RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 PLEKHG1Q9ULL1 1385 aa9.26□□□□□ -0.93
PTPRR-204ENST00000440835 PHF23Q9BUL5 403 aaPredicted RBP9.26□□□□□ -0.93
PTPRR-204ENST00000440835 PIK3R4Q99570 1358 aa9.26□□□□□ -0.93
PTPRR-204ENST00000440835 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.26□□□□□ -0.93
PTPRR-204ENST00000440835 ANKRD50Q9ULJ7 1429 aa9.26□□□□□ -0.93
PTPRR-204ENST00000440835 TMEM131LA2VDJ0 1609 aa9.25□□□□□ -0.93
PTPRR-204ENST00000440835 IQGAP3Q86VI3 1631 aa9.25□□□□□ -0.93
PTPRR-204ENST00000440835 LOC105371045A0A1W2PR82 267 aa9.25□□□□□ -0.93
PTPRR-204ENST00000440835 IDI1Q13907 227 aa9.25□□□□□ -0.93
PTPRR-204ENST00000440835 ZFYVE9O95405 1425 aa9.25□□□□□ -0.93
PTPRR-204ENST00000440835 PPARGC1BQ86YN6 1023 aaKnown RBP9.23□□□□□ -0.93
PTPRR-204ENST00000440835 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.23□□□□□ -0.93
PTPRR-204ENST00000440835 TMEM94Q12767 1356 aa9.23□□□□□ -0.93
PTPRR-204ENST00000440835 ROBO1Q9Y6N7 1651 aa9.23□□□□□ -0.93
PTPRR-204ENST00000440835 MSH6P52701 1360 aa9.23□□□□□ -0.93
PTPRR-204ENST00000440835 TBX22Q9Y458 520 aa9.23□□□□□ -0.93
PTPRR-204ENST00000440835 RIMS2Q9UQ26 1411 aa9.22□□□□□ -0.93
PTPRR-204ENST00000440835 MYO5BQ9ULV0 1848 aa9.21□□□□□ -0.93
PTPRR-204ENST00000440835 PROSER2Q86WR7 435 aaPredicted RBP9.21□□□□□ -0.93
PTPRR-204ENST00000440835 E9PCH4 1651 aa9.21□□□□□ -0.94
PTPRR-204ENST00000440835 TRPM2O94759 1503 aa9.21□□□□□ -0.94
PTPRR-204ENST00000440835 DAXXQ9UER7 740 aaPredicted RBP9.21□□□□□ -0.94
PTPRR-204ENST00000440835 PHLPP1O60346 1717 aa9.2□□□□□ -0.94
PTPRR-204ENST00000440835 DCCP43146 1447 aa9.19□□□□□ -0.94
PTPRR-204ENST00000440835 AHDC1Q5TGY3 1603 aaPredicted RBP9.19□□□□□ -0.94
PTPRR-204ENST00000440835 JCADQ9P266 1359 aa9.19□□□□□ -0.94
PTPRR-204ENST00000440835 CHIC2Q9UKJ5 165 aa9.18□□□□□ -0.94
PTPRR-204ENST00000440835 SHPRHQ149N8 1683 aa9.18□□□□□ -0.94
PTPRR-204ENST00000440835 SETBP1Q9Y6X0 1596 aa9.17□□□□□ -0.94
PTPRR-204ENST00000440835 SPATA31A6Q5VVP1 1343 aa9.17□□□□□ -0.94
PTPRR-204ENST00000440835 SPHKAPQ2M3C7 1700 aa9.17□□□□□ -0.94
PTPRR-204ENST00000440835 PPP1R15AO75807 674 aaPredicted RBP9.17□□□□□ -0.94
PTPRR-204ENST00000440835 FAM50AQ14320 339 aaKnown RBP9.17□□□□□ -0.94
PTPRR-204ENST00000440835 ERICH6Q7L0X2 663 aa9.17□□□□□ -0.94
PTPRR-204ENST00000440835 COL16A1Q07092 1604 aaPredicted RBP9.16□□□□□ -0.94
PTPRR-204ENST00000440835 CADPS2Q86UW7 1296 aa9.16□□□□□ -0.94
PTPRR-204ENST00000440835 SLAIN2Q9P270 581 aa9.16□□□□□ -0.94
PTPRR-204ENST00000440835 SLC26A8Q96RN1 970 aa9.16□□□□□ -0.94
PTPRR-204ENST00000440835 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.16□□□□□ -0.94
PTPRR-204ENST00000440835 ADAMTS13Q76LX8 1427 aa9.15□□□□□ -0.94
PTPRR-204ENST00000440835 XRN1Q8IZH2 1706 aaKnown RBP9.15□□□□□ -0.94
PTPRR-204ENST00000440835 BCANQ96GW7 911 aa9.14□□□□□ -0.95
PTPRR-204ENST00000440835 C19orf44Q9H6X5 657 aa9.14□□□□□ -0.95
PTPRR-204ENST00000440835 RGS17Q9UGC6 210 aaPredicted RBP9.13□□□□□ -0.95
PTPRR-204ENST00000440835 PRAG1Q86YV5 1406 aa9.13□□□□□ -0.95
PTPRR-204ENST00000440835 CDK12Q9NYV4 1490 aaPredicted RBP9.13□□□□□ -0.95
PTPRR-204ENST00000440835 SETD1AO15047 1707 aaKnown RBP9.12□□□□□ -0.95
PTPRR-204ENST00000440835 KIF1BO60333 1816 aa9.12□□□□□ -0.95
PTPRR-204ENST00000440835 NUP155O75694 1391 aa9.12□□□□□ -0.95
PTPRR-204ENST00000440835 LAMC1P11047 1609 aa9.12□□□□□ -0.95
PTPRR-204ENST00000440835 NHSL1Q5SYE7 1610 aa9.12□□□□□ -0.95
PTPRR-204ENST00000440835 ATF3P18847 181 aa9.12□□□□□ -0.95
PTPRR-204ENST00000440835 NRXN3Q9Y4C0 1643 aa9.12□□□□□ -0.95
PTPRR-204ENST00000440835 ZNF772Q68DY9 489 aaPredicted RBP9.11□□□□□ -0.95
PTPRR-204ENST00000440835 ACIN1Q9UKV3 1341 aaKnown RBP9.11□□□□□ -0.95
PTPRR-204ENST00000440835 SETD5Q9C0A6 1442 aa9.1□□□□□ -0.95
PTPRR-204ENST00000440835 RPGRIP1LQ68CZ1 1315 aa9.09□□□□□ -0.96
PTPRR-204ENST00000440835 NEXMIFQ5QGS0 1516 aa9.08□□□□□ -0.96
PTPRR-204ENST00000440835 ADGRL3Q9HAR2 1447 aa9.08□□□□□ -0.96
PTPRR-204ENST00000440835 RRBP1Q9P2E9 1410 aaKnown RBP9.08□□□□□ -0.96
PTPRR-204ENST00000440835 POTEAQ6S8J7 498 aa9.08□□□□□ -0.96
PTPRR-204ENST00000440835 C14orf37Q86TY3 774 aa9.08□□□□□ -0.96
PTPRR-204ENST00000440835 AMOTL2Q9Y2J4 779 aa9.08□□□□□ -0.96
PTPRR-204ENST00000440835 ASXL1Q8IXJ9 1541 aa9.08□□□□□ -0.96
PTPRR-204ENST00000440835 PTCH1Q13635 1447 aa9.08□□□□□ -0.96
PTPRR-204ENST00000440835 CHGAP10645 457 aaKnown RBP9.08□□□□□ -0.96
PTPRR-204ENST00000440835 PTPRUQ92729 1446 aa9.07□□□□□ -0.96
PTPRR-204ENST00000440835 CLTCL1P53675 1640 aa9.07□□□□□ -0.96
PTPRR-204ENST00000440835 MST1RQ04912 1400 aa9.07□□□□□ -0.96
PTPRR-204ENST00000440835 LRP6O75581 1613 aa9.05□□□□□ -0.96
PTPRR-204ENST00000440835 PCGF6Q9BYE7 350 aa9.05□□□□□ -0.96
PTPRR-204ENST00000440835 VGFO15240 615 aaPredicted RBP9.05□□□□□ -0.96
PTPRR-204ENST00000440835 LRRC59Q96AG4 307 aaKnown RBP9.05□□□□□ -0.96
PTPRR-204ENST00000440835 NALCNQ8IZF0 1738 aa9.05□□□□□ -0.96
PTPRR-204ENST00000440835 MEX3CQ5U5Q3 659 aaKnown RBP9.04□□□□□ -0.96
PTPRR-204ENST00000440835 BRINP3Q76B58 766 aa9.04□□□□□ -0.96
PTPRR-204ENST00000440835 HFM1A2PYH4 1435 aa9.04□□□□□ -0.96
PTPRR-204ENST00000440835 PPLO60437 1756 aa9.04□□□□□ -0.96
PTPRR-204ENST00000440835 NAIPQ13075 1403 aa9.03□□□□□ -0.96
PTPRR-204ENST00000440835 SENP3Q9H4L4 574 aaPredicted RBP9.03□□□□□ -0.96
PTPRR-204ENST00000440835 COL22A1Q8NFW1 1626 aaPredicted RBP9.03□□□□□ -0.96
PTPRR-204ENST00000440835 ZNF326Q5BKZ1 582 aaKnown RBP9.02□□□□□ -0.97
PTPRR-204ENST00000440835 METP08581 1390 aa9.02□□□□□ -0.97
PTPRR-204ENST00000440835 RBM33Q96EV2 1170 aaKnown RBP9.02□□□□□ -0.97
PTPRR-204ENST00000440835 CDC42BPGQ6DT37 1551 aa9.01□□□□□ -0.97
PTPRR-204ENST00000440835 RXRBP28702 533 aa9.01□□□□□ -0.97
PTPRR-204ENST00000440835 C1orf167Q5SNV9 1468 aa9.01□□□□□ -0.97
PTPRR-204ENST00000440835 KNDC1Q76NI1 1749 aa9.01□□□□□ -0.97
PTPRR-204ENST00000440835 PRKCSHP14314 528 aaPredicted RBP9□□□□□ -0.97
PTPRR-204ENST00000440835 FOXD1Q16676 465 aa9□□□□□ -0.97
PTPRR-204ENST00000440835 PNPLA6Q8IY17 1366 aa9□□□□□ -0.97
PTPRR-204ENST00000440835 TECPR2O15040 1411 aa8.99□□□□□ -0.97
PTPRR-204ENST00000440835 IFT172Q9UG01 1749 aa8.99□□□□□ -0.97
PTPRR-204ENST00000440835 SOS2Q07890 1332 aaPredicted RBP8.99□□□□□ -0.97
PTPRR-204ENST00000440835 LRPPRCP42704 1394 aaKnown RBP8.99□□□□□ -0.97
PTPRR-204ENST00000440835 ANKRD30BQ9BXX2 1392 aa8.99□□□□□ -0.97
PTPRR-204ENST00000440835 MARF1Q9Y4F3 1742 aaKnown RBP8.98□□□□□ -0.97
PTPRR-204ENST00000440835 RBM6P78332 1123 aaKnown RBP8.98□□□□□ -0.97
PTPRR-204ENST00000440835 NUTM2DQ5VT03 806 aaPredicted RBP8.98□□□□□ -0.97
PTPRR-204ENST00000440835 KIF1AQ12756 1690 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms