASXL1Q8IXJ9 1541 aa17.14■□□□□ 0.33
EBF3-203ENST00000440978 PTCH1Q13635 1447 aa17.13■□□□□ 0.33
EBF3-203ENST00000440978 ADGRB1O14514 1584 aa17.12■□□□□ 0.33
EBF3-203ENST00000440978 LRPPRCP42704 1394 aaKnown RBP17.12■□□□□ 0.33
EBF3-203ENST00000440978 TECPR2O15040 1411 aa17.12■□□□□ 0.33
EBF3-203ENST00000440978 NCOA3Q9Y6Q9 1424 aa17.12■□□□□ 0.33
EBF3-203ENST00000440978 KNDC1Q76NI1 1749 aa17.11■□□□□ 0.33
EBF3-203ENST00000440978 ABCC11Q96J66 1382 aa17.11■□□□□ 0.33
EBF3-203ENST00000440978 YTHDC2Q9H6S0 1430 aaKnown RBP17.11■□□□□ 0.33
EBF3-203ENST00000440978 PROSER2Q86WR7 435 aaPredicted RBP17.1■□□□□ 0.33
EBF3-203ENST00000440978 TMEM132EQ6IEE7 984 aa17.09■□□□□ 0.33
EBF3-203ENST00000440978 TMEM94Q12767 1356 aa17.09■□□□□ 0.33
EBF3-203ENST00000440978 TRPM1Q7Z4N2 1603 aa17.08■□□□□ 0.32
EBF3-203ENST00000440978 XIRP1Q702N8 1843 aaKnown RBP17.07■□□□□ 0.32
EBF3-203ENST00000440978 SIRT1Q96EB6 747 aa17.07■□□□□ 0.32
EBF3-203ENST00000440978 DLC1Q96QB1 1528 aa17.06■□□□□ 0.32
EBF3-203ENST00000440978 ROBO2Q9HCK4 1378 aa17.06■□□□□ 0.32
EBF3-203ENST00000440978 FAM135BQ49AJ0 1406 aa17.05■□□□□ 0.32
EBF3-203ENST00000440978 STK26Q9P289 416 aa17.05■□□□□ 0.32
EBF3-203ENST00000440978 NBPF8Q3BBV2 869 aa17.04■□□□□ 0.32
EBF3-203ENST00000440978 RALGAPBQ86X10 1494 aa17.04■□□□□ 0.32
EBF3-203ENST00000440978 ROCK2O75116 1388 aaKnown RBP17.02■□□□□ 0.32
EBF3-203ENST00000440978 MSH6P52701 1360 aa17.02■□□□□ 0.32
EBF3-203ENST00000440978 GPRASP1Q5JY77 1395 aa17.02■□□□□ 0.32
EBF3-203ENST00000440978 NBPF1Q3BBV0 1214 aa17.02■□□□□ 0.32
EBF3-203ENST00000440978 C14orf37Q86TY3 774 aa17.01■□□□□ 0.31
EBF3-203ENST00000440978 RBM33Q96EV2 1170 aaKnown RBP17.01■□□□□ 0.31
EBF3-203ENST00000440978 C19orf44Q9H6X5 657 aa17.01■□□□□ 0.31
EBF3-203ENST00000440978 DCCP43146 1447 aa17.01■□□□□ 0.31
EBF3-203ENST00000440978 ADGRL3Q9HAR2 1447 aa17.01■□□□□ 0.31
EBF3-203ENST00000440978 TRAK1Q9UPV9 953 aa17■□□□□ 0.31
EBF3-203ENST00000440978 ARHGEF28Q8N1W1 1705 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms